Wall clock time and date at job start Mon Mar 8 2021 08:05:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86301 * 109.46870 * 2 1 4 4 C 1.50697 * 109.47432 * 120.00275 * 2 1 3 5 5 C 1.37988 * 120.32520 * 245.00278 * 4 2 1 6 6 N 1.32011 * 120.89866 * 180.30297 * 5 4 2 7 7 C 1.32333 * 121.64646 * 359.42528 * 6 5 4 8 8 N 1.39143 * 119.72053 * 180.29769 * 7 6 5 9 9 C 1.46499 * 119.99665 * 0.26893 * 8 7 6 10 10 H 1.09004 * 109.47138 * 325.00199 * 9 8 7 11 11 C 1.53002 * 109.47153 * 85.00503 * 9 8 7 12 12 C 1.53000 * 109.47065 * 180.02562 * 11 9 8 13 13 C 1.53006 * 109.46972 * 299.99593 * 12 11 9 14 14 H 1.08999 * 109.47430 * 300.00496 * 13 12 11 15 15 N 1.46896 * 109.46991 * 180.02562 * 13 12 11 16 16 H 1.00895 * 109.48556 * 300.00233 * 15 13 12 17 17 C 1.46941 * 109.47548 * 179.97438 * 15 13 12 18 18 C 1.53074 * 109.37680 * 179.97438 * 17 15 13 19 19 O 1.43041 * 109.25685 * 57.63040 * 18 17 15 20 20 C 1.43031 * 113.64807 * 302.10455 * 19 18 17 21 21 C 1.46942 * 109.48002 * 60.02326 * 15 13 12 22 22 C 1.53002 * 109.46893 * 60.00302 * 13 12 11 23 23 C 1.53000 * 109.47065 * 299.99641 * 22 13 12 24 24 C 1.39349 * 120.56302 * 0.56551 * 7 6 5 25 25 F 1.35103 * 120.47149 * 179.74404 * 24 7 6 26 26 C 1.38444 * 119.05742 * 359.73072 * 24 7 6 27 27 H 0.96698 * 113.99776 * 299.99432 * 1 2 3 28 28 H 1.09000 * 109.46571 * 240.00110 * 2 1 3 29 29 H 1.48501 * 110.00212 * 300.00134 * 3 2 1 30 30 H 1.48497 * 110.00096 * 61.32372 * 3 2 1 31 31 H 1.08002 * 119.54703 * 0.02562 * 5 4 2 32 32 H 0.96999 * 120.00260 * 180.27344 * 8 7 6 33 33 H 1.09002 * 109.46961 * 299.99956 * 11 9 8 34 34 H 1.08999 * 109.46924 * 59.99954 * 11 9 8 35 35 H 1.09004 * 109.46904 * 179.97438 * 12 11 9 36 36 H 1.08996 * 109.47192 * 59.99354 * 12 11 9 37 37 H 1.08995 * 109.49160 * 299.96066 * 17 15 13 38 38 H 1.09000 * 109.48702 * 60.02546 * 17 15 13 39 39 H 1.09003 * 109.50557 * 297.70371 * 18 17 15 40 40 H 1.09001 * 109.54809 * 177.59135 * 18 17 15 41 41 H 1.09001 * 109.51141 * 297.96286 * 20 19 18 42 42 H 1.09005 * 109.54138 * 177.85569 * 20 19 18 43 43 H 1.09002 * 109.48322 * 299.98136 * 21 15 13 44 44 H 1.08998 * 109.48852 * 60.01256 * 21 15 13 45 45 H 1.09002 * 109.46961 * 179.97438 * 22 13 12 46 46 H 1.08999 * 109.46924 * 59.99884 * 22 13 12 47 47 H 1.08991 * 109.47297 * 300.00192 * 23 22 13 48 48 H 1.09004 * 109.46904 * 180.02562 * 23 22 13 49 49 H 1.07997 * 120.75322 * 180.02562 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6382 -0.0201 2.1937 6 7 3.0887 -0.6324 3.2730 7 6 2.8736 -1.9215 3.4807 8 7 3.3615 -2.5250 4.6356 9 6 4.1048 -1.7324 5.6182 10 1 4.6984 -0.9777 5.1021 11 6 3.1216 -1.0458 6.5685 12 6 3.8978 -0.2175 7.5943 13 6 4.8244 -1.1350 8.3947 14 1 4.2311 -1.8897 8.9110 15 7 5.5692 -0.3399 9.3800 16 1 6.1185 0.3590 8.9025 17 6 6.4587 -1.2210 10.1491 18 6 7.2341 -0.3901 11.1746 19 8 6.3087 0.2939 12.0243 20 6 5.4041 1.1474 11.3179 21 6 4.6248 0.3187 10.2929 22 6 5.8076 -1.8216 7.4444 23 6 5.0313 -2.6499 6.4186 24 6 2.1673 -2.6810 2.5500 25 9 1.9532 -3.9981 2.7615 26 6 1.6879 -2.0667 1.4057 27 1 -0.3933 0.4416 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 1.5614 2.4680 -1.2085 30 1 1.5879 2.4585 1.2243 31 1 2.8293 1.0345 2.0607 32 1 3.2096 -3.4705 4.7901 33 1 2.4618 -0.3919 5.9983 34 1 2.5280 -1.8005 7.0845 35 1 3.1974 0.2720 8.2710 36 1 4.4912 0.5370 7.0779 37 1 5.8653 -1.9753 10.6659 38 1 7.1598 -1.7100 9.4729 39 1 7.8584 0.3376 10.6561 40 1 7.8631 -1.0469 11.7755 41 1 5.9658 1.9277 10.8043 42 1 4.7081 1.6034 12.0220 43 1 3.9645 0.9727 9.7233 44 1 4.0318 -0.4361 10.8093 45 1 6.4680 -2.4749 8.0147 46 1 6.4008 -1.0669 6.9281 47 1 4.4381 -3.4045 6.9349 48 1 5.7318 -3.1394 5.7419 49 1 1.1368 -2.6290 0.6666 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16607402_17656566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:05:01 Heat of formation + Delta-G solvation = 56.621489 kcal Electronic energy + Delta-G solvation = -30424.123367 eV Core-core repulsion = 26193.811835 eV Total energy + Delta-G solvation = -4230.311532 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.187 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -50.76521 -45.59366 -42.48076 -41.55592 -39.91646 -38.78395 -36.91677 -35.43223 -34.23314 -33.69027 -33.33164 -31.72754 -29.97196 -28.19061 -27.39212 -26.24275 -25.84261 -25.37768 -24.80784 -23.76677 -23.06234 -21.14134 -20.58752 -20.18158 -19.91962 -19.60369 -19.25640 -19.19556 -18.78007 -18.48842 -18.17658 -17.94045 -17.78884 -17.32044 -17.08043 -16.97805 -16.73822 -16.38010 -16.29242 -16.21373 -16.12281 -15.96973 -15.61104 -15.21171 -15.16504 -14.98779 -14.91068 -14.89068 -14.59317 -14.44605 -14.20058 -14.13795 -13.98258 -13.58350 -13.45127 -13.14729 -13.04879 -12.78083 -12.39898 -11.65468 -11.58478 -11.37693 -9.82626 -5.74586 -1.63339 -1.00000 -0.80671 0.26836 0.31210 0.46923 0.50779 0.62744 0.75111 0.78241 0.93411 1.20073 1.24738 1.28815 1.46234 1.51635 1.60486 1.66414 1.76119 1.83328 1.94339 2.05231 2.10467 2.11631 2.26197 2.26716 2.29450 2.41107 2.42897 2.48001 2.55064 2.60475 2.64050 2.71084 2.72333 2.77839 2.87537 2.94827 2.96970 3.11698 3.19422 3.33032 3.50750 3.60747 3.64346 3.72706 3.83063 3.85728 4.12646 4.39151 4.85036 5.08024 5.62244 5.90833 Molecular weight = 339.19amu Principal moments of inertia in cm(-1) A = 0.018286 B = 0.002511 C = 0.002308 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1530.893050 B =11149.979372 C =12131.090025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.066 4.066 3 Si 0.685 3.315 4 C -0.194 4.194 5 C 0.142 3.858 6 N -0.514 5.514 7 C 0.383 3.617 8 N -0.719 5.719 9 C 0.156 3.844 10 H 0.099 0.901 11 C -0.129 4.129 12 C -0.136 4.136 13 C 0.023 3.977 14 H 0.138 0.862 15 N -0.383 5.383 16 H 0.421 0.579 17 C -0.048 4.048 18 C 0.037 3.963 19 O -0.357 6.357 20 C 0.037 3.963 21 C -0.048 4.048 22 C -0.135 4.135 23 C -0.128 4.128 24 C -0.012 4.012 25 F -0.131 7.131 26 C -0.037 4.037 27 H 0.376 0.624 28 H 0.123 0.877 29 H -0.251 1.251 30 H -0.257 1.257 31 H 0.166 0.834 32 H 0.414 0.586 33 H 0.091 0.909 34 H 0.074 0.926 35 H 0.090 0.910 36 H 0.091 0.909 37 H 0.139 0.861 38 H 0.144 0.856 39 H 0.081 0.919 40 H 0.142 0.858 41 H 0.081 0.919 42 H 0.142 0.858 43 H 0.144 0.856 44 H 0.139 0.861 45 H 0.093 0.907 46 H 0.092 0.908 47 H 0.080 0.920 48 H 0.094 0.906 49 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.132 2.683 18.378 21.653 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.177 4.177 3 Si 0.586 3.414 4 C -0.199 4.199 5 C -0.014 4.014 6 N -0.230 5.230 7 C 0.146 3.854 8 N -0.353 5.353 9 C 0.050 3.950 10 H 0.117 0.883 11 C -0.169 4.169 12 C -0.175 4.175 13 C -0.078 4.078 14 H 0.156 0.844 15 N 0.039 4.961 16 H 0.257 0.743 17 C -0.170 4.170 18 C -0.041 4.041 19 O -0.274 6.274 20 C -0.041 4.041 21 C -0.169 4.169 22 C -0.173 4.173 23 C -0.166 4.166 24 C -0.038 4.038 25 F -0.110 7.110 26 C -0.064 4.064 27 H 0.224 0.776 28 H 0.141 0.859 29 H -0.175 1.175 30 H -0.182 1.182 31 H 0.183 0.817 32 H 0.252 0.748 33 H 0.109 0.891 34 H 0.093 0.907 35 H 0.109 0.891 36 H 0.110 0.890 37 H 0.157 0.843 38 H 0.162 0.838 39 H 0.099 0.901 40 H 0.160 0.840 41 H 0.099 0.901 42 H 0.159 0.841 43 H 0.162 0.838 44 H 0.157 0.843 45 H 0.112 0.888 46 H 0.111 0.889 47 H 0.099 0.901 48 H 0.112 0.888 49 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 11.409 3.528 18.902 22.359 hybrid contribution -1.613 -1.171 -0.520 2.060 sum 9.796 2.357 18.382 20.962 Atomic orbital electron populations 1.86666 1.17410 1.79816 1.49325 1.24906 0.84132 1.11006 0.97640 0.95208 0.91222 0.74006 0.81001 1.20966 1.04606 0.94433 0.99883 1.22423 0.91790 0.99648 0.87587 1.67229 1.25015 1.07139 1.23660 1.18325 0.91084 0.89139 0.86840 1.44373 1.60288 1.11963 1.18711 1.20912 0.91812 0.93628 0.88646 0.88327 1.21968 0.98629 0.99938 0.96329 1.22101 0.98522 0.98057 0.98782 1.23784 0.96381 0.96595 0.91070 0.84388 1.45676 1.16820 1.17481 1.16092 0.74301 1.24713 0.97433 0.96335 0.98473 1.23266 0.91427 0.96509 0.92872 1.88405 1.46732 1.60076 1.32181 1.23272 0.93569 0.91665 0.95550 1.24723 0.94656 1.02752 0.94803 1.22058 0.97184 1.00960 0.97069 1.21782 0.99193 0.98102 0.97544 1.18021 1.07976 0.79610 0.98229 1.91521 1.93568 1.31083 1.94835 1.21418 0.95247 0.94527 0.95186 0.77604 0.85913 1.17505 1.18207 0.81737 0.74823 0.89050 0.90717 0.89140 0.89001 0.84322 0.83829 0.90070 0.84036 0.90053 0.84050 0.83820 0.84331 0.88816 0.88936 0.90103 0.88790 0.82945 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 4.17 12.84 -35.23 -0.45 3.72 16 2 C -0.07 0.67 2.82 36.00 0.10 0.77 16 3 Si 0.69 -7.33 29.91 -169.99 -5.08 -12.41 16 4 C -0.19 2.03 5.36 -104.47 -0.56 1.47 16 5 C 0.14 -1.63 9.84 -17.57 -0.17 -1.80 16 6 N -0.51 6.00 9.20 -12.36 -0.11 5.89 16 7 C 0.38 -4.44 7.47 -154.86 -1.16 -5.59 16 8 N -0.72 10.81 5.23 -53.84 -0.28 10.53 16 9 C 0.16 -2.97 2.47 -67.93 -0.17 -3.14 16 10 H 0.10 -1.77 7.54 -51.93 -0.39 -2.16 16 11 C -0.13 2.66 5.51 -26.73 -0.15 2.51 16 12 C -0.14 3.49 4.90 -26.73 -0.13 3.36 16 13 C 0.02 -0.65 1.61 -67.71 -0.11 -0.76 16 14 H 0.14 -3.94 8.14 -51.93 -0.42 -4.36 16 15 N -0.38 11.67 0.24 -226.46 -0.05 11.61 16 16 H 0.42 -13.61 8.32 -39.29 -0.33 -13.94 16 17 C -0.05 1.39 4.93 -3.76 -0.02 1.37 16 18 C 0.04 -0.94 6.96 37.20 0.26 -0.68 16 19 O -0.36 7.84 10.84 -35.23 -0.38 7.46 16 20 C 0.04 -0.94 6.96 37.22 0.26 -0.68 16 21 C -0.05 1.38 4.94 -3.74 -0.02 1.36 16 22 C -0.13 3.55 4.90 -26.73 -0.13 3.42 16 23 C -0.13 2.81 5.39 -26.73 -0.14 2.67 16 24 C -0.01 0.12 7.35 -39.09 -0.29 -0.17 16 25 F -0.13 1.11 16.65 2.25 0.04 1.15 16 26 C -0.04 0.35 9.82 -39.26 -0.39 -0.03 16 27 H 0.38 -4.12 8.70 45.56 0.40 -3.72 16 28 H 0.12 -1.27 7.96 -51.93 -0.41 -1.69 16 29 H -0.25 1.57 7.11 56.52 0.40 1.98 16 30 H -0.26 2.46 7.01 56.52 0.40 2.85 16 31 H 0.17 -2.20 4.84 -52.49 -0.25 -2.45 16 32 H 0.41 -6.36 8.07 -40.82 -0.33 -6.69 16 33 H 0.09 -1.57 8.14 -51.93 -0.42 -2.00 16 34 H 0.07 -1.50 8.14 -51.93 -0.42 -1.92 16 35 H 0.09 -2.38 6.28 -51.93 -0.33 -2.71 16 36 H 0.09 -2.37 8.14 -51.93 -0.42 -2.80 16 37 H 0.14 -4.00 8.14 -51.93 -0.42 -4.42 16 38 H 0.14 -4.38 6.15 -51.93 -0.32 -4.70 16 39 H 0.08 -2.16 8.14 -51.93 -0.42 -2.58 16 40 H 0.14 -3.50 8.14 -51.93 -0.42 -3.92 16 41 H 0.08 -2.15 8.14 -51.93 -0.42 -2.58 16 42 H 0.14 -3.47 8.14 -51.93 -0.42 -3.90 16 43 H 0.14 -4.32 6.15 -51.93 -0.32 -4.64 16 44 H 0.14 -3.97 8.14 -51.93 -0.42 -4.39 16 45 H 0.09 -2.57 6.29 -51.93 -0.33 -2.89 16 46 H 0.09 -2.46 8.14 -51.93 -0.42 -2.89 16 47 H 0.08 -1.77 8.14 -51.93 -0.42 -2.19 16 48 H 0.09 -1.89 8.14 -51.93 -0.42 -2.31 16 49 H 0.15 -1.45 8.06 -52.49 -0.42 -1.88 16 LS Contribution 374.46 15.07 5.64 5.64 Total: 1.00 -34.00 374.46 -11.23 -45.23 By element: Atomic # 1 Polarization: -75.16 SS G_CDS: -7.73 Total: -82.89 kcal Atomic # 6 Polarization: 6.88 SS G_CDS: -2.81 Total: 4.07 kcal Atomic # 7 Polarization: 28.49 SS G_CDS: -0.45 Total: 28.04 kcal Atomic # 8 Polarization: 12.02 SS G_CDS: -0.83 Total: 11.18 kcal Atomic # 9 Polarization: 1.11 SS G_CDS: 0.04 Total: 1.15 kcal Atomic # 14 Polarization: -7.33 SS G_CDS: -5.08 Total: -12.41 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -34.00 -11.23 -45.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16607402_17656566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.851 kcal (2) G-P(sol) polarization free energy of solvation -34.000 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.851 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.229 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.621 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds