Wall clock time and date at job start Mon Mar 8 2021 07:16:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47442 * 2 1 4 4 C 1.50704 * 109.47325 * 120.00146 * 2 1 3 5 5 C 1.38014 * 120.33802 * 245.24860 * 4 2 1 6 6 N 1.31971 * 120.86181 * 180.28318 * 5 4 2 7 7 C 1.32399 * 121.61774 * 359.74298 * 6 5 4 8 8 N 1.39008 * 119.70614 * 180.02562 * 7 6 5 9 9 C 1.46495 * 119.99962 * 179.97438 * 8 7 6 10 10 H 1.08998 * 112.84965 * 336.19098 * 9 8 7 11 11 C 1.53780 * 113.61710 * 107.49991 * 9 8 7 12 12 C 1.53783 * 87.08317 * 139.98225 * 11 9 8 13 13 H 1.08993 * 113.61780 * 89.11698 * 12 11 9 14 14 C 1.53005 * 113.61071 * 220.02304 * 12 11 9 15 15 O 1.42904 * 109.46569 * 272.48912 * 14 12 11 16 16 C 1.35896 * 116.99414 * 179.97438 * 15 14 12 17 17 C 1.38731 * 120.06161 * 359.73252 * 16 15 14 18 18 C 1.38141 * 119.94635 * 179.69622 * 17 16 15 19 19 C 1.38268 * 120.05452 * 0.59996 * 18 17 16 20 20 C 1.38257 * 120.11210 * 359.66983 * 19 18 17 21 21 C 1.38147 * 120.05748 * 0.03228 * 20 19 18 22 22 C 1.53778 * 113.61391 * 204.99568 * 9 8 7 23 23 C 1.39137 * 120.59181 * 359.97368 * 7 6 5 24 24 C 1.38307 * 119.09401 * 0.02562 * 23 7 6 25 25 H 0.96705 * 114.00115 * 59.99920 * 1 2 3 26 26 H 1.09008 * 109.46992 * 239.99799 * 2 1 3 27 27 H 1.48497 * 109.99892 * 59.99937 * 3 2 1 28 28 H 1.48503 * 110.00380 * 181.31930 * 3 2 1 29 29 H 1.08008 * 119.57374 * 0.02562 * 5 4 2 30 30 H 0.96999 * 119.99949 * 359.97289 * 8 7 6 31 31 H 1.09006 * 113.60825 * 254.52762 * 11 9 8 32 32 H 1.08995 * 113.61367 * 25.42870 * 11 9 8 33 33 H 1.08992 * 109.47342 * 32.49015 * 14 12 11 34 34 H 1.09001 * 109.46898 * 152.49473 * 14 12 11 35 35 H 1.07997 * 120.02381 * 359.97438 * 17 16 15 36 36 H 1.07998 * 119.97572 * 180.27442 * 18 17 16 37 37 H 1.08006 * 119.94468 * 179.70377 * 19 18 17 38 38 H 1.08000 * 119.97481 * 180.02562 * 20 19 18 39 39 H 1.07997 * 120.02986 * 180.02562 * 21 20 19 40 40 H 1.09000 * 113.61530 * 334.56882 * 22 9 8 41 41 H 1.09007 * 113.61655 * 105.38355 * 22 9 8 42 42 H 1.07998 * 120.45618 * 180.02562 * 23 7 6 43 43 H 1.08002 * 120.74429 * 179.97438 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6339 -0.0192 2.1965 6 7 3.0834 -0.6321 3.2754 7 6 2.8763 -1.9242 3.4766 8 7 3.3673 -2.5295 4.6276 9 6 3.1414 -3.9587 4.8570 10 1 2.2733 -4.3414 4.3205 11 6 4.4046 -4.8180 4.6815 12 6 3.9343 -5.6195 5.9067 13 1 3.2837 -6.4575 5.6569 14 6 5.0688 -6.0089 6.8567 15 8 5.6380 -7.2501 6.4352 16 6 6.6658 -7.7407 7.1766 17 6 7.1210 -7.0392 8.2835 18 6 8.1619 -7.5432 9.0391 19 6 8.7582 -8.7396 8.6858 20 6 8.3101 -9.4379 7.5798 21 6 7.2655 -8.9412 6.8245 22 6 3.1725 -4.3566 6.3421 23 6 2.1708 -2.6815 2.5467 24 6 1.6875 -2.0664 1.4062 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5139 -0.8900 27 1 1.5615 2.4678 1.2085 28 1 3.5346 1.7702 -0.0321 29 1 2.8219 1.0364 2.0660 30 1 3.8595 -2.0056 5.2789 31 1 4.4137 -5.3972 3.7581 32 1 5.3320 -4.2700 4.8479 33 1 5.8356 -5.2345 6.8435 34 1 4.6759 -6.1141 7.8679 35 1 6.6590 -6.1021 8.5569 36 1 8.5137 -6.9996 9.9035 37 1 9.5750 -9.1296 9.2750 38 1 8.7772 -10.3723 7.3060 39 1 6.9155 -9.4872 5.9609 40 1 3.7630 -3.6825 6.9625 41 1 2.1868 -4.5619 6.7599 42 1 2.0028 -3.7353 2.7133 43 1 1.1367 -2.6288 0.6667 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16536078_13915762.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:16:49 Heat of formation + Delta-G solvation = 32.780385 kcal Electronic energy + Delta-G solvation = -24199.832220 eV Core-core repulsion = 20598.956921 eV Total energy + Delta-G solvation = -3600.875299 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.61153 -41.12866 -40.18082 -38.23933 -37.76749 -35.56297 -33.43924 -32.06210 -31.59286 -30.88344 -29.06159 -26.94251 -26.38028 -24.94813 -24.21543 -23.37409 -22.77366 -21.94067 -20.86861 -19.21216 -18.76390 -18.44619 -18.08836 -17.30539 -16.97635 -16.80790 -16.57307 -16.30948 -16.08801 -15.46117 -15.37419 -15.31260 -15.01531 -14.45895 -14.33073 -14.23073 -14.12564 -13.87880 -13.76493 -13.66730 -13.40538 -13.03242 -12.59304 -12.44251 -12.27072 -12.19960 -12.01734 -11.90309 -11.73817 -11.41725 -11.09471 -10.72164 -10.56745 -10.18250 -9.95123 -9.15326 -8.71241 -4.97935 0.22545 0.39309 0.43028 0.51056 1.30109 1.65465 1.94984 1.98340 2.20958 2.79674 2.85647 3.23757 3.32773 3.46896 3.49863 3.59691 3.61084 3.83278 3.85789 3.90300 3.95610 4.08246 4.10626 4.14122 4.19669 4.25638 4.32699 4.39572 4.45773 4.47324 4.50522 4.55646 4.58817 4.71512 4.72203 4.82887 4.87804 5.00414 5.05714 5.12563 5.31437 5.34977 5.47259 5.50362 5.61295 5.82365 5.98153 6.44866 6.49952 6.64633 7.13904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.056 4.056 3 Si 0.677 3.323 4 C -0.190 4.190 5 C 0.151 3.849 6 N -0.540 5.540 7 C 0.407 3.593 8 N -0.711 5.711 9 C 0.131 3.869 10 H 0.114 0.886 11 C -0.148 4.148 12 C -0.107 4.107 13 H 0.108 0.892 14 C 0.071 3.929 15 O -0.313 6.313 16 C 0.129 3.871 17 C -0.211 4.211 18 C -0.080 4.080 19 C -0.159 4.159 20 C -0.080 4.080 21 C -0.153 4.153 22 C -0.135 4.135 23 C -0.237 4.237 24 C -0.003 4.003 25 H 0.381 0.619 26 H 0.072 0.928 27 H -0.249 1.249 28 H -0.253 1.253 29 H 0.146 0.854 30 H 0.406 0.594 31 H 0.078 0.922 32 H 0.088 0.912 33 H 0.064 0.936 34 H 0.065 0.935 35 H 0.126 0.874 36 H 0.125 0.875 37 H 0.124 0.876 38 H 0.130 0.870 39 H 0.130 0.870 40 H 0.091 0.909 41 H 0.084 0.916 42 H 0.136 0.864 43 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.781 -0.541 -1.833 2.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.167 4.167 3 Si 0.579 3.421 4 C -0.195 4.195 5 C -0.006 4.006 6 N -0.257 5.257 7 C 0.172 3.828 8 N -0.343 5.343 9 C 0.025 3.975 10 H 0.131 0.869 11 C -0.187 4.187 12 C -0.126 4.126 13 H 0.126 0.874 14 C -0.004 4.004 15 O -0.227 6.227 16 C 0.084 3.916 17 C -0.230 4.230 18 C -0.098 4.098 19 C -0.177 4.177 20 C -0.098 4.098 21 C -0.172 4.172 22 C -0.174 4.174 23 C -0.262 4.262 24 C -0.028 4.028 25 H 0.229 0.771 26 H 0.090 0.910 27 H -0.174 1.174 28 H -0.178 1.178 29 H 0.163 0.837 30 H 0.242 0.758 31 H 0.096 0.904 32 H 0.107 0.893 33 H 0.082 0.918 34 H 0.083 0.917 35 H 0.144 0.856 36 H 0.143 0.857 37 H 0.142 0.858 38 H 0.148 0.852 39 H 0.148 0.852 40 H 0.109 0.891 41 H 0.103 0.897 42 H 0.154 0.846 43 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 0.115 -0.047 -0.381 0.400 hybrid contribution -0.120 -0.635 0.060 0.649 sum -0.005 -0.682 -0.321 0.754 Atomic orbital electron populations 1.86499 1.17486 1.81764 1.49664 1.24429 0.85454 1.09963 0.96899 0.95327 0.80953 0.78326 0.87536 1.20020 1.05859 0.95331 0.98277 1.22035 0.92349 0.98414 0.87814 1.67131 1.25945 1.09198 1.23378 1.18423 0.89117 0.88299 0.86972 1.44505 1.60157 1.08674 1.20934 1.22524 0.98767 0.79460 0.96773 0.86872 1.23658 0.98637 0.97672 0.98763 1.22356 0.96682 0.97371 0.96169 0.87363 1.22799 0.95003 0.84340 0.98242 1.86070 1.46164 1.38314 1.52105 1.19028 0.88271 0.93533 0.90795 1.21269 1.01769 1.02041 0.97877 1.20995 0.94689 0.95592 0.98571 1.21124 1.01750 0.96251 0.98610 1.21027 0.95157 0.99392 0.94251 1.20491 0.98711 0.95384 1.02604 1.23365 1.01599 0.96214 0.96202 1.21493 1.06442 1.01478 0.96762 1.21192 0.92799 0.93299 0.95537 0.77125 0.90985 1.17380 1.17806 0.83700 0.75767 0.90353 0.89325 0.91783 0.91651 0.85609 0.85726 0.85767 0.85221 0.85163 0.89063 0.89735 0.84614 0.84427 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.21 12.82 -35.23 -0.45 -0.66 16 2 C -0.06 -0.01 2.81 36.01 0.10 0.09 16 3 Si 0.68 -0.48 29.88 -169.99 -5.08 -5.56 16 4 C -0.19 -0.56 5.39 -104.46 -0.56 -1.13 16 5 C 0.15 0.65 9.84 -17.57 -0.17 0.47 16 6 N -0.54 -2.70 10.39 -12.44 -0.13 -2.83 16 7 C 0.41 1.27 7.65 -155.01 -1.19 0.08 16 8 N -0.71 -0.37 5.53 -53.15 -0.29 -0.67 16 9 C 0.13 -0.21 4.03 -67.12 -0.27 -0.48 16 10 H 0.11 -0.25 6.10 -51.93 -0.32 -0.56 16 11 C -0.15 0.21 7.43 -25.92 -0.19 0.02 16 12 C -0.11 0.21 4.01 -89.80 -0.36 -0.15 16 13 H 0.11 -0.21 8.14 -51.93 -0.42 -0.64 16 14 C 0.07 -0.06 4.58 37.16 0.17 0.11 16 15 O -0.31 -0.62 10.14 -19.41 -0.20 -0.82 16 16 C 0.13 0.31 6.69 -39.21 -0.26 0.04 16 17 C -0.21 -0.29 9.04 -39.43 -0.36 -0.64 16 18 C -0.08 -0.08 10.04 -39.61 -0.40 -0.47 16 19 C -0.16 -0.14 10.04 -39.56 -0.40 -0.54 16 20 C -0.08 -0.08 10.04 -39.61 -0.40 -0.48 16 21 C -0.15 -0.30 9.99 -39.43 -0.39 -0.69 16 22 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 23 C -0.24 -0.45 9.29 -39.22 -0.36 -0.81 16 24 C 0.00 -0.01 9.84 -39.32 -0.39 -0.39 16 25 H 0.38 -1.79 8.74 45.56 0.40 -1.39 16 26 H 0.07 -0.11 7.96 -51.92 -0.41 -0.52 16 27 H -0.25 -0.62 7.05 56.52 0.40 -0.22 16 28 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 29 H 0.15 0.50 4.87 -52.48 -0.26 0.24 16 30 H 0.41 0.02 8.85 -40.82 -0.36 -0.34 16 31 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 33 H 0.06 -0.08 7.35 -51.93 -0.38 -0.47 16 34 H 0.07 -0.10 7.68 -51.93 -0.40 -0.50 16 35 H 0.13 -0.05 6.30 -52.49 -0.33 -0.38 16 36 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 -0.11 8.06 -52.48 -0.42 -0.54 16 38 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.13 0.11 8.06 -52.49 -0.42 -0.31 16 40 H 0.09 -0.29 8.08 -51.93 -0.42 -0.71 16 41 H 0.08 -0.26 8.14 -51.92 -0.42 -0.69 16 42 H 0.14 -0.06 6.03 -52.49 -0.32 -0.38 16 43 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 LS Contribution 355.57 15.07 5.36 5.36 Total: 0.00 -7.71 355.57 -12.20 -19.91 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -5.79 Total: -9.95 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -5.62 Total: -4.78 kcal Atomic # 7 Polarization: -3.07 SS G_CDS: -0.42 Total: -3.50 kcal Atomic # 8 Polarization: -0.83 SS G_CDS: -0.65 Total: -1.48 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -5.08 Total: -5.56 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -7.71 -12.20 -19.91 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16536078_13915762.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.693 kcal (2) G-P(sol) polarization free energy of solvation -7.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.913 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds