Wall clock time and date at job start Mon Mar 8 2021 07:11:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 C 1.52995 * 109.47678 * 342.49992 * 3 2 1 5 5 H 1.09008 * 112.90581 * 316.24901 * 4 3 2 6 6 C 1.53781 * 113.61924 * 185.00300 * 4 3 2 7 7 C 1.53778 * 87.08084 * 220.01525 * 6 4 3 8 8 H 1.09001 * 113.61020 * 140.06344 * 7 6 4 9 9 N 1.46495 * 113.61455 * 270.87878 * 7 6 4 10 10 C 1.39011 * 120.00037 * 204.99858 * 9 7 6 11 11 C 1.39095 * 119.70308 * 0.02562 * 10 9 7 12 12 C 1.38343 * 119.09524 * 180.02562 * 11 10 9 13 13 C 1.38839 * 118.50801 * 0.02562 * 12 11 10 14 14 C 1.50696 * 120.33515 * 180.02562 * 13 12 11 15 15 O 1.42903 * 109.47131 * 299.99369 * 14 13 12 16 16 Si 1.86305 * 109.47185 * 179.97438 * 14 13 12 17 17 C 1.38062 * 119.32451 * 0.27155 * 13 12 11 18 18 N 1.31942 * 120.85807 * 359.43653 * 17 13 12 19 19 C 1.53780 * 113.61432 * 87.49981 * 4 3 2 20 20 H 1.09001 * 109.47043 * 222.49663 * 3 2 1 21 21 H 1.09007 * 109.47107 * 102.50270 * 3 2 1 22 22 H 1.09006 * 113.61534 * 105.46561 * 6 4 3 23 23 H 1.09005 * 113.61198 * 334.56933 * 6 4 3 24 24 H 0.96998 * 119.99989 * 25.00843 * 9 7 6 25 25 H 1.08003 * 120.45251 * 0.03928 * 11 10 9 26 26 H 1.08008 * 120.74327 * 180.02562 * 12 11 10 27 27 H 1.08999 * 109.47358 * 59.99729 * 14 13 12 28 28 H 0.96700 * 114.00311 * 300.00591 * 15 14 13 29 29 H 1.48499 * 109.99670 * 58.67633 * 16 14 13 30 30 H 1.48497 * 110.00233 * 179.97438 * 16 14 13 31 31 H 1.08000 * 119.56922 * 179.72612 * 17 13 12 32 32 H 1.08996 * 113.61636 * 25.44342 * 19 4 3 33 33 H 1.08993 * 113.61596 * 254.52757 * 19 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1187 -1.3748 0.4337 5 1 2.5765 -1.7783 1.2890 6 6 4.6475 -1.4448 0.5849 7 6 4.5682 -2.8403 -0.0563 8 1 5.3754 -3.0440 -0.7599 9 7 4.3721 -3.9211 0.9130 10 6 4.7857 -5.2125 0.6071 11 6 5.3855 -5.4715 -0.6209 12 6 5.7917 -6.7614 -0.9124 13 6 5.5832 -7.7524 0.0373 14 6 6.0102 -9.1713 -0.2370 15 8 5.3276 -9.6590 -1.3939 16 14 5.5899 -10.2409 1.2294 17 6 4.9760 -7.4257 1.2334 18 7 4.6037 -6.1855 1.4868 19 6 3.2666 -2.3714 -0.7280 20 1 2.9710 0.7585 0.6942 21 1 2.9712 0.2233 -1.0034 22 1 4.9836 -1.4591 1.6217 23 1 5.1803 -0.7141 -0.0238 24 1 3.9536 -3.7356 1.7681 25 1 5.5322 -4.6763 -1.3369 26 1 6.2606 -6.9922 -1.8577 27 1 7.0858 -9.2000 -0.4108 28 1 4.3642 -9.6620 -1.3102 29 1 4.1302 -10.1852 1.4969 30 1 6.0054 -11.6429 0.9713 31 1 4.8078 -8.1944 1.9731 32 1 3.4220 -1.8943 -1.6956 33 1 2.4881 -3.1339 -0.7510 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16534924_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:11:19 Heat of formation + Delta-G solvation = 66.288669 kcal Electronic energy + Delta-G solvation = -16827.100653 eV Core-core repulsion = 14048.462183 eV Total energy + Delta-G solvation = -2778.638471 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 246.111 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -41.63597 -40.58416 -38.06212 -37.47440 -35.48276 -33.42581 -31.94667 -30.57791 -26.97225 -26.48197 -25.15520 -24.15844 -22.65594 -20.47370 -19.20479 -18.56327 -18.41102 -17.48167 -16.59851 -16.51670 -16.36402 -16.17684 -15.80647 -15.34150 -15.07092 -14.69465 -14.26615 -14.04702 -13.99774 -13.83291 -13.65767 -13.33994 -13.22366 -12.67932 -12.45917 -12.12661 -11.96723 -11.82922 -11.43383 -11.11958 -10.76905 -10.53201 -10.37461 -8.75259 -4.95478 0.22640 0.40928 1.30508 1.60351 1.77801 1.82439 1.95164 1.98491 2.80478 2.86966 3.21153 3.38224 3.39587 3.54668 3.57753 3.64224 3.76360 3.94078 4.03978 4.07695 4.23261 4.32791 4.35396 4.47081 4.49973 4.56196 4.60921 4.72627 4.82686 4.84522 4.99649 5.03194 5.30575 5.50784 5.97149 6.41455 6.47794 6.59858 7.13557 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.109 4.109 5 H 0.098 0.902 6 C -0.137 4.137 7 C 0.128 3.872 8 H 0.101 0.899 9 N -0.706 5.706 10 C 0.409 3.591 11 C -0.238 4.238 12 C -0.006 4.006 13 C -0.233 4.233 14 C -0.059 4.059 15 O -0.532 6.532 16 Si 0.678 3.322 17 C 0.157 3.843 18 N -0.539 5.539 19 C -0.156 4.156 20 H 0.113 0.887 21 H 0.111 0.889 22 H 0.081 0.919 23 H 0.104 0.896 24 H 0.407 0.593 25 H 0.135 0.865 26 H 0.136 0.864 27 H 0.117 0.883 28 H 0.375 0.625 29 H -0.259 1.259 30 H -0.256 1.256 31 H 0.155 0.845 32 H 0.098 0.902 33 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.691 2.870 0.227 6.378 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.129 4.129 5 H 0.116 0.884 6 C -0.175 4.175 7 C 0.022 3.978 8 H 0.119 0.881 9 N -0.337 5.337 10 C 0.174 3.826 11 C -0.262 4.262 12 C -0.032 4.032 13 C -0.238 4.238 14 C -0.170 4.170 15 O -0.338 6.338 16 Si 0.579 3.421 17 C -0.001 4.001 18 N -0.256 5.256 19 C -0.195 4.195 20 H 0.131 0.869 21 H 0.129 0.871 22 H 0.100 0.900 23 H 0.123 0.877 24 H 0.243 0.757 25 H 0.153 0.847 26 H 0.154 0.846 27 H 0.135 0.865 28 H 0.223 0.777 29 H -0.183 1.183 30 H -0.181 1.181 31 H 0.172 0.828 32 H 0.116 0.884 33 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 3.784 2.456 0.951 4.610 hybrid contribution -0.305 0.014 -1.292 1.328 sum 3.479 2.470 -0.341 4.280 Atomic orbital electron populations 1.81298 1.13172 1.08157 1.08478 1.29221 0.95355 0.93541 0.93515 1.19338 0.81690 0.99401 1.05250 1.22593 0.96736 0.93770 0.99787 0.88401 1.23397 0.95096 0.96196 1.02823 1.21831 0.98098 0.86330 0.91581 0.88065 1.44155 1.65771 1.03748 1.20050 1.18364 0.89237 0.85727 0.89268 1.21500 1.08025 0.98504 0.98209 1.21204 0.92786 0.91050 0.98128 1.20941 1.07953 0.97573 0.97341 1.24753 1.00545 0.94141 0.97534 1.86591 1.23502 1.86243 1.37483 0.95184 0.83721 0.80231 0.82973 1.22222 0.91503 0.92103 0.94274 1.67144 1.24408 1.00487 1.33551 1.23698 0.98646 0.99057 0.98124 0.86906 0.87050 0.90014 0.87714 0.75706 0.84706 0.84613 0.86534 0.77711 1.18345 1.18058 0.82801 0.88378 0.90692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.83 18.54 42.15 0.78 -1.05 16 2 C 0.20 -0.02 15.42 -20.76 -0.32 -0.34 16 3 C -0.02 0.09 5.54 -29.52 -0.16 -0.08 16 4 C -0.11 0.53 3.49 -89.81 -0.31 0.22 16 5 H 0.10 -0.37 8.12 -51.92 -0.42 -0.79 16 6 C -0.14 0.79 7.39 -25.92 -0.19 0.60 16 7 C 0.13 -0.51 4.11 -67.12 -0.28 -0.79 16 8 H 0.10 -0.46 6.10 -51.93 -0.32 -0.77 16 9 N -0.71 1.10 5.44 -53.15 -0.29 0.81 16 10 C 0.41 0.33 7.65 -155.01 -1.19 -0.86 16 11 C -0.24 0.05 9.29 -39.22 -0.36 -0.31 16 12 C -0.01 0.00 9.76 -39.32 -0.38 -0.38 16 13 C -0.23 -0.04 5.40 -104.47 -0.56 -0.61 16 14 C -0.06 0.03 2.84 36.00 0.10 0.13 16 15 O -0.53 -0.53 12.78 -35.23 -0.45 -0.98 16 16 Si 0.68 -0.68 29.82 -169.99 -5.07 -5.75 16 17 C 0.16 0.13 9.84 -17.57 -0.17 -0.04 16 18 N -0.54 -1.19 10.39 -12.44 -0.13 -1.32 16 19 C -0.16 0.63 7.43 -25.92 -0.19 0.44 16 20 H 0.11 -0.79 8.14 -51.93 -0.42 -1.21 16 21 H 0.11 -0.79 7.84 -51.93 -0.41 -1.20 16 22 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 23 H 0.10 -0.76 8.10 -51.93 -0.42 -1.18 16 24 H 0.41 -0.72 8.82 -40.82 -0.36 -1.08 16 25 H 0.14 -0.30 6.03 -52.48 -0.32 -0.62 16 26 H 0.14 -0.14 8.06 -52.48 -0.42 -0.56 16 27 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H 0.38 -0.58 8.70 45.56 0.40 -0.19 16 29 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 30 H -0.26 -0.59 7.11 56.52 0.40 -0.18 16 31 H 0.16 -0.15 4.88 -52.49 -0.26 -0.41 16 32 H 0.10 -0.52 7.90 -51.93 -0.41 -0.93 16 33 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 286.27 15.07 4.31 4.31 Total: 0.00 -8.29 286.27 -8.68 -16.98 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -3.81 Total: -10.98 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -4.03 Total: -2.02 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: 0.36 Total: -1.55 kcal Atomic # 8 Polarization: -0.53 SS G_CDS: -0.45 Total: -0.98 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.07 Total: -5.75 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -8.29 -8.68 -16.98 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16534924_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.265 kcal (2) G-P(sol) polarization free energy of solvation -8.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.976 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.289 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds