Wall clock time and date at job start Mon Mar 8 2021 07:08:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47112 * 2 1 4 4 C 1.50702 * 109.47221 * 120.00048 * 2 1 3 5 5 C 1.38608 * 120.71982 * 65.00468 * 4 2 1 6 6 N 1.32272 * 119.19709 * 180.02562 * 5 4 2 7 7 C 1.32491 * 120.74142 * 359.97438 * 6 5 4 8 8 N 1.38401 * 119.21719 * 179.97438 * 7 6 5 9 9 C 1.46507 * 120.00017 * 180.02562 * 8 7 6 10 10 H 1.08992 * 112.90438 * 336.25466 * 9 8 7 11 11 C 1.53778 * 113.61127 * 107.50857 * 9 8 7 12 12 C 1.53781 * 87.08476 * 89.11679 * 11 9 8 13 13 H 1.08995 * 113.68824 * 270.87391 * 12 11 9 14 14 C 1.53003 * 113.61564 * 139.97782 * 12 11 9 15 15 O 1.42900 * 109.46808 * 87.50402 * 14 12 11 16 16 C 1.35905 * 116.99657 * 179.97438 * 15 14 12 17 17 C 1.38737 * 120.05306 * 179.97438 * 16 15 14 18 18 C 1.38141 * 119.94079 * 179.97438 * 17 16 15 19 19 C 1.38269 * 120.05690 * 359.97438 * 18 17 16 20 20 C 1.38263 * 120.11156 * 0.27879 * 19 18 17 21 21 C 1.38143 * 120.05579 * 359.44992 * 20 19 18 22 22 C 1.53781 * 87.07967 * 25.43001 * 12 11 9 23 23 N 1.32495 * 121.56676 * 0.28469 * 7 6 5 24 24 C 1.32276 * 120.73847 * 359.43301 * 23 7 6 25 25 H 0.96702 * 113.99942 * 299.99748 * 1 2 3 26 26 H 1.09006 * 109.47297 * 240.00221 * 2 1 3 27 27 H 1.48493 * 110.00187 * 299.99988 * 3 2 1 28 28 H 1.48498 * 109.99727 * 61.32173 * 3 2 1 29 29 H 1.08005 * 120.40116 * 359.97438 * 5 4 2 30 30 H 0.97006 * 120.00387 * 0.02562 * 8 7 6 31 31 H 1.09000 * 113.61701 * 334.56201 * 11 9 8 32 32 H 1.09004 * 113.61456 * 203.66884 * 11 9 8 33 33 H 1.09002 * 109.46910 * 327.50417 * 14 12 11 34 34 H 1.08999 * 109.47085 * 207.50172 * 14 12 11 35 35 H 1.07999 * 120.02397 * 359.97438 * 17 16 15 36 36 H 1.07998 * 119.97174 * 180.02562 * 18 17 16 37 37 H 1.08002 * 119.94064 * 179.97438 * 19 18 17 38 38 H 1.08001 * 119.97271 * 179.71681 * 20 19 18 39 39 H 1.08006 * 120.03125 * 180.27333 * 21 20 19 40 40 H 1.09005 * 113.61399 * 89.11416 * 22 12 11 41 41 H 1.08998 * 113.61448 * 219.93464 * 22 12 11 42 42 H 1.07992 * 120.40638 * 180.25859 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6927 -2.0634 1.4139 6 7 2.1470 -2.6566 2.5054 7 6 2.8232 -1.9724 3.4165 8 7 3.2837 -2.6246 4.5470 9 6 4.0328 -1.8846 5.5656 10 1 4.5136 -0.9893 5.1717 11 6 3.2368 -1.6386 6.8582 12 6 3.7839 -2.9859 7.3584 13 1 3.1593 -3.8384 7.0915 14 6 4.1767 -2.9770 8.8371 15 8 3.0360 -3.3003 9.6349 16 6 3.2151 -3.3360 10.9816 17 6 2.1502 -3.6426 11.8163 18 6 2.3350 -3.6788 13.1848 19 6 3.5801 -3.4103 13.7228 20 6 4.6418 -3.0994 12.8934 21 6 4.4635 -3.0674 11.5239 22 6 4.9704 -2.7690 6.4045 23 7 3.0640 -0.6773 3.2739 24 6 2.6424 -0.0251 2.2031 25 1 -0.3933 0.4417 0.7651 26 1 1.7924 -0.5138 -0.8900 27 1 1.5615 2.4679 -1.2084 28 1 1.5879 2.4585 1.2243 29 1 1.1417 -2.6264 0.6750 30 1 3.1104 -3.5717 4.6650 31 1 2.1568 -1.6331 6.7115 32 1 3.5912 -0.7829 7.4330 33 1 4.5421 -1.9870 9.1100 34 1 4.9611 -3.7140 9.0092 35 1 1.1776 -3.8527 11.3964 36 1 1.5065 -3.9177 13.8350 37 1 3.7224 -3.4387 14.7931 38 1 5.6123 -2.8856 13.3163 39 1 5.2942 -2.8288 10.8761 40 1 5.7987 -2.2223 6.8553 41 1 5.2908 -3.6764 5.8927 42 1 2.8452 1.0296 2.0904 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16534228_12175864.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:08:08 Heat of formation + Delta-G solvation = 49.652024 kcal Electronic energy + Delta-G solvation = -24434.392403 eV Core-core repulsion = 20768.822803 eV Total energy + Delta-G solvation = -3665.569601 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.142 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.14533 -41.24117 -40.29404 -38.30178 -38.02839 -35.53031 -34.68915 -32.33191 -31.91695 -30.95500 -29.11497 -26.89903 -26.58842 -25.92449 -24.39657 -23.42132 -23.16474 -22.53858 -20.57807 -19.56920 -19.16384 -18.55265 -18.09409 -17.30991 -16.93729 -16.78501 -16.58270 -16.39802 -16.12590 -15.92554 -15.79249 -15.44688 -15.02560 -14.90101 -14.56724 -14.34017 -14.17896 -13.99410 -13.69706 -13.50201 -13.24557 -13.14709 -12.52984 -12.26431 -12.21933 -12.11341 -11.87314 -11.85269 -11.74182 -11.68658 -11.29200 -11.18268 -10.72999 -10.01753 -9.93312 -9.14267 -9.12525 -5.03959 0.05431 0.16087 0.41138 0.53049 1.20706 1.50737 1.73755 1.90398 2.15683 2.79765 2.87527 3.10846 3.30409 3.34295 3.40154 3.58334 3.65131 3.70774 3.71687 3.78452 3.89891 3.95015 4.13554 4.18059 4.22331 4.26726 4.32068 4.47901 4.52980 4.55205 4.55591 4.58527 4.66295 4.71754 4.77772 4.92547 4.96329 5.06410 5.08693 5.30796 5.37221 5.49032 5.62985 5.78468 5.84619 6.00224 6.33430 6.38579 6.48048 7.28514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.680 3.320 4 C -0.292 4.292 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.570 3.430 8 N -0.678 5.678 9 C 0.137 3.863 10 H 0.113 0.887 11 C -0.146 4.146 12 C -0.111 4.111 13 H 0.101 0.899 14 C 0.069 3.931 15 O -0.313 6.313 16 C 0.129 3.871 17 C -0.154 4.154 18 C -0.080 4.080 19 C -0.160 4.160 20 C -0.080 4.080 21 C -0.211 4.211 22 C -0.137 4.137 23 N -0.561 5.561 24 C 0.198 3.802 25 H 0.376 0.624 26 H 0.120 0.880 27 H -0.253 1.253 28 H -0.258 1.258 29 H 0.171 0.829 30 H 0.415 0.585 31 H 0.074 0.926 32 H 0.094 0.906 33 H 0.065 0.935 34 H 0.064 0.936 35 H 0.130 0.870 36 H 0.129 0.871 37 H 0.124 0.876 38 H 0.125 0.875 39 H 0.127 0.873 40 H 0.101 0.899 41 H 0.081 0.919 42 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.806 1.021 0.514 3.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.581 3.419 4 C -0.300 4.300 5 C 0.056 3.944 6 N -0.290 5.290 7 C 0.214 3.786 8 N -0.313 5.313 9 C 0.031 3.969 10 H 0.131 0.869 11 C -0.185 4.185 12 C -0.130 4.130 13 H 0.120 0.880 14 C -0.006 4.006 15 O -0.227 6.227 16 C 0.084 3.916 17 C -0.173 4.173 18 C -0.098 4.098 19 C -0.178 4.178 20 C -0.098 4.098 21 C -0.229 4.229 22 C -0.175 4.175 23 N -0.283 5.283 24 C 0.030 3.970 25 H 0.223 0.777 26 H 0.138 0.862 27 H -0.178 1.178 28 H -0.182 1.182 29 H 0.188 0.812 30 H 0.253 0.747 31 H 0.093 0.907 32 H 0.112 0.888 33 H 0.084 0.916 34 H 0.082 0.918 35 H 0.148 0.852 36 H 0.147 0.853 37 H 0.142 0.858 38 H 0.143 0.857 39 H 0.145 0.855 40 H 0.120 0.880 41 H 0.099 0.901 42 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 3.961 1.130 0.822 4.200 hybrid contribution -1.245 -0.135 -0.036 1.253 sum 2.715 0.994 0.785 2.997 Atomic orbital electron populations 1.86614 1.17766 1.79870 1.49336 1.24676 0.83759 1.10564 0.97450 0.95191 0.91476 0.74557 0.80725 1.21654 1.09095 0.97716 1.01533 1.22850 0.89097 0.90979 0.91504 1.67978 1.16513 1.40080 1.04458 1.19340 0.86971 0.85549 0.86744 1.43810 1.58247 1.11826 1.17431 1.21785 0.92394 0.95896 0.86848 0.86946 1.23556 1.01392 0.96985 0.96522 1.22656 0.98766 0.99772 0.91762 0.88048 1.22858 0.87518 1.00423 0.89791 1.86084 1.37083 1.85015 1.14523 1.19040 0.93896 0.95919 0.82746 1.20491 0.98284 1.05751 0.92729 1.21024 0.97509 0.97284 0.94018 1.21120 0.93224 1.03315 1.00127 1.20993 0.99085 0.97024 0.92742 1.21273 0.96578 1.08458 0.96633 1.23373 0.96790 1.01004 0.96367 1.67925 1.27084 1.08201 1.25046 1.22849 0.88162 0.99469 0.86529 0.77650 0.86194 1.17762 1.18245 0.81231 0.74685 0.90741 0.88757 0.91640 0.91763 0.85228 0.85263 0.85790 0.85721 0.85542 0.88028 0.90077 0.81640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.12 12.85 -35.23 -0.45 -0.58 16 2 C -0.05 0.07 2.83 36.01 0.10 0.17 16 3 Si 0.68 -1.35 29.95 -169.99 -5.09 -6.44 16 4 C -0.29 0.08 5.36 -104.35 -0.56 -0.48 16 5 C 0.22 0.20 10.99 -17.23 -0.19 0.01 16 6 N -0.57 -1.51 10.46 -13.93 -0.15 -1.65 16 7 C 0.57 1.33 8.42 -322.82 -2.72 -1.39 16 8 N -0.68 -0.19 5.41 -55.00 -0.30 -0.48 16 9 C 0.14 -0.15 4.33 -67.11 -0.29 -0.45 16 10 H 0.11 -0.05 7.37 -51.93 -0.38 -0.43 16 11 C -0.15 0.14 7.43 -25.92 -0.19 -0.05 16 12 C -0.11 0.18 3.89 -89.81 -0.35 -0.17 16 13 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 14 C 0.07 -0.06 4.58 37.16 0.17 0.11 16 15 O -0.31 -0.71 10.14 -19.44 -0.20 -0.90 16 16 C 0.13 0.32 6.69 -39.21 -0.26 0.06 16 17 C -0.15 -0.33 9.99 -39.43 -0.39 -0.72 16 18 C -0.08 -0.09 10.04 -39.61 -0.40 -0.49 16 19 C -0.16 -0.14 10.04 -39.56 -0.40 -0.54 16 20 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 21 C -0.21 -0.27 9.04 -39.43 -0.36 -0.63 16 22 C -0.14 0.39 7.39 -25.92 -0.19 0.20 16 23 N -0.56 -1.14 9.13 -13.93 -0.13 -1.26 16 24 C 0.20 0.03 9.92 -17.22 -0.17 -0.14 16 25 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 26 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 27 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 28 H -0.26 0.04 7.02 56.52 0.40 0.43 16 29 H 0.17 -0.15 8.06 -52.48 -0.42 -0.58 16 30 H 0.42 -0.26 8.82 -40.82 -0.36 -0.62 16 31 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 33 H 0.07 -0.11 7.37 -51.93 -0.38 -0.49 16 34 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 35 H 0.13 0.16 8.06 -52.49 -0.42 -0.26 16 36 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 -0.08 6.30 -52.48 -0.33 -0.41 16 40 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 41 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 42 H 0.17 -0.36 5.01 -52.49 -0.26 -0.62 16 LS Contribution 352.94 15.07 5.32 5.32 Total: 0.00 -6.99 352.94 -13.14 -20.13 By element: Atomic # 1 Polarization: -3.61 SS G_CDS: -5.55 Total: -9.16 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -6.60 Total: -4.97 kcal Atomic # 7 Polarization: -2.83 SS G_CDS: -0.57 Total: -3.40 kcal Atomic # 8 Polarization: -0.83 SS G_CDS: -0.65 Total: -1.48 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.09 Total: -6.44 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -6.99 -13.14 -20.13 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16534228_12175864.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.783 kcal (2) G-P(sol) polarization free energy of solvation -6.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.131 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.652 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds