Wall clock time and date at job start Mon Mar 8 2021 06:38:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45206 * 109.47147 * 2 1 4 4 C 1.34228 * 117.00001 * 179.97438 * 3 2 1 5 5 O 1.20826 * 120.00094 * 0.02562 * 4 3 2 6 6 C 1.50703 * 120.00120 * 179.97438 * 4 3 2 7 7 H 1.08996 * 112.84916 * 309.67039 * 6 4 3 8 8 C 1.53785 * 113.61128 * 80.86345 * 6 4 3 9 9 C 1.54043 * 86.98376 * 89.16446 * 8 6 4 10 10 F 1.39904 * 113.69065 * 270.86985 * 9 8 6 11 11 C 1.53009 * 113.62140 * 139.97778 * 9 8 6 12 12 N 1.46496 * 109.46908 * 87.50032 * 11 9 8 13 13 C 1.39003 * 120.00014 * 180.02562 * 12 11 9 14 14 N 1.32387 * 119.71077 * 180.02562 * 13 12 11 15 15 C 1.31973 * 121.62879 * 180.02562 * 14 13 12 16 16 C 1.38028 * 120.85314 * 359.97438 * 15 14 13 17 17 C 1.50702 * 120.33635 * 180.02562 * 16 15 14 18 18 O 1.42901 * 109.47075 * 119.99437 * 17 16 15 19 19 Si 1.86304 * 109.46830 * 359.97438 * 17 16 15 20 20 C 1.38882 * 119.32605 * 0.02562 * 16 15 14 21 21 C 1.38298 * 118.50790 * 359.73156 * 20 16 15 22 22 C 1.53778 * 113.61394 * 178.47189 * 6 4 3 23 23 H 1.09002 * 109.47153 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.46832 * 60.00119 * 1 2 3 25 25 H 1.09004 * 109.47261 * 300.00100 * 1 2 3 26 26 H 1.08998 * 109.47533 * 119.99701 * 2 1 3 27 27 H 1.08996 * 109.47853 * 240.00044 * 2 1 3 28 28 H 1.09001 * 113.61211 * 203.66795 * 8 6 4 29 29 H 1.09001 * 113.61429 * 334.56939 * 8 6 4 30 30 H 1.09002 * 109.46992 * 207.50134 * 11 9 8 31 31 H 1.08997 * 109.46372 * 327.50414 * 11 9 8 32 32 H 0.96998 * 120.00549 * 0.02562 * 12 11 9 33 33 H 1.08004 * 119.57603 * 180.02562 * 15 14 13 34 34 H 1.08992 * 109.46625 * 239.99868 * 17 16 15 35 35 H 0.96698 * 113.99221 * 179.97438 * 18 17 16 36 36 H 1.48505 * 109.99977 * 298.68087 * 19 17 16 37 37 H 1.48491 * 110.00184 * 60.00294 * 19 17 16 38 38 H 1.08006 * 120.74283 * 180.02562 * 20 16 15 39 39 H 1.08006 * 120.44952 * 180.28640 * 21 20 16 40 40 H 1.09000 * 113.61770 * 25.43163 * 22 6 4 41 41 H 1.09001 * 113.60920 * 156.34018 * 22 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9208 2.9375 0.0000 7 1 3.4904 3.5732 -0.7737 8 6 3.9488 3.5930 1.3908 9 6 5.3413 2.9597 1.5717 10 9 5.3070 1.6747 2.1238 11 6 6.3471 3.8788 2.2679 12 7 6.2380 3.7116 3.7192 13 6 7.0569 4.4482 4.5672 14 7 6.9538 4.2922 5.8778 15 6 7.7117 4.9722 6.7174 16 6 8.6460 5.8765 6.2543 17 6 9.5057 6.6463 7.2235 18 8 10.8822 6.3523 6.9767 19 14 9.0682 6.1558 8.9668 20 6 8.7857 6.0697 4.8861 21 6 7.9812 5.3392 4.0308 22 6 5.4578 2.9683 0.0383 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 0.5139 0.8900 26 1 1.8934 -0.5138 0.8900 27 1 1.8934 -0.5138 -0.8899 28 1 3.9653 4.6824 1.3598 29 1 3.1964 3.1994 2.0743 30 1 7.3567 3.6216 1.9474 31 1 6.1351 4.9150 2.0046 32 1 5.5944 3.0869 4.0885 33 1 7.6000 4.8185 7.7806 34 1 9.3332 7.7145 7.0929 35 1 11.4947 6.8146 7.5651 36 1 7.6475 6.4861 9.2460 37 1 9.2985 4.7014 9.1581 38 1 9.5098 6.7713 4.4987 39 1 8.0668 5.4613 2.9611 40 1 5.9228 2.0708 -0.3694 41 1 5.8860 3.8873 -0.3618 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16501618_13915762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:38:33 Heat of formation + Delta-G solvation = -88.285891 kcal Electronic energy + Delta-G solvation = -25449.324140 eV Core-core repulsion = 21439.741267 eV Total energy + Delta-G solvation = -4009.582873 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.137 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -48.92874 -41.86302 -41.48810 -39.33940 -38.02032 -37.55817 -36.50333 -33.66003 -32.77594 -32.04328 -29.56046 -27.14679 -26.69370 -25.47645 -24.95007 -23.78545 -22.60800 -22.17924 -20.64012 -19.13448 -18.68990 -18.52110 -18.18245 -17.80762 -17.46709 -17.00150 -16.76848 -16.53794 -16.43271 -15.74802 -15.67214 -15.33823 -15.08941 -15.00358 -14.68384 -14.47283 -14.18086 -14.11788 -13.87228 -13.83023 -13.66590 -13.40911 -13.10119 -12.96125 -12.69638 -12.55334 -12.44698 -12.06088 -11.65289 -11.59340 -11.55613 -11.49832 -11.22890 -10.87188 -10.72424 -10.18548 -8.83977 -4.96564 0.05398 0.29486 1.01587 1.32953 1.52830 1.63603 1.88903 1.99084 2.67347 2.91666 3.04099 3.17901 3.29123 3.36101 3.48435 3.49206 3.74884 3.78549 3.88549 3.95122 3.96796 4.03466 4.22811 4.24854 4.31945 4.33619 4.43534 4.50079 4.56795 4.64564 4.65996 4.68930 4.79514 4.82005 4.84124 4.89499 5.05997 5.11719 5.17926 5.36990 5.37664 5.85883 6.29994 6.60247 6.94596 6.98360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.055 3.945 3 O -0.360 6.360 4 C 0.466 3.534 5 O -0.531 6.531 6 C -0.115 4.115 7 H 0.159 0.841 8 C -0.125 4.125 9 C 0.062 3.938 10 F -0.206 7.206 11 C 0.122 3.878 12 N -0.725 5.725 13 C 0.392 3.608 14 N -0.574 5.574 15 C 0.124 3.876 16 C -0.201 4.201 17 C -0.056 4.056 18 O -0.565 6.565 19 Si 0.766 3.234 20 C -0.006 4.006 21 C -0.231 4.231 22 C -0.122 4.122 23 H 0.096 0.904 24 H 0.072 0.928 25 H 0.067 0.933 26 H 0.060 0.940 27 H 0.068 0.932 28 H 0.157 0.843 29 H 0.074 0.926 30 H 0.084 0.916 31 H 0.123 0.877 32 H 0.402 0.598 33 H 0.137 0.863 34 H 0.100 0.900 35 H 0.404 0.596 36 H -0.290 1.290 37 H -0.305 1.305 38 H 0.163 0.837 39 H 0.167 0.833 40 H 0.077 0.923 41 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.250 8.922 -2.896 9.384 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.019 4.019 3 O -0.277 6.277 4 C 0.310 3.690 5 O -0.420 6.420 6 C -0.134 4.134 7 H 0.176 0.824 8 C -0.162 4.162 9 C 0.044 3.956 10 F -0.187 7.187 11 C -0.002 4.002 12 N -0.357 5.357 13 C 0.155 3.845 14 N -0.292 5.292 15 C -0.033 4.033 16 C -0.207 4.207 17 C -0.167 4.167 18 O -0.375 6.375 19 Si 0.674 3.326 20 C -0.032 4.032 21 C -0.255 4.255 22 C -0.160 4.160 23 H 0.114 0.886 24 H 0.091 0.909 25 H 0.086 0.914 26 H 0.079 0.921 27 H 0.087 0.913 28 H 0.175 0.825 29 H 0.093 0.907 30 H 0.102 0.898 31 H 0.140 0.860 32 H 0.236 0.764 33 H 0.154 0.846 34 H 0.118 0.882 35 H 0.255 0.745 36 H -0.217 1.217 37 H -0.233 1.233 38 H 0.180 0.820 39 H 0.184 0.816 40 H 0.096 0.904 41 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -0.909 7.145 -2.733 7.704 hybrid contribution -0.058 -0.916 -0.276 0.959 sum -0.967 6.229 -3.009 6.985 Atomic orbital electron populations 1.21822 0.90435 1.04308 1.03833 1.23226 0.97061 0.79379 1.02200 1.86490 1.24199 1.33365 1.83638 1.23836 0.80662 0.93044 0.71487 1.90694 1.61091 1.44278 1.45910 1.22174 0.98007 0.89916 1.03255 0.82374 1.23775 0.94624 1.04119 0.93669 1.22618 0.98576 0.78989 0.95465 1.92879 1.97392 1.41375 1.87029 1.22106 0.99585 1.00907 0.77622 1.44440 1.40990 1.45391 1.04842 1.18626 0.89239 0.89410 0.87187 1.67005 1.29626 1.28994 1.03598 1.22080 0.91959 0.91384 0.97858 1.20386 1.01169 1.02675 0.96429 1.24442 0.84233 1.01642 1.06390 1.86434 1.14807 1.72912 1.63301 0.94578 0.80631 0.79237 0.78204 1.21521 0.94878 0.95434 0.91343 1.21790 0.99867 1.01144 1.02747 1.23669 0.93240 1.07050 0.92025 0.88576 0.90872 0.91356 0.92147 0.91313 0.82490 0.90694 0.89829 0.85968 0.76355 0.84587 0.88186 0.74504 1.21720 1.23308 0.81983 0.81550 0.90410 0.81927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.31 10.29 71.98 0.74 1.05 16 2 C 0.05 0.18 6.19 71.98 0.45 0.62 16 3 O -0.36 -1.81 10.22 -51.40 -0.53 -2.34 16 4 C 0.47 2.63 6.89 71.24 0.49 3.12 16 5 O -0.53 -6.94 14.56 21.96 0.32 -6.62 16 6 C -0.11 0.48 4.45 -11.01 -0.05 0.43 16 7 H 0.16 -1.67 8.14 -2.39 -0.02 -1.69 16 8 C -0.12 0.76 7.13 31.21 0.22 0.98 16 9 C 0.06 -0.13 1.73 -10.17 -0.02 -0.14 16 10 F -0.21 -1.83 14.97 44.97 0.67 -1.16 16 11 C 0.12 -0.58 4.64 86.38 0.40 -0.18 16 12 N -0.72 -2.23 5.62 -345.07 -1.94 -4.17 16 13 C 0.39 2.77 7.65 133.07 1.02 3.79 16 14 N -0.57 -7.27 10.39 -193.26 -2.01 -9.28 16 15 C 0.12 1.31 9.84 84.62 0.83 2.14 16 16 C -0.20 -1.17 5.43 -19.76 -0.11 -1.27 16 17 C -0.06 0.04 2.83 71.24 0.20 0.24 16 18 O -0.56 0.48 12.76 -148.98 -1.90 -1.42 16 19 Si 0.77 -0.45 29.82 68.60 2.05 1.59 16 20 C -0.01 -0.02 9.77 22.44 0.22 0.20 16 21 C -0.23 -0.43 9.33 22.50 0.21 -0.22 16 22 C -0.12 0.70 6.93 31.12 0.22 0.91 16 23 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 24 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 25 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 26 H 0.06 0.30 8.13 -2.39 -0.02 0.28 16 27 H 0.07 0.23 8.13 -2.39 -0.02 0.21 16 28 H 0.16 -2.12 7.90 -2.39 -0.02 -2.13 16 29 H 0.07 -0.16 8.09 -2.39 -0.02 -0.18 16 30 H 0.08 -0.45 7.92 -2.39 -0.02 -0.47 16 31 H 0.12 -1.43 7.64 -2.39 -0.02 -1.45 16 32 H 0.40 2.36 8.15 -92.71 -0.76 1.61 16 33 H 0.14 1.39 4.88 -2.91 -0.01 1.38 16 34 H 0.10 -0.58 7.96 -2.39 -0.02 -0.60 16 35 H 0.40 -4.62 8.74 -74.06 -0.65 -5.26 16 36 H -0.29 -1.49 7.11 99.48 0.71 -0.78 16 37 H -0.30 -2.56 7.11 99.48 0.71 -1.86 16 38 H 0.16 -0.44 8.06 -2.91 -0.02 -0.46 16 39 H 0.17 -0.90 6.71 -2.91 -0.02 -0.92 16 40 H 0.08 0.02 7.42 -2.39 -0.02 0.01 16 41 H 0.16 -2.39 8.10 -2.39 -0.02 -2.41 16 Total: 0.00 -28.51 346.05 1.19 -27.31 By element: Atomic # 1 Polarization: -15.30 SS G_CDS: -0.29 Total: -15.59 kcal Atomic # 6 Polarization: 6.85 SS G_CDS: 4.82 Total: 11.68 kcal Atomic # 7 Polarization: -9.50 SS G_CDS: -3.95 Total: -13.45 kcal Atomic # 8 Polarization: -8.28 SS G_CDS: -2.11 Total: -10.39 kcal Atomic # 9 Polarization: -1.83 SS G_CDS: 0.67 Total: -1.16 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: 2.05 Total: 1.59 kcal Total: -28.51 1.19 -27.31 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16501618_13915762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.971 kcal (2) G-P(sol) polarization free energy of solvation -28.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.479 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds