Wall clock time and date at job start Mon Mar 8 2021 06:38:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45206 * 109.47147 * 2 1 4 4 C 1.34228 * 117.00001 * 179.97438 * 3 2 1 5 5 O 1.20826 * 120.00094 * 0.02562 * 4 3 2 6 6 C 1.50703 * 120.00120 * 179.97438 * 4 3 2 7 7 H 1.08996 * 112.84916 * 309.67039 * 6 4 3 8 8 C 1.53785 * 113.61128 * 80.86345 * 6 4 3 9 9 C 1.54043 * 86.98376 * 89.16446 * 8 6 4 10 10 F 1.39904 * 113.69065 * 270.86985 * 9 8 6 11 11 C 1.53009 * 113.62140 * 139.97778 * 9 8 6 12 12 N 1.46496 * 109.46908 * 87.50032 * 11 9 8 13 13 C 1.39003 * 120.00014 * 180.02562 * 12 11 9 14 14 N 1.32387 * 119.71077 * 180.02562 * 13 12 11 15 15 C 1.31973 * 121.62879 * 180.02562 * 14 13 12 16 16 C 1.38028 * 120.85314 * 359.97438 * 15 14 13 17 17 C 1.50702 * 120.33635 * 180.02562 * 16 15 14 18 18 O 1.42901 * 109.47075 * 119.99437 * 17 16 15 19 19 Si 1.86304 * 109.46830 * 359.97438 * 17 16 15 20 20 C 1.38882 * 119.32605 * 0.02562 * 16 15 14 21 21 C 1.38298 * 118.50790 * 359.73156 * 20 16 15 22 22 C 1.53778 * 113.61394 * 178.47189 * 6 4 3 23 23 H 1.09002 * 109.47153 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.46832 * 60.00119 * 1 2 3 25 25 H 1.09004 * 109.47261 * 300.00100 * 1 2 3 26 26 H 1.08998 * 109.47533 * 119.99701 * 2 1 3 27 27 H 1.08996 * 109.47853 * 240.00044 * 2 1 3 28 28 H 1.09001 * 113.61211 * 203.66795 * 8 6 4 29 29 H 1.09001 * 113.61429 * 334.56939 * 8 6 4 30 30 H 1.09002 * 109.46992 * 207.50134 * 11 9 8 31 31 H 1.08997 * 109.46372 * 327.50414 * 11 9 8 32 32 H 0.96998 * 120.00549 * 0.02562 * 12 11 9 33 33 H 1.08004 * 119.57603 * 180.02562 * 15 14 13 34 34 H 1.08992 * 109.46625 * 239.99868 * 17 16 15 35 35 H 0.96698 * 113.99221 * 179.97438 * 18 17 16 36 36 H 1.48505 * 109.99977 * 298.68087 * 19 17 16 37 37 H 1.48491 * 110.00184 * 60.00294 * 19 17 16 38 38 H 1.08006 * 120.74283 * 180.02562 * 20 16 15 39 39 H 1.08006 * 120.44952 * 180.28640 * 21 20 16 40 40 H 1.09000 * 113.61770 * 25.43163 * 22 6 4 41 41 H 1.09001 * 113.60920 * 156.34018 * 22 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9208 2.9375 0.0000 7 1 3.4904 3.5732 -0.7737 8 6 3.9488 3.5930 1.3908 9 6 5.3413 2.9597 1.5717 10 9 5.3070 1.6747 2.1238 11 6 6.3471 3.8788 2.2679 12 7 6.2380 3.7116 3.7192 13 6 7.0569 4.4482 4.5672 14 7 6.9538 4.2922 5.8778 15 6 7.7117 4.9722 6.7174 16 6 8.6460 5.8765 6.2543 17 6 9.5057 6.6463 7.2235 18 8 10.8822 6.3523 6.9767 19 14 9.0682 6.1558 8.9668 20 6 8.7857 6.0697 4.8861 21 6 7.9812 5.3392 4.0308 22 6 5.4578 2.9683 0.0383 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 0.5139 0.8900 26 1 1.8934 -0.5138 0.8900 27 1 1.8934 -0.5138 -0.8899 28 1 3.9653 4.6824 1.3598 29 1 3.1964 3.1994 2.0743 30 1 7.3567 3.6216 1.9474 31 1 6.1351 4.9150 2.0046 32 1 5.5944 3.0869 4.0885 33 1 7.6000 4.8185 7.7806 34 1 9.3332 7.7145 7.0929 35 1 11.4947 6.8146 7.5651 36 1 7.6475 6.4861 9.2460 37 1 9.2985 4.7014 9.1581 38 1 9.5098 6.7713 4.4987 39 1 8.0668 5.4613 2.9611 40 1 5.9228 2.0708 -0.3694 41 1 5.8860 3.8873 -0.3618 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16501618_13915762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:38:34 Heat of formation + Delta-G solvation = -87.807140 kcal Electronic energy + Delta-G solvation = -25449.303379 eV Core-core repulsion = 21439.741267 eV Total energy + Delta-G solvation = -4009.562113 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.137 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -48.87143 -41.76289 -41.35337 -39.39227 -38.01475 -37.41472 -36.47680 -33.53272 -32.75704 -31.99064 -29.59658 -27.34398 -26.68149 -25.47573 -24.82235 -23.78313 -22.53195 -22.15075 -20.66151 -19.09672 -18.60042 -18.47575 -18.15967 -17.69256 -17.48263 -17.01053 -16.72978 -16.52987 -16.40231 -15.69447 -15.59085 -15.32011 -15.02355 -14.94648 -14.63362 -14.45164 -14.20554 -14.10681 -13.85513 -13.74746 -13.68849 -13.58791 -13.17162 -12.94241 -12.75067 -12.53968 -12.35270 -11.97419 -11.67715 -11.62404 -11.52706 -11.43109 -11.22092 -10.73129 -10.57724 -10.19111 -8.75395 -4.97670 0.21779 0.42290 1.14104 1.30477 1.53318 1.65525 1.90589 1.99287 2.74417 2.80334 2.89618 3.05047 3.14584 3.35717 3.44964 3.53950 3.72055 3.82212 3.93723 3.97973 3.98291 4.06146 4.09851 4.12260 4.23736 4.27856 4.28661 4.33859 4.41852 4.44114 4.50507 4.65661 4.70555 4.71724 4.78479 4.95257 4.99227 4.99834 5.25618 5.44681 5.45120 5.91231 6.44868 6.64043 6.73760 7.12392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.062 3.938 3 O -0.356 6.356 4 C 0.474 3.526 5 O -0.490 6.490 6 C -0.113 4.113 7 H 0.127 0.873 8 C -0.136 4.136 9 C 0.079 3.921 10 F -0.174 7.174 11 C 0.122 3.878 12 N -0.722 5.722 13 C 0.408 3.592 14 N -0.537 5.537 15 C 0.152 3.848 16 C -0.190 4.190 17 C -0.055 4.055 18 O -0.548 6.548 19 Si 0.677 3.323 20 C -0.001 4.001 21 C -0.237 4.237 22 C -0.132 4.132 23 H 0.082 0.918 24 H 0.067 0.933 25 H 0.067 0.933 26 H 0.071 0.929 27 H 0.071 0.929 28 H 0.120 0.880 29 H 0.091 0.909 30 H 0.080 0.920 31 H 0.088 0.912 32 H 0.410 0.590 33 H 0.146 0.854 34 H 0.073 0.927 35 H 0.382 0.618 36 H -0.253 1.253 37 H -0.249 1.249 38 H 0.139 0.861 39 H 0.135 0.865 40 H 0.103 0.897 41 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.330 6.220 -1.413 6.388 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.012 4.012 3 O -0.273 6.273 4 C 0.316 3.684 5 O -0.376 6.376 6 C -0.132 4.132 7 H 0.145 0.855 8 C -0.174 4.174 9 C 0.061 3.939 10 F -0.154 7.154 11 C -0.004 4.004 12 N -0.355 5.355 13 C 0.172 3.828 14 N -0.254 5.254 15 C -0.006 4.006 16 C -0.195 4.195 17 C -0.167 4.167 18 O -0.354 6.354 19 Si 0.578 3.422 20 C -0.027 4.027 21 C -0.262 4.262 22 C -0.170 4.170 23 H 0.101 0.899 24 H 0.087 0.913 25 H 0.086 0.914 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.139 0.861 29 H 0.110 0.890 30 H 0.098 0.902 31 H 0.106 0.894 32 H 0.246 0.754 33 H 0.163 0.837 34 H 0.091 0.909 35 H 0.229 0.771 36 H -0.178 1.178 37 H -0.174 1.174 38 H 0.157 0.843 39 H 0.153 0.847 40 H 0.121 0.879 41 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -1.507 4.402 -1.245 4.817 hybrid contribution 0.158 0.023 -0.738 0.755 sum -1.349 4.426 -1.984 5.034 Atomic orbital electron populations 1.21824 0.92252 1.03321 1.03650 1.23099 0.95597 0.79619 1.02852 1.86474 1.23998 1.32940 1.83885 1.22888 0.80948 0.91654 0.72917 1.90717 1.60384 1.42563 1.43927 1.21992 0.97525 0.92012 1.01686 0.85525 1.23699 0.96345 1.02360 0.94970 1.22206 0.97056 0.80217 0.94463 1.92947 1.97178 1.38854 1.86390 1.21864 0.99565 0.99355 0.79595 1.44249 1.41591 1.45956 1.03738 1.18306 0.88335 0.88561 0.87556 1.67094 1.28364 1.27749 1.02164 1.22012 0.90571 0.90006 0.98009 1.20043 1.01348 1.03033 0.95032 1.24416 0.84350 1.00536 1.07406 1.86492 1.14620 1.72034 1.62254 0.95347 0.83649 0.83326 0.79835 1.21173 0.94568 0.95138 0.91793 1.21449 1.01165 1.02459 1.01159 1.23567 0.93830 1.06193 0.93419 0.89931 0.91347 0.91363 0.91030 0.91030 0.86134 0.89018 0.90219 0.89430 0.75383 0.83689 0.90928 0.77079 1.17789 1.17354 0.84329 0.84686 0.87853 0.86199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 10.29 37.16 0.38 0.58 16 2 C 0.06 0.05 6.19 37.16 0.23 0.28 16 3 O -0.36 -0.70 10.22 -39.25 -0.40 -1.10 16 4 C 0.47 1.07 6.89 36.01 0.25 1.32 16 5 O -0.49 -2.63 14.56 -18.75 -0.27 -2.90 16 6 C -0.11 0.18 4.45 -90.96 -0.40 -0.23 16 7 H 0.13 -0.49 8.14 -51.93 -0.42 -0.92 16 8 C -0.14 0.33 7.13 -25.78 -0.18 0.15 16 9 C 0.08 -0.07 1.73 -89.66 -0.16 -0.22 16 10 F -0.17 -0.59 14.97 2.25 0.03 -0.56 16 11 C 0.12 -0.20 4.64 -4.04 -0.02 -0.22 16 12 N -0.72 -1.00 5.62 -60.42 -0.34 -1.34 16 13 C 0.41 1.37 7.65 -155.03 -1.19 0.18 16 14 N -0.54 -2.87 10.39 -12.44 -0.13 -3.00 16 15 C 0.15 0.66 9.84 -17.57 -0.17 0.48 16 16 C -0.19 -0.54 5.43 -104.46 -0.57 -1.11 16 17 C -0.06 0.00 2.83 36.01 0.10 0.10 16 18 O -0.55 -0.13 12.76 -35.23 -0.45 -0.58 16 19 Si 0.68 -0.51 29.82 -169.99 -5.07 -5.58 16 20 C 0.00 0.00 9.77 -39.32 -0.38 -0.39 16 21 C -0.24 -0.39 9.33 -39.22 -0.37 -0.75 16 22 C -0.13 0.29 6.93 -25.92 -0.18 0.11 16 23 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 24 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 25 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.07 0.09 8.13 -51.93 -0.42 -0.34 16 27 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 28 H 0.12 -0.59 7.90 -51.93 -0.41 -1.00 16 29 H 0.09 -0.11 8.09 -51.93 -0.42 -0.53 16 30 H 0.08 -0.15 7.92 -51.93 -0.41 -0.56 16 31 H 0.09 -0.35 7.64 -51.93 -0.40 -0.75 16 32 H 0.41 0.85 8.15 -40.82 -0.33 0.52 16 33 H 0.15 0.51 4.88 -52.48 -0.26 0.25 16 34 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 35 H 0.38 -1.84 8.74 45.56 0.40 -1.44 16 36 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 37 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 38 H 0.14 0.00 8.06 -52.48 -0.42 -0.42 16 39 H 0.14 -0.15 6.71 -52.48 -0.35 -0.50 16 40 H 0.10 -0.02 7.42 -51.93 -0.39 -0.40 16 41 H 0.12 -0.66 8.10 -51.93 -0.42 -1.08 16 LS Contribution 346.05 15.07 5.21 5.21 Total: 0.00 -9.95 346.05 -9.63 -19.58 By element: Atomic # 1 Polarization: -4.46 SS G_CDS: -5.56 Total: -10.01 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -2.66 Total: 0.28 kcal Atomic # 7 Polarization: -3.87 SS G_CDS: -0.47 Total: -4.34 kcal Atomic # 8 Polarization: -3.46 SS G_CDS: -1.12 Total: -4.58 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.03 Total: -0.56 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.07 Total: -5.58 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -9.95 -9.63 -19.58 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16501618_13915762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.231 kcal (2) G-P(sol) polarization free energy of solvation -9.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds