Wall clock time and date at job start Mon Mar 8 2021 07:11:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 C 1.53003 * 109.46984 * 67.75996 * 3 2 1 5 5 H 1.09002 * 112.85017 * 45.32910 * 4 3 2 6 6 C 1.53781 * 113.61337 * 274.13322 * 4 3 2 7 7 C 1.54052 * 86.98687 * 219.98249 * 6 4 3 8 8 H 1.08993 * 113.62310 * 139.97739 * 7 6 4 9 9 N 1.46499 * 113.68672 * 270.87365 * 7 6 4 10 10 C 1.38605 * 120.00038 * 252.52599 * 9 7 6 11 11 N 1.29693 * 124.94901 * 0.02995 * 10 9 7 12 12 C 1.32122 * 116.86341 * 179.97438 * 11 10 9 13 13 C 1.33324 * 114.58311 * 359.97438 * 12 11 10 14 14 C 1.50707 * 125.95298 * 180.02562 * 13 12 11 15 15 O 1.42890 * 109.47127 * 64.99578 * 14 13 12 16 16 Si 1.86297 * 109.47175 * 184.99886 * 14 13 12 17 17 S 1.70970 * 124.94878 * 179.72075 * 10 9 7 18 18 C 1.53783 * 87.07848 * 25.42892 * 7 6 4 19 19 H 1.08997 * 109.47490 * 307.76041 * 3 2 1 20 20 H 1.09004 * 109.46976 * 187.75322 * 3 2 1 21 21 H 1.08999 * 113.61567 * 334.48261 * 6 4 3 22 22 H 1.08998 * 113.61196 * 105.38615 * 6 4 3 23 23 H 0.96999 * 120.00027 * 72.53534 * 9 7 6 24 24 H 1.08000 * 122.70799 * 180.02562 * 12 11 10 25 25 H 1.09002 * 109.46752 * 304.99569 * 14 13 12 26 26 H 0.96705 * 113.99826 * 60.00248 * 15 14 13 27 27 H 1.48497 * 110.00207 * 179.97438 * 16 14 13 28 28 H 1.48500 * 109.99844 * 301.31911 * 16 14 13 29 29 H 1.08992 * 113.61796 * 220.02286 * 18 7 6 30 30 H 1.09005 * 113.68996 * 89.12897 * 18 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1182 -0.5451 -1.3352 5 1 2.5933 -0.1243 -2.1928 6 6 3.2285 -2.0785 -1.3722 7 6 4.5443 -1.8840 -2.1494 8 1 5.3320 -2.5772 -1.8550 9 7 4.3647 -1.8103 -3.6015 10 6 4.7601 -2.8695 -4.4033 11 7 5.2971 -3.9682 -3.9714 12 6 5.6130 -4.8752 -4.8786 13 6 5.3292 -4.5265 -6.1338 14 6 5.5799 -5.3623 -7.3626 15 8 4.7685 -6.5374 -7.3130 16 14 5.1511 -4.3751 -8.8831 17 16 4.6042 -2.9212 -6.1051 18 6 4.6496 -0.5078 -1.4712 19 1 2.9717 -0.6284 0.8124 20 1 2.9709 1.0191 0.1386 21 1 3.3646 -2.5303 -0.3896 22 1 2.4424 -2.5588 -1.9549 23 1 3.9692 -1.0203 -4.0019 24 1 6.0639 -5.8230 -4.6240 25 1 6.6312 -5.6479 -7.3993 26 1 3.8188 -6.3584 -7.2786 27 1 5.3945 -5.1879 -10.1018 28 1 3.7285 -3.9524 -8.8297 29 1 5.0101 0.2791 -2.1337 30 1 5.1734 -0.5294 -0.5156 There are 42 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 42 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16534924_15704118.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:11:22 Heat of formation + Delta-G solvation = 72.447630 kcal Electronic energy + Delta-G solvation = -15505.571782 eV Core-core repulsion = 12816.352630 eV Total energy + Delta-G solvation = -2689.219152 eV No. of doubly occupied orbitals = 42 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 252.067 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.20532 -40.25711 -38.02165 -37.47939 -35.40461 -31.80035 -30.80045 -26.95227 -26.62770 -25.25361 -24.03676 -21.54886 -20.21798 -19.69885 -18.68660 -18.13175 -17.13555 -16.72642 -16.50695 -16.07015 -15.97154 -15.78411 -15.39909 -14.97081 -14.63134 -14.06641 -13.86574 -13.84413 -13.63947 -13.25255 -12.89714 -12.67539 -12.38976 -12.18336 -11.98695 -11.84875 -11.39849 -11.12285 -10.89415 -10.26618 -10.21522 -8.78509 -5.05799 -0.05467 0.00667 0.67359 1.23984 1.54312 1.78014 1.82729 1.89846 2.01002 2.04781 2.86074 3.24380 3.33982 3.40963 3.55317 3.64613 3.74487 3.92382 4.05591 4.32096 4.40119 4.52323 4.53668 4.54914 4.63154 4.73466 4.85935 4.87943 4.95050 5.21117 5.82053 5.99977 6.35070 6.59977 6.98259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.111 4.111 5 H 0.096 0.904 6 C -0.151 4.151 7 C 0.136 3.864 8 H 0.110 0.890 9 N -0.676 5.676 10 C 0.327 3.673 11 N -0.548 5.548 12 C 0.120 3.880 13 C -0.304 4.304 14 C -0.017 4.017 15 O -0.526 6.526 16 Si 0.653 3.347 17 S 0.089 5.911 18 C -0.137 4.137 19 H 0.112 0.888 20 H 0.113 0.887 21 H 0.098 0.902 22 H 0.072 0.928 23 H 0.414 0.586 24 H 0.176 0.824 25 H 0.126 0.874 26 H 0.376 0.624 27 H -0.237 1.237 28 H -0.243 1.243 29 H 0.080 0.920 30 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.784 3.769 0.225 6.095 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.112 5.112 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.131 4.131 5 H 0.114 0.886 6 C -0.191 4.191 7 C 0.028 3.972 8 H 0.127 0.873 9 N -0.315 5.315 10 C -0.043 4.043 11 N -0.273 5.273 12 C -0.031 4.031 13 C -0.427 4.427 14 C -0.131 4.131 15 O -0.333 6.333 16 Si 0.552 3.448 17 S 0.338 5.662 18 C -0.176 4.176 19 H 0.130 0.870 20 H 0.131 0.869 21 H 0.116 0.884 22 H 0.091 0.909 23 H 0.252 0.748 24 H 0.193 0.807 25 H 0.143 0.857 26 H 0.224 0.776 27 H -0.161 1.161 28 H -0.168 1.168 29 H 0.099 0.901 30 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 2.872 4.136 -0.529 5.063 hybrid contribution -0.326 -1.048 0.610 1.256 sum 2.546 3.087 0.081 4.003 Atomic orbital electron populations 1.81293 1.13175 1.08601 1.08102 1.29226 0.95355 0.93405 0.93593 1.19340 0.81662 1.05024 0.99676 1.22639 0.96729 0.96994 0.96728 0.88561 1.23677 0.98556 0.95153 1.01683 1.21897 0.98508 0.98481 0.78314 0.87251 1.43691 1.66751 1.16155 1.04898 1.23694 0.96121 0.91705 0.92808 1.66483 1.22333 1.01745 1.36762 1.21346 0.97050 0.98259 0.86478 1.25528 1.17245 0.99216 1.00698 1.24075 0.99083 0.89553 1.00356 1.86619 1.21390 1.29745 1.95509 0.95185 0.85473 0.86186 0.77940 1.84072 1.62150 1.16845 1.03143 1.23415 0.94959 0.97068 1.02133 0.87008 0.86919 0.88366 0.90898 0.74810 0.80669 0.85651 0.77567 1.16080 1.16762 0.90144 0.87636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -1.79 18.54 42.15 0.78 -1.01 16 2 C 0.20 -0.02 15.42 -20.76 -0.32 -0.34 16 3 C -0.02 0.09 5.53 -29.52 -0.16 -0.08 16 4 C -0.11 0.54 3.48 -89.80 -0.31 0.23 16 5 H 0.10 -0.43 8.13 -51.93 -0.42 -0.85 16 6 C -0.15 0.48 7.45 -25.78 -0.19 0.29 16 7 C 0.14 -0.40 4.44 -66.97 -0.30 -0.70 16 8 H 0.11 -0.15 7.66 -51.93 -0.40 -0.55 16 9 N -0.68 1.41 5.42 -54.85 -0.30 1.11 16 10 C 0.33 0.14 8.09 -87.68 -0.71 -0.57 16 11 N -0.55 -1.18 9.83 -15.21 -0.15 -1.33 16 12 C 0.12 0.16 11.24 -19.14 -0.22 -0.05 16 13 C -0.30 -0.10 5.73 -36.02 -0.21 -0.31 16 14 C -0.02 0.01 2.99 36.01 0.11 0.11 16 15 O -0.53 -0.55 12.88 -35.23 -0.45 -1.00 16 16 Si 0.65 -0.52 31.07 -169.99 -5.28 -5.80 16 17 S 0.09 -0.04 20.59 -107.50 -2.21 -2.25 16 18 C -0.14 0.76 7.39 -25.92 -0.19 0.57 16 19 H 0.11 -0.75 7.88 -51.93 -0.41 -1.16 16 20 H 0.11 -0.79 8.14 -51.93 -0.42 -1.21 16 21 H 0.10 -0.39 7.92 -51.93 -0.41 -0.80 16 22 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.41 -1.68 8.83 -40.82 -0.36 -2.04 16 24 H 0.18 0.04 8.06 -52.49 -0.42 -0.38 16 25 H 0.13 -0.17 7.96 -51.93 -0.41 -0.59 16 26 H 0.38 -0.56 8.70 45.56 0.40 -0.17 16 27 H -0.24 -0.46 7.11 56.52 0.40 -0.06 16 28 H -0.24 -0.28 7.11 56.52 0.40 0.12 16 29 H 0.08 -0.46 8.14 -51.93 -0.42 -0.88 16 30 H 0.11 -0.70 8.10 -51.93 -0.42 -1.12 16 LS Contribution 281.95 15.07 4.25 4.25 Total: 0.00 -7.87 281.95 -9.19 -17.06 By element: Atomic # 1 Polarization: -6.85 SS G_CDS: -3.33 Total: -10.18 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -2.50 Total: -0.85 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: 0.33 Total: -1.23 kcal Atomic # 8 Polarization: -0.55 SS G_CDS: -0.45 Total: -1.00 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.28 Total: -5.80 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.21 Total: -2.25 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -7.87 -9.19 -17.06 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16534924_15704118.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.509 kcal (2) G-P(sol) polarization free energy of solvation -7.870 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.639 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.062 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds