Wall clock time and date at job start Mon Mar 8 2021 06:38:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45195 * 109.47124 * 2 1 4 4 C 1.34232 * 116.99927 * 180.02562 * 3 2 1 5 5 O 1.20820 * 119.99791 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99882 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.85178 * 309.66385 * 6 4 3 8 8 C 1.53785 * 113.69000 * 80.93543 * 6 4 3 9 9 C 1.53777 * 87.08241 * 89.12299 * 8 6 4 10 10 F 1.39895 * 113.69560 * 270.87312 * 9 8 6 11 11 C 1.52999 * 113.61195 * 139.97738 * 9 8 6 12 12 N 1.46498 * 109.46770 * 87.50624 * 11 9 8 13 13 C 1.38407 * 119.99938 * 180.02562 * 12 11 9 14 14 N 1.32494 * 119.21691 * 359.72726 * 13 12 11 15 15 C 1.32285 * 120.73997 * 179.71899 * 14 13 12 16 16 C 1.38602 * 119.19507 * 0.55023 * 15 14 13 17 17 C 1.50696 * 120.72124 * 179.71275 * 16 15 14 18 18 O 1.42893 * 109.47690 * 120.01736 * 17 16 15 19 19 Si 1.86303 * 109.46863 * 0.02562 * 17 16 15 20 20 C 1.38601 * 118.56024 * 359.72083 * 16 15 14 21 21 N 1.32276 * 119.19944 * 0.02562 * 20 16 15 22 22 C 1.53781 * 113.61206 * 178.47078 * 6 4 3 23 23 H 1.08998 * 109.47094 * 180.02562 * 1 2 3 24 24 H 1.09007 * 109.46887 * 300.00022 * 1 2 3 25 25 H 1.08993 * 109.46867 * 59.99942 * 1 2 3 26 26 H 1.09001 * 109.46715 * 239.99284 * 2 1 3 27 27 H 1.09003 * 109.46911 * 120.00138 * 2 1 3 28 28 H 1.08999 * 113.61060 * 203.67722 * 8 6 4 29 29 H 1.08997 * 113.61198 * 334.57515 * 8 6 4 30 30 H 1.09005 * 109.47016 * 207.50089 * 11 9 8 31 31 H 1.08994 * 109.47189 * 327.50593 * 11 9 8 32 32 H 0.96999 * 120.00322 * 359.97438 * 12 11 9 33 33 H 1.07997 * 120.39932 * 180.25172 * 15 14 13 34 34 H 1.08997 * 109.46904 * 240.02127 * 17 16 15 35 35 H 0.96710 * 114.00209 * 299.99938 * 18 17 16 36 36 H 1.48501 * 110.00239 * 58.68448 * 19 17 16 37 37 H 1.48504 * 109.99743 * 180.02562 * 19 17 16 38 38 H 1.08001 * 120.40677 * 180.02562 * 20 16 15 39 39 H 1.09000 * 113.61578 * 25.34539 * 22 6 4 40 40 H 1.09001 * 113.61682 * 156.17118 * 22 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.4899 3.5733 -0.7744 8 6 3.9524 3.5935 1.3893 9 6 5.3426 2.9613 1.5695 10 9 5.3087 1.6770 2.1231 11 6 6.3489 3.8812 2.2638 12 7 6.2409 3.7158 3.7154 13 6 7.0570 4.4502 4.5582 14 7 7.9340 5.2945 4.0353 15 6 8.7250 6.0155 4.8128 16 6 8.6355 5.8708 6.1883 17 6 9.5242 6.6701 7.1060 18 8 8.7178 7.4761 7.9673 19 14 10.6374 7.7671 6.0919 20 6 7.7110 4.9747 6.7016 21 7 6.9465 4.2882 5.8686 22 6 5.4579 2.9682 0.0359 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8901 25 1 -0.3633 0.5138 -0.8899 26 1 1.8933 -0.5140 -0.8899 27 1 1.8934 -0.5139 0.8900 28 1 3.9689 4.6829 1.3577 29 1 3.2018 3.2003 2.0748 30 1 7.3583 3.6236 1.9428 31 1 6.1368 4.9171 1.9994 32 1 5.5971 3.0920 4.0859 33 1 9.4351 6.7050 4.3808 34 1 10.1309 5.9918 7.7058 35 1 8.1505 8.1050 7.5005 36 1 9.8220 8.6751 5.2458 37 1 11.5195 8.5604 6.9853 38 1 7.6158 4.8387 7.7687 39 1 5.9225 2.0701 -0.3711 40 1 5.8860 3.8861 -0.3670 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16501618_12175864.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:38:31 Heat of formation + Delta-G solvation = -72.166584 kcal Electronic energy + Delta-G solvation = -25599.791597 eV Core-core repulsion = 21525.481799 eV Total energy + Delta-G solvation = -4074.309798 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.132 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.85572 -42.08117 -41.72837 -39.39100 -38.30747 -37.43850 -36.56507 -34.71189 -32.88651 -32.61589 -29.77652 -27.33008 -26.83011 -26.05610 -25.37963 -23.81097 -23.08172 -22.35228 -20.65649 -19.62746 -18.76975 -18.65642 -18.21692 -17.73606 -17.45811 -17.02596 -16.89779 -16.65682 -16.35691 -16.13497 -15.81078 -15.53930 -15.22373 -15.04138 -14.61978 -14.56770 -14.53973 -14.11909 -14.01329 -13.77027 -13.57219 -13.17441 -13.14089 -12.92394 -12.72495 -12.52161 -12.26889 -11.86616 -11.77882 -11.69505 -11.59850 -11.51434 -11.43869 -11.29782 -10.74002 -10.04629 -9.16108 -5.04204 0.04946 0.15312 1.15958 1.20534 1.50821 1.55238 1.69245 1.90273 2.78036 2.81324 2.89723 3.03506 3.17344 3.21798 3.29260 3.40019 3.60732 3.69269 3.74450 3.78754 3.94794 3.99381 4.16280 4.19614 4.20093 4.28819 4.29420 4.46215 4.48449 4.53298 4.54943 4.68551 4.72534 4.73910 4.79349 4.99346 5.01238 5.16409 5.46645 5.69937 5.95383 6.32672 6.34851 6.75612 7.26273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.062 3.938 3 O -0.356 6.356 4 C 0.475 3.525 5 O -0.490 6.490 6 C -0.113 4.113 7 H 0.126 0.874 8 C -0.137 4.137 9 C 0.077 3.923 10 F -0.175 7.175 11 C 0.132 3.868 12 N -0.694 5.694 13 C 0.569 3.431 14 N -0.563 5.563 15 C 0.200 3.800 16 C -0.292 4.292 17 C -0.053 4.053 18 O -0.530 6.530 19 Si 0.678 3.322 20 C 0.224 3.776 21 N -0.567 5.567 22 C -0.131 4.131 23 H 0.082 0.918 24 H 0.067 0.933 25 H 0.067 0.933 26 H 0.071 0.929 27 H 0.071 0.929 28 H 0.120 0.880 29 H 0.091 0.909 30 H 0.084 0.916 31 H 0.091 0.909 32 H 0.419 0.581 33 H 0.168 0.832 34 H 0.121 0.879 35 H 0.376 0.624 36 H -0.257 1.257 37 H -0.253 1.253 38 H 0.171 0.829 39 H 0.103 0.897 40 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.624 2.666 -2.976 4.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.012 4.012 3 O -0.273 6.273 4 C 0.316 3.684 5 O -0.376 6.376 6 C -0.133 4.133 7 H 0.144 0.856 8 C -0.174 4.174 9 C 0.058 3.942 10 F -0.155 7.155 11 C 0.007 3.993 12 N -0.331 5.331 13 C 0.212 3.788 14 N -0.286 5.286 15 C 0.032 3.968 16 C -0.300 4.300 17 C -0.164 4.164 18 O -0.336 6.336 19 Si 0.579 3.421 20 C 0.056 3.944 21 N -0.289 5.289 22 C -0.169 4.169 23 H 0.101 0.899 24 H 0.086 0.914 25 H 0.086 0.914 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.139 0.861 29 H 0.109 0.891 30 H 0.103 0.897 31 H 0.109 0.891 32 H 0.257 0.743 33 H 0.184 0.816 34 H 0.138 0.862 35 H 0.223 0.777 36 H -0.182 1.182 37 H -0.178 1.178 38 H 0.188 0.812 39 H 0.121 0.879 40 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -0.484 2.228 -3.536 4.207 hybrid contribution -0.817 0.379 1.047 1.381 sum -1.301 2.607 -2.489 3.832 Atomic orbital electron populations 1.21824 0.92280 1.03305 1.03643 1.23096 0.95577 0.79651 1.02844 1.86475 1.24036 1.32907 1.83899 1.22893 0.80920 0.91663 0.72901 1.90713 1.60382 1.42556 1.43929 1.21999 0.97615 0.91966 1.01681 0.85556 1.23656 0.96374 1.02388 0.95009 1.22229 0.97130 0.80197 0.94679 1.92938 1.97201 1.39026 1.86330 1.21775 0.99611 0.99412 0.78525 1.43916 1.40202 1.44593 1.04427 1.19310 0.86925 0.86983 0.85566 1.67917 1.09299 1.11026 1.40343 1.22785 0.92325 0.92305 0.89350 1.21665 1.05674 1.06231 0.96466 1.24680 0.96763 0.97635 0.97369 1.86613 1.58171 1.53491 1.35299 0.95231 0.82414 0.82894 0.81561 1.22855 0.85974 0.85880 0.99712 1.67984 1.29178 1.29028 1.02669 1.23557 0.93695 1.06250 0.93381 0.89946 0.91376 0.91354 0.91042 0.91027 0.86149 0.89072 0.89737 0.89071 0.74306 0.81577 0.86165 0.77655 1.18208 1.17751 0.81171 0.87881 0.86130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.22 10.29 37.16 0.38 0.60 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.63 10.22 -39.26 -0.40 -1.04 16 4 C 0.47 0.98 6.90 36.01 0.25 1.23 16 5 O -0.49 -2.50 14.56 -18.75 -0.27 -2.77 16 6 C -0.11 0.19 4.45 -90.96 -0.40 -0.22 16 7 H 0.13 -0.49 8.14 -51.93 -0.42 -0.91 16 8 C -0.14 0.34 7.11 -25.92 -0.18 0.16 16 9 C 0.08 -0.07 1.73 -89.80 -0.16 -0.23 16 10 F -0.17 -0.51 14.97 2.25 0.03 -0.47 16 11 C 0.13 -0.15 5.40 -4.04 -0.02 -0.18 16 12 N -0.69 -0.65 5.60 -62.31 -0.35 -0.99 16 13 C 0.57 1.45 8.43 -322.80 -2.72 -1.27 16 14 N -0.56 -1.04 9.59 -13.93 -0.13 -1.17 16 15 C 0.20 -0.01 9.92 -17.22 -0.17 -0.18 16 16 C -0.29 0.09 5.40 -104.36 -0.56 -0.47 16 17 C -0.05 0.08 2.85 36.00 0.10 0.18 16 18 O -0.53 0.00 12.79 -35.23 -0.45 -0.45 16 19 Si 0.68 -1.44 29.87 -169.99 -5.08 -6.52 16 20 C 0.22 0.23 10.92 -17.23 -0.19 0.04 16 21 N -0.57 -1.69 10.46 -13.93 -0.15 -1.84 16 22 C -0.13 0.28 6.93 -25.91 -0.18 0.10 16 23 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 24 H 0.07 -0.09 8.14 -51.92 -0.42 -0.52 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 26 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 27 H 0.07 0.07 8.13 -51.93 -0.42 -0.36 16 28 H 0.12 -0.58 7.90 -51.93 -0.41 -0.99 16 29 H 0.09 -0.14 8.10 -51.93 -0.42 -0.56 16 30 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 -0.23 7.84 -51.93 -0.41 -0.63 16 32 H 0.42 0.40 8.14 -40.82 -0.33 0.07 16 33 H 0.17 -0.44 5.04 -52.49 -0.26 -0.70 16 34 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 35 H 0.38 -0.98 8.70 45.56 0.40 -0.59 16 36 H -0.26 0.08 7.11 56.52 0.40 0.48 16 37 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 38 H 0.17 -0.12 8.06 -52.49 -0.42 -0.54 16 39 H 0.10 -0.02 7.42 -51.93 -0.39 -0.40 16 40 H 0.12 -0.61 8.10 -51.93 -0.42 -1.04 16 LS Contribution 343.01 15.07 5.17 5.17 Total: 0.00 -8.91 343.01 -10.49 -19.40 By element: Atomic # 1 Polarization: -4.11 SS G_CDS: -5.24 Total: -9.35 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: -3.62 Total: 0.03 kcal Atomic # 7 Polarization: -3.38 SS G_CDS: -0.63 Total: -4.00 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -1.12 Total: -4.26 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 0.03 Total: -0.47 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.08 Total: -6.52 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -8.91 -10.49 -19.40 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16501618_12175864.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.770 kcal (2) G-P(sol) polarization free energy of solvation -8.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.678 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.488 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.396 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds