Wall clock time and date at job start Mon Mar 8 2021 07:08:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86296 * 109.47040 * 2 1 4 4 C 1.50705 * 109.46972 * 119.99861 * 2 1 3 5 5 C 1.38026 * 120.33073 * 244.99927 * 4 2 1 6 6 N 1.31978 * 120.84929 * 180.02562 * 5 4 2 7 7 C 1.32385 * 121.62750 * 359.97438 * 6 5 4 8 8 N 1.39002 * 119.71041 * 179.97438 * 7 6 5 9 9 C 1.46496 * 120.00327 * 179.97438 * 8 7 6 10 10 H 1.08999 * 112.85091 * 23.80591 * 9 8 7 11 11 C 1.53784 * 113.61271 * 155.00052 * 9 8 7 12 12 C 1.53782 * 87.07872 * 89.20371 * 11 9 8 13 13 H 1.08996 * 113.61303 * 270.79750 * 12 11 9 14 14 C 1.53003 * 113.61497 * 139.98218 * 12 11 9 15 15 O 1.42899 * 109.47433 * 174.99742 * 14 12 11 16 16 C 1.35893 * 117.00392 * 179.97438 * 15 14 12 17 17 C 1.38736 * 120.05957 * 180.02562 * 16 15 14 18 18 C 1.38138 * 119.94337 * 180.30421 * 17 16 15 19 19 C 1.38270 * 120.05794 * 359.46080 * 18 17 16 20 20 C 1.38259 * 120.10998 * 0.51383 * 19 18 17 21 21 C 1.38146 * 120.05869 * 359.76954 * 20 19 18 22 22 C 1.53773 * 87.08342 * 25.43406 * 12 11 9 23 23 C 1.39144 * 120.58782 * 0.27208 * 7 6 5 24 24 C 1.38295 * 119.09552 * 359.47982 * 23 7 6 25 25 H 0.96702 * 113.99868 * 300.00266 * 1 2 3 26 26 H 1.08996 * 109.47077 * 239.99620 * 2 1 3 27 27 H 1.48510 * 110.00059 * 178.68222 * 3 2 1 28 28 H 1.48502 * 110.00301 * 299.99726 * 3 2 1 29 29 H 1.07994 * 119.57457 * 0.02562 * 5 4 2 30 30 H 0.97000 * 119.99579 * 0.02562 * 8 7 6 31 31 H 1.08992 * 113.61768 * 334.65534 * 11 9 8 32 32 H 1.09000 * 113.69152 * 203.76086 * 11 9 8 33 33 H 1.09002 * 109.47184 * 54.99996 * 14 12 11 34 34 H 1.09001 * 109.46987 * 294.99702 * 14 12 11 35 35 H 1.08002 * 120.02291 * 0.02562 * 17 16 15 36 36 H 1.08004 * 119.96766 * 179.69880 * 18 17 16 37 37 H 1.08001 * 119.94275 * 180.25985 * 19 18 17 38 38 H 1.08006 * 119.97187 * 179.74376 * 20 19 18 39 39 H 1.07993 * 120.03340 * 179.97438 * 21 20 19 40 40 H 1.09002 * 113.62035 * 89.11947 * 22 12 11 41 41 H 1.09005 * 113.61438 * 220.02430 * 22 12 11 42 42 H 1.08001 * 120.45349 * 179.70215 * 23 7 6 43 43 H 1.08000 * 120.74651 * 180.21808 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6384 -0.0200 2.1941 6 7 3.0834 -0.6320 3.2754 7 6 2.8716 -1.9228 3.4794 8 7 3.3590 -2.5271 4.6324 9 6 3.1278 -3.9549 4.8649 10 1 2.9513 -4.5106 3.9439 11 6 4.1724 -4.6060 5.7867 12 6 3.2627 -4.2149 6.9632 13 1 3.4717 -3.2239 7.3660 14 6 3.1680 -5.2894 8.0483 15 8 2.4003 -4.7916 9.1460 16 6 2.2189 -5.6279 10.2016 17 6 1.4833 -5.2097 11.3011 18 6 1.3057 -6.0595 12.3756 19 6 1.8508 -7.3300 12.3512 20 6 2.5838 -7.7493 11.2565 21 6 2.7693 -6.9013 10.1819 22 6 2.0929 -4.2422 5.9655 23 6 2.1707 -2.6813 2.5469 24 6 1.6874 -2.0663 1.4064 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5139 -0.8899 27 1 3.5347 1.7703 0.0321 28 1 1.5616 2.4679 -1.2085 29 1 2.8298 1.0345 2.0616 30 1 3.8515 -2.0032 5.2834 31 1 5.1337 -4.0924 5.7885 32 1 4.2683 -5.6829 5.6481 33 1 4.1695 -5.5472 8.3928 34 1 2.6846 -6.1768 7.6397 35 1 1.0538 -4.2189 11.3188 36 1 0.7373 -5.7326 13.2338 37 1 1.7073 -7.9943 13.1905 38 1 3.0121 -8.7407 11.2416 39 1 3.3422 -7.2291 9.3272 40 1 1.6189 -5.2196 5.8749 41 1 1.3754 -3.4347 6.1116 42 1 2.0033 -3.7352 2.7132 43 1 1.1369 -2.6287 0.6669 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16534228_13915762.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:08:12 Heat of formation + Delta-G solvation = 32.467391 kcal Electronic energy + Delta-G solvation = -24270.666734 eV Core-core repulsion = 20669.777863 eV Total energy + Delta-G solvation = -3600.888871 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.67136 -41.12519 -40.23818 -38.25277 -37.80266 -35.35191 -33.39527 -32.05040 -31.48370 -30.82780 -29.08550 -26.93792 -26.34429 -25.07807 -24.26561 -23.38325 -22.80949 -22.37757 -20.45272 -19.18303 -18.90866 -18.42768 -17.46798 -17.26239 -16.95462 -16.79296 -16.50204 -16.22250 -16.09688 -15.89519 -15.38458 -15.20217 -14.90656 -14.83825 -14.35519 -14.22890 -14.12046 -14.03915 -13.72024 -13.57827 -13.31956 -13.23839 -12.54308 -12.40192 -12.21930 -12.13852 -12.00131 -11.86571 -11.70140 -11.34211 -11.09717 -10.72882 -10.39765 -10.37736 -9.94690 -9.14632 -8.73537 -5.02345 0.23771 0.39744 0.42100 0.51603 1.31853 1.64709 1.96208 1.99636 2.13037 2.83511 2.86116 3.23406 3.34940 3.48908 3.56633 3.59602 3.64374 3.78227 3.87127 3.91785 3.96835 4.04766 4.10524 4.19445 4.21931 4.27787 4.33392 4.41116 4.46542 4.50254 4.53506 4.54465 4.60248 4.71922 4.73714 4.86564 4.90664 5.01080 5.05774 5.08332 5.32139 5.35614 5.47671 5.51871 5.61749 5.83063 5.98153 6.46111 6.49370 6.60135 7.14441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.680 3.320 4 C -0.235 4.235 5 C 0.158 3.842 6 N -0.539 5.539 7 C 0.410 3.590 8 N -0.705 5.705 9 C 0.130 3.870 10 H 0.101 0.899 11 C -0.137 4.137 12 C -0.109 4.109 13 H 0.103 0.897 14 C 0.069 3.931 15 O -0.313 6.313 16 C 0.129 3.871 17 C -0.153 4.153 18 C -0.080 4.080 19 C -0.159 4.159 20 C -0.080 4.080 21 C -0.211 4.211 22 C -0.150 4.150 23 C -0.238 4.238 24 C -0.005 4.005 25 H 0.379 0.621 26 H 0.112 0.888 27 H -0.256 1.256 28 H -0.253 1.253 29 H 0.155 0.845 30 H 0.407 0.593 31 H 0.081 0.919 32 H 0.100 0.900 33 H 0.064 0.936 34 H 0.065 0.935 35 H 0.130 0.870 36 H 0.130 0.870 37 H 0.124 0.876 38 H 0.125 0.875 39 H 0.126 0.874 40 H 0.093 0.907 41 H 0.078 0.922 42 H 0.135 0.865 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.141 -2.310 1.747 2.899 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.582 3.418 4 C -0.240 4.240 5 C 0.000 4.000 6 N -0.256 5.256 7 C 0.175 3.825 8 N -0.336 5.336 9 C 0.023 3.977 10 H 0.119 0.881 11 C -0.175 4.175 12 C -0.127 4.127 13 H 0.121 0.879 14 C -0.006 4.006 15 O -0.227 6.227 16 C 0.084 3.916 17 C -0.172 4.172 18 C -0.098 4.098 19 C -0.178 4.178 20 C -0.099 4.099 21 C -0.230 4.230 22 C -0.189 4.189 23 C -0.263 4.263 24 C -0.031 4.031 25 H 0.226 0.774 26 H 0.129 0.871 27 H -0.181 1.181 28 H -0.178 1.178 29 H 0.172 0.828 30 H 0.243 0.757 31 H 0.100 0.900 32 H 0.119 0.881 33 H 0.082 0.918 34 H 0.083 0.917 35 H 0.148 0.852 36 H 0.148 0.852 37 H 0.142 0.858 38 H 0.143 0.857 39 H 0.144 0.856 40 H 0.112 0.888 41 H 0.097 0.903 42 H 0.152 0.848 43 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.084 -1.550 1.357 2.328 hybrid contribution -0.001 -1.167 -0.467 1.257 sum 1.083 -2.717 0.890 3.058 Atomic orbital electron populations 1.86494 1.17330 1.81686 1.49268 1.24786 0.85021 1.09677 0.96924 0.94898 0.81189 0.78147 0.87579 1.21000 1.06881 0.96121 1.00038 1.22186 0.91435 0.98704 0.87666 1.67116 1.25727 1.09028 1.23723 1.18345 0.89181 0.88433 0.86536 1.44140 1.60277 1.08341 1.20882 1.21807 0.96584 0.81068 0.98237 0.88124 1.23350 0.98119 1.02069 0.93948 1.22607 0.97735 0.99706 0.92677 0.87923 1.22853 0.95107 0.97058 0.85591 1.86080 1.69726 1.40926 1.25930 1.19036 0.95378 0.89300 0.87904 1.20493 1.02507 1.01513 0.92697 1.21029 0.97954 0.93423 0.97411 1.21122 1.00623 0.96838 0.99178 1.20993 0.96870 0.99151 0.92845 1.21268 1.05994 0.94384 1.01319 1.23615 0.96940 1.03204 0.95106 1.21503 1.06645 1.01345 0.96788 1.21198 0.93073 0.93433 0.95413 0.77420 0.87093 1.18078 1.17789 0.82803 0.75665 0.89997 0.88131 0.91776 0.91687 0.85187 0.85237 0.85782 0.85734 0.85587 0.88809 0.90329 0.84761 0.84659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.18 12.84 -35.23 -0.45 -0.63 16 2 C -0.05 0.01 2.82 36.01 0.10 0.11 16 3 Si 0.68 -0.58 29.83 -169.99 -5.07 -5.65 16 4 C -0.24 -0.14 5.36 -104.46 -0.56 -0.70 16 5 C 0.16 0.18 9.84 -17.57 -0.17 0.00 16 6 N -0.54 -1.44 10.39 -12.44 -0.13 -1.57 16 7 C 0.41 0.63 7.65 -155.03 -1.19 -0.56 16 8 N -0.70 0.34 5.44 -53.14 -0.29 0.05 16 9 C 0.13 -0.31 4.11 -67.12 -0.28 -0.59 16 10 H 0.10 -0.30 6.09 -51.93 -0.32 -0.62 16 11 C -0.14 0.47 7.39 -25.92 -0.19 0.27 16 12 C -0.11 0.23 3.89 -89.81 -0.35 -0.12 16 13 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 14 C 0.07 -0.08 4.58 37.16 0.17 0.09 16 15 O -0.31 -0.59 10.14 -19.40 -0.20 -0.78 16 16 C 0.13 0.28 6.69 -39.21 -0.26 0.02 16 17 C -0.15 -0.28 9.99 -39.43 -0.39 -0.68 16 18 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 19 C -0.16 -0.11 10.04 -39.56 -0.40 -0.51 16 20 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 21 C -0.21 -0.22 9.04 -39.43 -0.36 -0.57 16 22 C -0.15 0.31 7.43 -25.92 -0.19 0.12 16 23 C -0.24 -0.13 9.29 -39.22 -0.36 -0.49 16 24 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 25 H 0.38 -1.26 8.70 45.56 0.40 -0.87 16 26 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 27 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 28 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 29 H 0.16 -0.16 4.91 -52.49 -0.26 -0.42 16 30 H 0.41 -0.29 8.83 -40.82 -0.36 -0.65 16 31 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 33 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 34 H 0.06 -0.14 7.36 -51.93 -0.38 -0.52 16 35 H 0.13 0.12 8.06 -52.49 -0.42 -0.31 16 36 H 0.13 -0.16 8.06 -52.48 -0.42 -0.58 16 37 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 38 H 0.12 -0.16 8.06 -52.48 -0.42 -0.59 16 39 H 0.13 -0.11 6.30 -52.49 -0.33 -0.44 16 40 H 0.09 -0.26 7.90 -51.93 -0.41 -0.67 16 41 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 42 H 0.13 -0.18 6.03 -52.49 -0.32 -0.50 16 43 H 0.14 -0.07 8.06 -52.49 -0.42 -0.49 16 LS Contribution 355.43 15.07 5.36 5.36 Total: 0.00 -6.84 355.43 -12.18 -19.02 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -5.79 Total: -10.89 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -5.61 Total: -4.91 kcal Atomic # 7 Polarization: -1.09 SS G_CDS: -0.42 Total: -1.51 kcal Atomic # 8 Polarization: -0.77 SS G_CDS: -0.65 Total: -1.41 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -5.07 Total: -5.65 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -6.84 -12.18 -19.02 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16534228_13915762.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.488 kcal (2) G-P(sol) polarization free energy of solvation -6.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.184 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.021 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds