Wall clock time and date at job start Mon Mar 8 2021 07:11:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50709 * 1 3 3 C 1.33328 * 125.94652 * 2 1 4 4 C 1.50695 * 122.71122 * 359.97438 * 3 2 1 5 5 O 1.42897 * 109.47518 * 330.00360 * 4 3 2 6 6 Si 1.86301 * 109.47300 * 209.99623 * 4 3 2 7 7 N 1.32120 * 114.57684 * 179.75147 * 3 2 1 8 8 C 1.29692 * 116.86143 * 0.47714 * 7 3 2 9 9 N 1.38608 * 124.94412 * 179.81473 * 8 7 3 10 10 C 1.46506 * 120.00014 * 179.71694 * 9 8 7 11 11 H 1.09002 * 112.84852 * 334.66804 * 10 9 8 12 12 C 1.53781 * 113.61361 * 105.86205 * 10 9 8 13 13 C 1.54053 * 86.98540 * 89.16177 * 12 10 9 14 14 H 1.08991 * 113.68778 * 270.87264 * 13 12 10 15 15 C 1.52997 * 113.61632 * 139.97732 * 13 12 10 16 16 C 1.47199 * 109.47488 * 87.50716 * 15 13 12 17 17 N 9.22303 * 148.96336 * 229.67872 * 2 1 3 18 18 C 1.53773 * 113.61686 * 203.47044 * 10 9 8 19 19 S 1.70962 * 110.10335 * 359.54620 * 8 7 3 20 20 H 1.09001 * 109.46724 * 179.97438 * 1 2 3 21 21 H 1.08995 * 109.47387 * 299.97387 * 1 2 3 22 22 H 1.09000 * 109.46930 * 59.97876 * 1 2 3 23 23 H 1.09008 * 109.46793 * 89.99808 * 4 3 2 24 24 H 0.96705 * 113.99936 * 299.99510 * 5 4 3 25 25 H 1.48500 * 109.99428 * 58.68339 * 6 4 3 26 26 H 1.48494 * 110.00315 * 180.02562 * 6 4 3 27 27 H 0.97005 * 120.00459 * 359.71927 * 9 8 7 28 28 H 1.09001 * 113.61158 * 203.66864 * 12 10 9 29 29 H 1.08998 * 113.61196 * 334.56885 * 12 10 9 30 30 H 1.09003 * 109.47110 * 207.51069 * 15 13 12 31 31 H 1.08999 * 109.47327 * 327.50641 * 15 13 12 32 32 H 1.09007 * 113.61678 * 25.42910 * 18 10 9 33 33 H 1.09000 * 113.61916 * 156.33583 * 18 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7413 2.4830 -0.0006 5 8 0.4814 2.5019 -0.6746 6 14 2.9325 3.6148 -0.8786 7 7 3.5850 0.8189 0.0052 8 6 3.9315 -0.4309 0.0000 9 7 5.2384 -0.8924 0.0004 10 6 5.5067 -2.3327 0.0004 11 1 4.6914 -2.9151 0.4298 12 6 5.9986 -2.8677 -1.3548 13 6 7.4258 -2.5479 -0.8711 14 1 7.7522 -1.5356 -1.1088 15 6 8.4564 -3.6107 -1.2574 16 6 8.9945 -3.3095 -2.5940 17 7 9.4097 -3.0770 -3.6255 18 6 6.8897 -2.7018 0.5621 19 16 2.5413 -1.4260 -0.0001 20 1 -0.3633 -1.0277 -0.0005 21 1 -0.3634 0.5134 0.8902 22 1 -0.3633 0.5142 -0.8898 23 1 1.6087 2.8216 1.0271 24 1 0.5240 2.2119 -1.5961 25 1 3.1463 3.1454 -2.2711 26 1 2.4035 5.0023 -0.8854 27 1 5.9756 -0.2618 0.0008 28 1 5.8140 -3.9325 -1.4969 29 1 5.6786 -2.2645 -2.2045 30 1 9.2685 -3.6105 -0.5302 31 1 7.9802 -4.5910 -1.2699 32 1 7.2890 -1.9648 1.2590 33 1 6.9485 -3.7213 0.9431 There are 45 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 45 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16534924_15704122.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:11:24 Heat of formation + Delta-G solvation = 71.119616 kcal Electronic energy + Delta-G solvation = -17412.616809 eV Core-core repulsion = 14567.802451 eV Total energy + Delta-G solvation = -2844.814358 eV No. of doubly occupied orbitals = 45 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.083 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.17702 -40.49689 -37.97865 -37.50507 -35.36852 -32.68686 -30.98184 -29.14392 -26.61696 -25.68917 -24.65213 -24.06561 -20.93706 -20.44222 -18.80219 -18.61112 -17.94889 -17.36054 -16.71961 -16.42449 -15.95940 -15.79714 -15.67548 -15.27246 -14.56086 -14.27853 -14.17421 -14.04967 -13.84425 -13.59333 -13.49934 -13.29121 -13.11253 -12.76169 -12.55720 -12.33607 -11.95688 -11.80399 -11.58678 -11.13884 -10.84715 -10.64693 -10.54551 -10.02531 -8.59947 -4.81574 -0.01698 0.17507 0.74407 1.27928 1.64371 1.81763 1.83988 1.88899 1.94569 1.99760 3.10304 3.28065 3.49682 3.52339 3.70987 3.86364 3.95886 4.15246 4.32597 4.43617 4.49691 4.56674 4.77947 4.80375 4.83914 4.89766 4.93598 4.98814 5.06596 5.13228 5.22206 5.28484 5.38731 5.80537 6.30902 6.43682 6.69017 6.94338 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 C -0.260 4.260 3 C 0.055 3.945 4 C -0.039 4.039 5 O -0.532 6.532 6 Si 0.780 3.220 7 N -0.561 5.561 8 C 0.312 3.688 9 N -0.671 5.671 10 C 0.112 3.888 11 H 0.101 0.899 12 C -0.157 4.157 13 C -0.105 4.105 14 H 0.087 0.913 15 C -0.014 4.014 16 C 0.232 3.768 17 N -0.521 5.521 18 C -0.113 4.113 19 S 0.124 5.876 20 H 0.066 0.934 21 H 0.072 0.928 22 H 0.083 0.917 23 H 0.132 0.868 24 H 0.384 0.616 25 H -0.309 1.309 26 H -0.291 1.291 27 H 0.417 0.583 28 H 0.119 0.881 29 H 0.050 0.950 30 H 0.143 0.857 31 H 0.142 0.858 32 H 0.087 0.913 33 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.905 -5.884 6.381 8.727 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.383 4.383 3 C -0.076 4.076 4 C -0.152 4.152 5 O -0.339 6.339 6 Si 0.686 3.314 7 N -0.289 5.289 8 C -0.059 4.059 9 N -0.311 5.311 10 C 0.007 3.993 11 H 0.119 0.881 12 C -0.196 4.196 13 C -0.125 4.125 14 H 0.105 0.895 15 C -0.053 4.053 16 C -0.084 4.084 17 N -0.200 5.200 18 C -0.151 4.151 19 S 0.374 5.626 20 H 0.084 0.916 21 H 0.090 0.910 22 H 0.102 0.898 23 H 0.150 0.850 24 H 0.234 0.766 25 H -0.237 1.237 26 H -0.219 1.219 27 H 0.256 0.744 28 H 0.138 0.862 29 H 0.069 0.931 30 H 0.160 0.840 31 H 0.159 0.841 32 H 0.106 0.894 33 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.738 -5.675 4.762 7.610 hybrid contribution -0.872 0.766 -0.789 1.404 sum 0.865 -4.910 3.973 6.375 Atomic orbital electron populations 1.20147 0.85756 1.02149 1.03617 1.25386 1.02111 0.93457 1.17310 1.20180 0.87089 0.97533 1.02765 1.24449 0.91597 0.95104 1.04032 1.86598 1.28612 1.89072 1.29641 0.92929 0.85368 0.73967 0.79150 1.65725 1.17251 1.17378 1.28569 1.23540 0.92878 0.91412 0.98115 1.43801 1.00942 1.07355 1.78976 1.22194 1.00161 0.78595 0.98370 0.88115 1.23822 0.95943 1.03228 0.96653 1.22581 0.93212 0.99007 0.97711 0.89454 1.19746 1.00188 1.01776 0.83633 1.30216 0.91499 0.91313 0.95341 1.81327 1.12174 1.11251 1.15224 1.23350 0.91276 1.05373 0.95132 1.83772 0.95604 1.09492 1.73771 0.91550 0.90951 0.89813 0.85009 0.76641 1.23659 1.21910 0.74439 0.86240 0.93110 0.83961 0.84059 0.89412 0.84776 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.01 8.91 71.24 0.63 0.62 16 2 C -0.26 -0.83 6.50 24.58 0.16 -0.67 16 3 C 0.05 0.26 5.91 41.40 0.24 0.50 16 4 C -0.04 -0.11 2.94 71.23 0.21 0.09 16 5 O -0.53 -1.45 10.17 -148.98 -1.52 -2.96 16 6 Si 0.78 3.10 32.09 68.60 2.20 5.30 16 7 N -0.56 -2.85 8.95 -189.87 -1.70 -4.55 16 8 C 0.31 0.50 8.24 179.32 1.48 1.98 16 9 N -0.67 2.92 5.42 -327.90 -1.78 1.14 16 10 C 0.11 -1.10 4.28 45.51 0.19 -0.91 16 11 H 0.10 -1.01 7.11 -2.39 -0.02 -1.03 16 12 C -0.16 1.56 7.45 31.21 0.23 1.80 16 13 C -0.11 1.33 3.51 -10.17 -0.04 1.29 16 14 H 0.09 -0.84 8.12 -2.39 -0.02 -0.86 16 15 C -0.01 0.20 5.54 28.79 0.16 0.36 16 16 C 0.23 -0.30 15.42 89.44 1.38 1.08 16 17 N -0.52 -4.70 18.54 20.01 0.37 -4.33 16 18 C -0.11 1.75 7.38 31.12 0.23 1.98 16 19 S 0.12 0.02 21.71 -56.49 -1.23 -1.20 16 20 H 0.07 -0.11 8.14 -2.39 -0.02 -0.12 16 21 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 22 H 0.08 -0.08 6.39 -2.39 -0.02 -0.10 16 23 H 0.13 0.13 7.96 -2.38 -0.02 0.12 16 24 H 0.38 -0.67 8.13 -74.05 -0.60 -1.27 16 25 H -0.31 -3.31 7.11 99.48 0.71 -2.61 16 26 H -0.29 -2.58 7.11 99.48 0.71 -1.88 16 27 H 0.42 -2.34 8.83 -92.70 -0.82 -3.16 16 28 H 0.12 -1.62 7.90 -2.39 -0.02 -1.64 16 29 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 30 H 0.14 -2.67 8.14 -2.39 -0.02 -2.69 16 31 H 0.14 -2.69 7.85 -2.39 -0.02 -2.71 16 32 H 0.09 -1.31 8.14 -2.38 -0.02 -1.33 16 33 H 0.13 -2.69 8.10 -2.39 -0.02 -2.71 16 Total: 0.00 -21.65 298.27 1.01 -20.64 By element: Atomic # 1 Polarization: -21.93 SS G_CDS: -0.23 Total: -22.16 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: 4.89 Total: 8.12 kcal Atomic # 7 Polarization: -4.64 SS G_CDS: -3.11 Total: -7.74 kcal Atomic # 8 Polarization: -1.45 SS G_CDS: -1.52 Total: -2.96 kcal Atomic # 14 Polarization: 3.10 SS G_CDS: 2.20 Total: 5.30 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -1.23 Total: -1.20 kcal Total: -21.65 1.01 -20.64 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16534924_15704122.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.763 kcal (2) G-P(sol) polarization free energy of solvation -21.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.644 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds