Wall clock time and date at job start Mon Mar 8 2021 07:11:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 C 1.53002 * 109.47286 * 1.39625 * 3 2 1 5 5 H 1.08997 * 112.85163 * 43.80202 * 4 3 2 6 6 C 1.53960 * 113.73882 * 272.59653 * 4 3 2 7 7 C 1.53781 * 87.01766 * 220.05616 * 6 4 3 8 8 H 1.09002 * 113.61445 * 139.95440 * 7 6 4 9 9 N 1.46497 * 113.61305 * 270.77147 * 7 6 4 10 10 C 1.39147 * 120.00203 * 254.13171 * 9 7 6 11 11 N 1.32339 * 119.71576 * 359.73572 * 10 9 7 12 12 C 1.32007 * 121.64532 * 179.75001 * 11 10 9 13 13 C 1.37985 * 120.90113 * 0.52310 * 12 11 10 14 14 C 1.50694 * 120.32687 * 179.72438 * 13 12 11 15 15 O 1.42895 * 109.47076 * 245.01819 * 14 13 12 16 16 Si 1.86300 * 109.47120 * 5.01788 * 14 13 12 17 17 C 1.38903 * 119.34552 * 359.73972 * 13 12 11 18 18 C 1.38444 * 118.48850 * 0.02562 * 17 13 12 19 19 F 1.35100 * 120.47298 * 179.97438 * 18 17 13 20 20 C 1.53782 * 113.61144 * 175.00236 * 4 3 2 21 21 H 1.09000 * 109.47144 * 241.39442 * 3 2 1 22 22 H 1.09004 * 109.46854 * 121.39730 * 3 2 1 23 23 H 1.09001 * 113.66466 * 105.52659 * 6 4 3 24 24 H 1.08997 * 113.61403 * 334.57332 * 6 4 3 25 25 H 0.97006 * 120.00058 * 74.13996 * 9 7 6 26 26 H 1.07998 * 119.55138 * 180.26331 * 12 11 10 27 27 H 1.09004 * 109.47160 * 125.01743 * 14 13 12 28 28 H 0.96696 * 114.00309 * 59.99816 * 15 14 13 29 29 H 1.48508 * 110.00058 * 180.02562 * 16 14 13 30 30 H 1.48495 * 110.00007 * 301.32063 * 16 14 13 31 31 H 1.08006 * 120.75512 * 180.02562 * 17 13 12 32 32 H 1.08993 * 113.61979 * 25.51419 * 20 4 3 33 33 H 1.09000 * 113.61047 * 254.60701 * 20 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1187 -1.4412 -0.0351 5 1 2.5766 -2.0650 -0.7458 6 6 3.2654 -2.0809 1.3576 7 6 4.5678 -2.7146 0.8408 8 1 5.3740 -2.7155 1.5745 9 7 4.3736 -4.0212 0.2075 10 6 4.7587 -5.1811 0.8728 11 7 5.3047 -5.0970 2.0753 12 6 5.6795 -6.1726 2.7425 13 6 5.5239 -7.4323 2.2013 14 6 5.9620 -8.6510 2.9718 15 8 7.0386 -9.2890 2.2821 16 14 6.5291 -8.1404 4.6714 17 6 4.9598 -7.5659 0.9390 18 6 4.5717 -6.4208 0.2646 19 9 4.0192 -6.5041 -0.9654 20 6 4.6475 -1.5502 -0.1606 21 1 2.9711 0.4928 0.9022 22 1 2.9711 0.5362 -0.8772 23 1 2.4875 -2.8085 1.5889 24 1 3.4197 -1.3561 2.1569 25 1 3.9766 -4.0779 -0.6758 26 1 6.1177 -6.0650 3.7237 27 1 5.1258 -9.3445 3.0609 28 1 7.8184 -8.7291 2.1664 29 1 6.9644 -9.3334 5.4413 30 1 7.6481 -7.1703 4.5632 31 1 4.8269 -8.5409 0.4938 32 1 5.1803 -0.6802 0.2229 33 1 4.9838 -1.8503 -1.1531 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16534924_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:11:26 Heat of formation + Delta-G solvation = 22.573055 kcal Electronic energy + Delta-G solvation = -19108.722101 eV Core-core repulsion = 15858.734004 eV Total energy + Delta-G solvation = -3249.988098 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 264.101 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -49.96181 -41.50817 -40.36039 -38.09584 -37.51145 -35.49457 -33.22799 -31.88438 -30.40036 -26.65285 -26.44524 -25.40489 -23.73883 -22.95855 -20.29560 -19.54188 -18.64619 -18.32066 -18.19613 -17.56213 -17.02886 -16.38186 -16.24918 -16.01824 -15.70090 -15.64859 -15.47973 -14.80649 -14.52315 -14.33799 -14.15565 -13.87532 -13.69025 -13.48328 -13.25297 -13.04503 -12.65160 -12.43287 -12.05364 -11.79772 -11.64301 -11.08748 -11.01181 -10.75749 -10.61190 -10.52802 -8.74805 -4.87227 -0.07920 0.10893 1.32817 1.63470 1.82803 1.87689 1.99104 2.00953 2.53846 3.03132 3.09959 3.28106 3.44704 3.60491 3.62670 3.76864 3.85798 3.94730 4.01710 4.04225 4.41627 4.46587 4.53804 4.71493 4.74901 4.81453 4.94066 4.97233 4.98552 5.00251 5.16334 5.23990 5.32465 5.53140 6.06932 6.20990 6.51834 6.67584 6.96989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.519 5.519 2 C 0.233 3.767 3 C -0.013 4.013 4 C -0.106 4.106 5 H 0.084 0.916 6 C -0.151 4.151 7 C 0.123 3.877 8 H 0.103 0.897 9 N -0.699 5.699 10 C 0.385 3.615 11 N -0.522 5.522 12 C 0.147 3.853 13 C -0.204 4.204 14 C -0.069 4.069 15 O -0.549 6.549 16 Si 0.766 3.234 17 C -0.041 4.041 18 C -0.041 4.041 19 F -0.142 7.142 20 C -0.121 4.121 21 H 0.141 0.859 22 H 0.141 0.859 23 H 0.046 0.954 24 H 0.113 0.887 25 H 0.414 0.586 26 H 0.183 0.817 27 H 0.126 0.874 28 H 0.387 0.613 29 H -0.302 1.302 30 H -0.272 1.272 31 H 0.153 0.847 32 H 0.129 0.871 33 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.991 3.159 1.748 6.160 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.197 5.197 2 C -0.083 4.083 3 C -0.053 4.053 4 C -0.126 4.126 5 H 0.102 0.898 6 C -0.190 4.190 7 C 0.018 3.982 8 H 0.121 0.879 9 N -0.331 5.331 10 C 0.146 3.854 11 N -0.239 5.239 12 C -0.010 4.010 13 C -0.209 4.209 14 C -0.178 4.178 15 O -0.357 6.357 16 Si 0.670 3.330 17 C -0.068 4.068 18 C -0.067 4.067 19 F -0.121 7.121 20 C -0.159 4.159 21 H 0.158 0.842 22 H 0.159 0.841 23 H 0.065 0.935 24 H 0.131 0.869 25 H 0.252 0.748 26 H 0.200 0.800 27 H 0.144 0.856 28 H 0.236 0.764 29 H -0.230 1.230 30 H -0.198 1.198 31 H 0.170 0.830 32 H 0.147 0.853 33 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 3.643 3.716 2.690 5.858 hybrid contribution 0.485 -1.302 -1.957 2.400 sum 4.128 2.414 0.732 4.838 Atomic orbital electron populations 1.81312 1.15893 1.10912 1.11629 1.30172 0.96215 0.91057 0.90891 1.19724 0.78173 0.98734 1.08648 1.22568 0.97332 0.94557 0.98103 0.89809 1.23689 0.97551 1.00242 0.97536 1.21939 0.98537 0.81008 0.96751 0.87894 1.44378 1.66039 1.02519 1.20126 1.18566 0.91392 0.85776 0.89641 1.67364 1.16827 1.33324 1.06392 1.22753 0.93047 0.86378 0.98850 1.20893 1.06605 0.96910 0.96526 1.25051 0.93140 0.94854 1.04798 1.86587 1.27136 1.43870 1.78146 0.94114 0.85767 0.78507 0.74575 1.21444 0.93322 0.98044 0.93943 1.18177 1.09816 0.94398 0.84352 1.91464 1.83894 1.96937 1.39843 1.23378 0.94264 0.98297 0.99988 0.84155 0.84122 0.93468 0.86871 0.74791 0.80039 0.85581 0.76391 1.23012 1.19816 0.82978 0.85330 0.90159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -5.19 18.54 20.01 0.37 -4.82 16 2 C 0.23 0.04 15.42 89.44 1.38 1.42 16 3 C -0.01 0.16 5.54 28.79 0.16 0.32 16 4 C -0.11 1.04 3.50 -10.21 -0.04 1.00 16 5 H 0.08 -0.59 8.12 -2.39 -0.02 -0.61 16 6 C -0.15 1.03 7.45 31.18 0.23 1.26 16 7 C 0.12 -0.74 4.33 45.52 0.20 -0.55 16 8 H 0.10 -0.44 7.44 -2.39 -0.02 -0.46 16 9 N -0.70 1.38 5.42 -321.78 -1.74 -0.36 16 10 C 0.38 0.79 7.49 133.08 1.00 1.79 16 11 N -0.52 -0.81 9.15 -193.03 -1.77 -2.58 16 12 C 0.15 -0.24 9.84 84.61 0.83 0.59 16 13 C -0.20 0.31 5.36 -19.77 -0.11 0.20 16 14 C -0.07 0.21 2.82 71.23 0.20 0.41 16 15 O -0.55 -0.19 12.84 -148.98 -1.91 -2.10 16 16 Si 0.77 -3.70 29.91 68.60 2.05 -1.65 16 17 C -0.04 -0.04 9.82 22.48 0.22 0.18 16 18 C -0.04 -0.13 7.35 22.59 0.17 0.04 16 19 F -0.14 -0.70 16.65 44.97 0.75 0.05 16 20 C -0.12 1.44 7.38 31.12 0.23 1.67 16 21 H 0.14 -2.34 7.86 -2.39 -0.02 -2.36 16 22 H 0.14 -2.33 8.14 -2.38 -0.02 -2.35 16 23 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 24 H 0.11 -1.13 7.91 -2.39 -0.02 -1.15 16 25 H 0.41 -1.40 8.18 -92.70 -0.76 -2.15 16 26 H 0.18 -1.18 4.84 -2.91 -0.01 -1.19 16 27 H 0.13 -0.57 7.96 -2.38 -0.02 -0.59 16 28 H 0.39 -2.05 8.70 -74.06 -0.64 -2.70 16 29 H -0.30 -1.04 7.11 99.48 0.71 -0.33 16 30 H -0.27 0.58 7.01 99.48 0.70 1.28 16 31 H 0.15 -0.05 8.06 -2.91 -0.02 -0.07 16 32 H 0.13 -2.08 8.10 -2.39 -0.02 -2.10 16 33 H 0.08 -0.91 8.14 -2.39 -0.02 -0.92 16 Total: 0.00 -20.93 294.50 2.01 -18.91 By element: Atomic # 1 Polarization: -15.58 SS G_CDS: -0.21 Total: -15.79 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: 4.47 Total: 8.33 kcal Atomic # 7 Polarization: -4.62 SS G_CDS: -3.14 Total: -7.75 kcal Atomic # 8 Polarization: -0.19 SS G_CDS: -1.91 Total: -2.10 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 0.75 Total: 0.05 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.05 Total: -1.65 kcal Total: -20.93 2.01 -18.91 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16534924_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.487 kcal (2) G-P(sol) polarization free energy of solvation -20.928 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.015 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.914 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds