Wall clock time and date at job start Mon Mar 8 2021 07:11:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 C 1.52995 * 109.47678 * 342.49992 * 3 2 1 5 5 H 1.09008 * 112.90581 * 316.24901 * 4 3 2 6 6 C 1.53781 * 113.61924 * 185.00300 * 4 3 2 7 7 C 1.53778 * 87.08084 * 220.01525 * 6 4 3 8 8 H 1.09001 * 113.61020 * 140.06344 * 7 6 4 9 9 N 1.46495 * 113.61455 * 270.87878 * 7 6 4 10 10 C 1.39011 * 120.00037 * 204.99858 * 9 7 6 11 11 C 1.39095 * 119.70308 * 0.02562 * 10 9 7 12 12 C 1.38343 * 119.09524 * 180.02562 * 11 10 9 13 13 C 1.38839 * 118.50801 * 0.02562 * 12 11 10 14 14 C 1.50696 * 120.33515 * 180.02562 * 13 12 11 15 15 O 1.42903 * 109.47131 * 299.99369 * 14 13 12 16 16 Si 1.86305 * 109.47185 * 179.97438 * 14 13 12 17 17 C 1.38062 * 119.32451 * 0.27155 * 13 12 11 18 18 N 1.31942 * 120.85807 * 359.43653 * 17 13 12 19 19 C 1.53780 * 113.61432 * 87.49981 * 4 3 2 20 20 H 1.09001 * 109.47043 * 222.49663 * 3 2 1 21 21 H 1.09007 * 109.47107 * 102.50270 * 3 2 1 22 22 H 1.09006 * 113.61534 * 105.46561 * 6 4 3 23 23 H 1.09005 * 113.61198 * 334.56933 * 6 4 3 24 24 H 0.96998 * 119.99989 * 25.00843 * 9 7 6 25 25 H 1.08003 * 120.45251 * 0.03928 * 11 10 9 26 26 H 1.08008 * 120.74327 * 180.02562 * 12 11 10 27 27 H 1.08999 * 109.47358 * 59.99729 * 14 13 12 28 28 H 0.96700 * 114.00311 * 300.00591 * 15 14 13 29 29 H 1.48499 * 109.99670 * 58.67633 * 16 14 13 30 30 H 1.48497 * 110.00233 * 179.97438 * 16 14 13 31 31 H 1.08000 * 119.56922 * 179.72612 * 17 13 12 32 32 H 1.08996 * 113.61636 * 25.44342 * 19 4 3 33 33 H 1.08993 * 113.61596 * 254.52757 * 19 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1187 -1.3748 0.4337 5 1 2.5765 -1.7783 1.2890 6 6 4.6475 -1.4448 0.5849 7 6 4.5682 -2.8403 -0.0563 8 1 5.3754 -3.0440 -0.7599 9 7 4.3721 -3.9211 0.9130 10 6 4.7857 -5.2125 0.6071 11 6 5.3855 -5.4715 -0.6209 12 6 5.7917 -6.7614 -0.9124 13 6 5.5832 -7.7524 0.0373 14 6 6.0102 -9.1713 -0.2370 15 8 5.3276 -9.6590 -1.3939 16 14 5.5899 -10.2409 1.2294 17 6 4.9760 -7.4257 1.2334 18 7 4.6037 -6.1855 1.4868 19 6 3.2666 -2.3714 -0.7280 20 1 2.9710 0.7585 0.6942 21 1 2.9712 0.2233 -1.0034 22 1 4.9836 -1.4591 1.6217 23 1 5.1803 -0.7141 -0.0238 24 1 3.9536 -3.7356 1.7681 25 1 5.5322 -4.6763 -1.3369 26 1 6.2606 -6.9922 -1.8577 27 1 7.0858 -9.2000 -0.4108 28 1 4.3642 -9.6620 -1.3102 29 1 4.1302 -10.1852 1.4969 30 1 6.0054 -11.6429 0.9713 31 1 4.8078 -8.1944 1.9731 32 1 3.4220 -1.8943 -1.6956 33 1 2.4881 -3.1339 -0.7510 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16534924_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:11:19 Heat of formation + Delta-G solvation = 66.819881 kcal Electronic energy + Delta-G solvation = -16827.077618 eV Core-core repulsion = 14048.462183 eV Total energy + Delta-G solvation = -2778.615436 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 246.111 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.52484 -40.33955 -38.06180 -37.52167 -35.37056 -33.40518 -31.78460 -30.41101 -26.58809 -26.41364 -25.02970 -24.00046 -22.57269 -20.16549 -19.06501 -18.53629 -18.28078 -17.38989 -16.47582 -16.36446 -16.20034 -16.06489 -15.61953 -15.25410 -15.00453 -14.58195 -14.28870 -13.99918 -13.94822 -13.73559 -13.35441 -13.27365 -13.06054 -12.51485 -12.36117 -12.05879 -11.78290 -11.56696 -11.07797 -10.96026 -10.72745 -10.52827 -10.37407 -8.65544 -4.91614 0.24684 0.42697 1.34247 1.60523 1.82065 1.86709 1.96436 2.13462 2.83886 3.09895 3.45096 3.56763 3.64411 3.76545 3.80013 3.91409 3.97041 4.05926 4.11612 4.38495 4.44779 4.56854 4.67059 4.78960 4.80562 4.90947 4.95345 4.99248 5.05422 5.16612 5.25057 5.31640 5.41882 5.62956 6.12519 6.49739 6.57313 6.66875 7.17778 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.521 5.521 2 C 0.232 3.768 3 C -0.014 4.014 4 C -0.107 4.107 5 H 0.081 0.919 6 C -0.119 4.119 7 C 0.119 3.881 8 H 0.111 0.889 9 N -0.704 5.704 10 C 0.396 3.604 11 C -0.239 4.239 12 C -0.013 4.013 13 C -0.235 4.235 14 C -0.061 4.061 15 O -0.549 6.549 16 Si 0.755 3.245 17 C 0.144 3.856 18 N -0.568 5.568 19 C -0.157 4.157 20 H 0.141 0.859 21 H 0.142 0.858 22 H 0.080 0.920 23 H 0.132 0.868 24 H 0.405 0.595 25 H 0.155 0.845 26 H 0.146 0.854 27 H 0.127 0.873 28 H 0.384 0.616 29 H -0.288 1.288 30 H -0.300 1.300 31 H 0.164 0.836 32 H 0.117 0.883 33 H 0.045 0.955 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.321 4.206 -0.329 8.450 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.200 5.200 2 C -0.084 4.084 3 C -0.053 4.053 4 C -0.127 4.127 5 H 0.099 0.901 6 C -0.157 4.157 7 C 0.013 3.987 8 H 0.129 0.871 9 N -0.335 5.335 10 C 0.160 3.840 11 C -0.264 4.264 12 C -0.039 4.039 13 C -0.240 4.240 14 C -0.171 4.171 15 O -0.357 6.357 16 Si 0.661 3.339 17 C -0.013 4.013 18 N -0.286 5.286 19 C -0.196 4.196 20 H 0.159 0.841 21 H 0.160 0.840 22 H 0.098 0.902 23 H 0.150 0.850 24 H 0.241 0.759 25 H 0.173 0.827 26 H 0.164 0.836 27 H 0.145 0.855 28 H 0.233 0.767 29 H -0.215 1.215 30 H -0.228 1.228 31 H 0.181 0.819 32 H 0.136 0.864 33 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges 5.419 3.828 0.393 6.647 hybrid contribution -0.801 -0.419 -1.130 1.447 sum 4.618 3.410 -0.737 5.787 Atomic orbital electron populations 1.81317 1.15994 1.11079 1.11564 1.30224 0.96278 0.90970 0.90903 1.19749 0.78050 0.99758 1.07766 1.22521 0.97612 0.93668 0.98876 0.90053 1.23371 0.94018 0.95212 1.03103 1.22072 0.98350 0.86619 0.91659 0.87119 1.44340 1.65149 1.03588 1.20439 1.18669 0.89500 0.86284 0.89593 1.21719 1.07460 0.99025 0.98169 1.21417 0.92781 0.91199 0.98484 1.20957 1.07995 0.97833 0.97255 1.24872 1.01074 0.93911 0.97280 1.86560 1.24473 1.86357 1.38284 0.94275 0.80931 0.76877 0.81839 1.22427 0.91752 0.92171 0.94923 1.67144 1.25554 1.01260 1.34652 1.23749 0.97699 0.98726 0.99411 0.84146 0.84009 0.90179 0.85021 0.75924 0.82734 0.83590 0.85513 0.76695 1.21477 1.22823 0.81905 0.86440 0.93583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -5.17 18.54 20.00 0.37 -4.80 16 2 C 0.23 -0.04 15.42 89.44 1.38 1.34 16 3 C -0.01 0.18 5.54 28.79 0.16 0.34 16 4 C -0.11 1.17 3.49 -10.27 -0.04 1.14 16 5 H 0.08 -0.59 8.12 -2.38 -0.02 -0.61 16 6 C -0.12 1.65 7.39 31.12 0.23 1.88 16 7 C 0.12 -1.09 4.11 45.52 0.19 -0.91 16 8 H 0.11 -1.22 6.10 -2.39 -0.01 -1.23 16 9 N -0.70 2.11 5.44 -322.06 -1.75 0.36 16 10 C 0.40 0.78 7.65 133.04 1.02 1.80 16 11 C -0.24 0.18 9.29 22.50 0.21 0.39 16 12 C -0.01 0.00 9.76 22.44 0.22 0.22 16 13 C -0.24 -0.15 5.40 -19.76 -0.11 -0.25 16 14 C -0.06 0.05 2.84 71.23 0.20 0.25 16 15 O -0.55 -1.23 12.78 -148.98 -1.90 -3.14 16 16 Si 0.75 -0.94 29.82 68.60 2.05 1.10 16 17 C 0.14 0.35 9.84 84.63 0.83 1.19 16 18 N -0.57 -3.03 10.39 -193.26 -2.01 -5.04 16 19 C -0.16 1.41 7.43 31.12 0.23 1.64 16 20 H 0.14 -2.43 8.14 -2.39 -0.02 -2.45 16 21 H 0.14 -2.55 7.84 -2.38 -0.02 -2.56 16 22 H 0.08 -1.00 8.14 -2.38 -0.02 -1.02 16 23 H 0.13 -2.46 8.10 -2.38 -0.02 -2.48 16 24 H 0.40 -1.15 8.82 -92.71 -0.82 -1.97 16 25 H 0.16 -0.88 6.03 -2.91 -0.02 -0.90 16 26 H 0.15 -0.40 8.06 -2.91 -0.02 -0.42 16 27 H 0.13 -0.37 7.96 -2.39 -0.02 -0.39 16 28 H 0.38 -0.97 8.70 -74.06 -0.64 -1.62 16 29 H -0.29 -0.99 7.11 99.48 0.71 -0.28 16 30 H -0.30 -1.86 7.11 99.48 0.71 -1.15 16 31 H 0.16 -0.17 4.88 -2.91 -0.01 -0.19 16 32 H 0.12 -1.51 7.90 -2.39 -0.02 -1.53 16 33 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 Total: 0.00 -22.46 286.27 1.01 -21.46 By element: Atomic # 1 Polarization: -18.69 SS G_CDS: -0.27 Total: -18.96 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: 4.52 Total: 9.02 kcal Atomic # 7 Polarization: -6.10 SS G_CDS: -3.39 Total: -9.48 kcal Atomic # 8 Polarization: -1.23 SS G_CDS: -1.90 Total: -3.14 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: 2.05 Total: 1.10 kcal Total: -22.46 1.01 -21.46 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16534924_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.276 kcal (2) G-P(sol) polarization free energy of solvation -22.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.456 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.820 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds