Wall clock time and date at job start Mon Mar 8 2021 07:15:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42901 * 113.99578 * 2 1 4 4 C 1.52999 * 109.47053 * 180.02562 * 3 2 1 5 5 H 1.08994 * 112.85014 * 43.80812 * 4 3 2 6 6 C 1.53780 * 113.61351 * 175.00521 * 4 3 2 7 7 C 1.53778 * 87.08374 * 140.06769 * 6 4 3 8 8 H 1.08993 * 113.61642 * 219.93822 * 7 6 4 9 9 N 1.46500 * 113.61570 * 89.11174 * 7 6 4 10 10 C 1.39008 * 119.99906 * 155.00331 * 9 7 6 11 11 N 1.32395 * 119.70234 * 180.02562 * 10 9 7 12 12 C 1.31979 * 121.61533 * 179.97438 * 11 10 9 13 13 C 1.38013 * 120.85998 * 0.02562 * 12 11 10 14 14 C 1.50699 * 120.33417 * 179.97438 * 13 12 11 15 15 O 1.42903 * 109.47152 * 120.00387 * 14 13 12 16 16 Si 1.86293 * 109.47431 * 0.02562 * 14 13 12 17 17 C 1.38881 * 119.33027 * 0.25176 * 13 12 11 18 18 C 1.38303 * 118.50553 * 359.50302 * 17 13 12 19 19 C 1.53779 * 87.07878 * 334.56616 * 7 6 4 20 20 H 1.09001 * 109.46915 * 180.02562 * 1 2 3 21 21 H 1.08996 * 109.46739 * 299.98973 * 1 2 3 22 22 H 1.08993 * 109.47457 * 59.99305 * 1 2 3 23 23 H 1.09000 * 109.46847 * 60.00677 * 3 2 1 24 24 H 1.08997 * 109.47802 * 300.00903 * 3 2 1 25 25 H 1.08999 * 113.61597 * 25.51658 * 6 4 3 26 26 H 1.09004 * 113.61524 * 254.61200 * 6 4 3 27 27 H 0.96993 * 120.00167 * 335.00283 * 9 7 6 28 28 H 1.08000 * 119.56770 * 179.97438 * 12 11 10 29 29 H 1.09008 * 109.47393 * 239.99782 * 14 13 12 30 30 H 0.96700 * 114.00311 * 180.02562 * 15 14 13 31 31 H 1.48506 * 109.99973 * 59.99460 * 16 14 13 32 32 H 1.48493 * 110.00375 * 181.31561 * 16 14 13 33 33 H 1.08003 * 120.74707 * 179.74534 * 17 13 12 34 34 H 1.07998 * 120.44842 * 180.21814 * 18 17 13 35 35 H 1.09005 * 113.61835 * 139.98241 * 19 7 6 36 36 H 1.09001 * 113.61721 * 270.88445 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1848 -0.0006 5 1 3.8999 0.4289 -0.6962 6 6 4.2602 2.5355 -0.1234 7 6 5.2691 1.9986 0.9055 8 1 5.5831 2.7420 1.6381 9 7 6.3959 1.2816 0.3035 10 6 7.6063 1.1945 0.9815 11 7 8.6210 0.5456 0.4317 12 6 9.7867 0.4401 1.0415 13 6 9.9897 1.0067 2.2835 14 6 11.3255 0.8785 2.9693 15 8 11.8692 2.1797 3.2003 16 14 12.4877 -0.0966 1.8882 17 6 8.9489 1.6912 2.8974 18 6 7.7405 1.7897 2.2319 19 6 4.1471 1.0736 1.4059 20 1 -0.3633 -1.0277 0.0005 21 1 -0.3633 0.5137 0.8901 22 1 -0.3634 0.5139 -0.8898 23 1 1.6886 1.8463 0.8901 24 1 1.6885 1.8465 -0.8898 25 1 3.6742 3.3800 0.2393 26 1 4.6927 2.7111 -1.1084 27 1 6.2974 0.8677 -0.5681 28 1 10.5919 -0.0973 0.5627 29 1 11.1970 0.3641 3.9218 30 1 12.7307 2.1737 3.6395 31 1 12.6711 0.5947 0.5867 32 1 13.7986 -0.2573 2.5670 33 1 9.0813 2.1399 3.8708 34 1 6.9112 2.3179 2.6786 35 1 4.4882 0.0689 1.6555 36 1 3.5302 1.5184 2.1867 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16535614_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:15:17 Heat of formation + Delta-G solvation = -1.735817 kcal Electronic energy + Delta-G solvation = -17952.858840 eV Core-core repulsion = 15018.928988 eV Total energy + Delta-G solvation = -2933.929853 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.131 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.50335 -40.44943 -38.45482 -37.84308 -35.31012 -33.33965 -31.39500 -29.57739 -27.11551 -26.76837 -26.05925 -24.87435 -23.48453 -22.38334 -20.32083 -18.86413 -18.46343 -17.81902 -17.41877 -16.93234 -16.60901 -16.52984 -16.19897 -15.51729 -15.35962 -15.22566 -14.76840 -14.33661 -14.01320 -13.85662 -13.81182 -13.75358 -13.54776 -12.95977 -12.47825 -12.29004 -11.95449 -11.88784 -11.67406 -11.34764 -11.03332 -10.66606 -10.60090 -10.51829 -10.23698 -8.63599 -4.93628 0.32338 0.51000 1.32403 1.61861 1.99125 2.05793 2.71730 2.86813 3.36378 3.41616 3.52640 3.65275 3.72563 3.84405 3.89829 4.02797 4.16769 4.26031 4.27295 4.36886 4.39448 4.45588 4.50712 4.52691 4.57483 4.64528 4.69376 4.75767 4.82071 4.99748 5.01626 5.11146 5.19600 5.39624 5.60535 6.07478 6.18198 6.47158 6.59136 7.23240 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.108 4.108 5 H 0.099 0.901 6 C -0.139 4.139 7 C 0.129 3.871 8 H 0.099 0.901 9 N -0.704 5.704 10 C 0.410 3.590 11 N -0.538 5.538 12 C 0.159 3.841 13 C -0.189 4.189 14 C -0.060 4.060 15 O -0.538 6.538 16 Si 0.675 3.325 17 C -0.005 4.005 18 C -0.238 4.238 19 C -0.148 4.148 20 H 0.087 0.913 21 H 0.041 0.959 22 H 0.041 0.959 23 H 0.051 0.949 24 H 0.050 0.950 25 H 0.098 0.902 26 H 0.079 0.921 27 H 0.407 0.593 28 H 0.156 0.844 29 H 0.074 0.926 30 H 0.379 0.621 31 H -0.253 1.253 32 H -0.260 1.260 33 H 0.134 0.866 34 H 0.135 0.865 35 H 0.076 0.924 36 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.590 0.040 1.895 3.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.007 4.007 4 C -0.127 4.127 5 H 0.117 0.883 6 C -0.177 4.177 7 C 0.022 3.978 8 H 0.117 0.883 9 N -0.336 5.336 10 C 0.174 3.826 11 N -0.255 5.255 12 C 0.001 3.999 13 C -0.194 4.194 14 C -0.170 4.170 15 O -0.345 6.345 16 Si 0.576 3.424 17 C -0.031 4.031 18 C -0.263 4.263 19 C -0.187 4.187 20 H 0.105 0.895 21 H 0.060 0.940 22 H 0.060 0.940 23 H 0.070 0.930 24 H 0.069 0.931 25 H 0.117 0.883 26 H 0.098 0.902 27 H 0.243 0.757 28 H 0.172 0.828 29 H 0.092 0.908 30 H 0.227 0.773 31 H -0.178 1.178 32 H -0.185 1.185 33 H 0.152 0.848 34 H 0.153 0.847 35 H 0.095 0.905 36 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.538 -0.220 0.443 2.586 hybrid contribution 0.326 1.332 1.159 1.796 sum -2.213 1.112 1.602 2.949 Atomic orbital electron populations 1.22761 0.80842 1.02995 1.00011 1.87901 1.19808 1.27832 1.95404 1.22559 0.93023 0.84910 1.00231 1.22569 0.93089 0.98300 0.98728 0.88262 1.23354 0.96888 0.97161 1.00299 1.21830 0.85201 0.94451 0.96308 0.88272 1.44136 1.08013 1.59393 1.22051 1.18352 0.86096 0.89594 0.88535 1.67156 1.00300 1.21561 1.36485 1.22131 0.93243 0.94241 0.90253 1.19912 0.95508 1.06405 0.97532 1.24521 0.97800 0.89928 1.04794 1.86591 1.38910 1.26847 1.82194 0.95216 0.79619 0.87991 0.79542 1.21166 0.90794 0.92271 0.98834 1.21478 1.00085 1.08159 0.96534 1.23582 0.97175 1.01292 0.96681 0.89483 0.94025 0.94017 0.93042 0.93145 0.88313 0.90232 0.75688 0.82782 0.90765 0.77348 1.17760 1.18501 0.84772 0.84743 0.90497 0.88995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.75 10.70 -35.23 -0.38 -1.13 16 3 C 0.07 -0.03 5.78 37.16 0.21 0.18 16 4 C -0.11 0.12 3.88 -89.81 -0.35 -0.23 16 5 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 6 C -0.14 0.32 7.39 -25.92 -0.19 0.13 16 7 C 0.13 -0.18 4.11 -67.12 -0.28 -0.46 16 8 H 0.10 -0.20 6.10 -51.93 -0.32 -0.52 16 9 N -0.70 -0.36 5.44 -53.15 -0.29 -0.65 16 10 C 0.41 1.06 7.65 -155.02 -1.19 -0.12 16 11 N -0.54 -2.05 10.39 -12.44 -0.13 -2.18 16 12 C 0.16 0.40 9.84 -17.57 -0.17 0.23 16 13 C -0.19 -0.39 5.43 -104.47 -0.57 -0.95 16 14 C -0.06 -0.02 2.83 36.01 0.10 0.08 16 15 O -0.54 -0.76 12.76 -35.23 -0.45 -1.21 16 16 Si 0.68 -0.33 29.82 -169.99 -5.07 -5.40 16 17 C 0.00 -0.01 9.77 -39.32 -0.38 -0.39 16 18 C -0.24 -0.37 9.29 -39.22 -0.36 -0.73 16 19 C -0.15 0.17 7.43 -25.92 -0.19 -0.02 16 20 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 23 H 0.05 -0.07 7.85 -51.93 -0.41 -0.48 16 24 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 26 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 27 H 0.41 0.10 8.82 -40.82 -0.36 -0.26 16 28 H 0.16 0.07 4.88 -52.49 -0.26 -0.19 16 29 H 0.07 -0.11 7.96 -51.92 -0.41 -0.52 16 30 H 0.38 -0.98 8.74 45.56 0.40 -0.58 16 31 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 32 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 33 H 0.13 0.04 8.06 -52.48 -0.42 -0.38 16 34 H 0.13 -0.06 6.04 -52.49 -0.32 -0.38 16 35 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 36 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 LS Contribution 299.17 15.07 4.51 4.51 Total: 0.00 -6.40 299.17 -9.14 -15.54 By element: Atomic # 1 Polarization: -3.20 SS G_CDS: -5.08 Total: -8.28 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -2.25 Total: -1.19 kcal Atomic # 7 Polarization: -2.42 SS G_CDS: -0.42 Total: -2.83 kcal Atomic # 8 Polarization: -1.52 SS G_CDS: -0.83 Total: -2.34 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.07 Total: -5.40 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -6.40 -9.14 -15.54 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16535614_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.804 kcal (2) G-P(sol) polarization free energy of solvation -6.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.540 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds