Wall clock time and date at job start Mon Mar 8 2021 08:06:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00892 * 109.47244 * 2 1 4 4 C 1.46897 * 109.46980 * 120.00081 * 2 1 3 5 5 C 1.46900 * 109.47200 * 239.99822 * 2 1 3 6 6 C 1.52995 * 109.47166 * 65.00240 * 5 2 1 7 7 H 1.09000 * 112.90608 * 316.25037 * 6 5 2 8 8 C 1.53782 * 113.61618 * 87.50225 * 6 5 2 9 9 C 1.53775 * 87.08146 * 139.98335 * 8 6 5 10 10 H 1.08997 * 113.69266 * 220.01088 * 9 8 6 11 11 N 1.46499 * 113.61628 * 89.11745 * 9 8 6 12 12 C 1.38615 * 120.00055 * 107.50273 * 11 9 8 13 13 N 1.29681 * 124.94756 * 0.02562 * 12 11 9 14 14 C 1.32123 * 116.86476 * 179.97438 * 13 12 11 15 15 C 1.33330 * 114.58096 * 0.02562 * 14 13 12 16 16 C 1.50697 * 125.95409 * 179.97438 * 15 14 13 17 17 O 1.42904 * 109.46844 * 64.99365 * 16 15 14 18 18 Si 1.86296 * 109.47044 * 184.99590 * 16 15 14 19 19 S 1.70962 * 124.94647 * 179.72208 * 12 11 9 20 20 C 1.53778 * 87.08470 * 334.56741 * 9 8 6 21 21 H 1.09004 * 109.47302 * 179.97438 * 1 2 3 22 22 H 1.08998 * 109.47328 * 300.00031 * 1 2 3 23 23 H 1.08996 * 109.46672 * 59.99937 * 1 2 3 24 24 H 1.09006 * 109.47581 * 180.02562 * 4 2 1 25 25 H 1.09007 * 109.46986 * 299.99838 * 4 2 1 26 26 H 1.08996 * 109.47714 * 60.00022 * 4 2 1 27 27 H 1.09002 * 109.47382 * 304.99900 * 5 2 1 28 28 H 1.09003 * 109.47172 * 185.00473 * 5 2 1 29 29 H 1.08998 * 113.61198 * 25.43230 * 8 6 5 30 30 H 1.09000 * 113.61268 * 254.52942 * 8 6 5 31 31 H 0.97004 * 120.00244 * 287.77664 * 11 9 8 32 32 H 1.08001 * 122.71065 * 179.97438 * 14 13 12 33 33 H 1.08996 * 109.47153 * 304.99984 * 16 15 14 34 34 H 0.96704 * 114.00031 * 60.00577 * 17 16 15 35 35 H 1.48490 * 110.00147 * 58.68285 * 18 16 15 36 36 H 1.48505 * 109.99897 * 180.02562 * 18 16 15 37 37 H 1.09000 * 113.61692 * 139.97888 * 20 9 8 38 38 H 1.08998 * 113.61780 * 270.89146 * 20 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9512 0.0000 4 6 1.9586 -0.6925 1.1994 5 6 1.9587 -0.6925 -1.1994 6 6 1.5540 0.0976 -2.4455 7 1 0.5243 0.4528 -2.4067 8 6 2.5665 1.1855 -2.8409 9 6 2.3147 0.7781 -4.3021 10 1 3.2162 0.7642 -4.9145 11 7 1.2102 1.5055 -4.9323 12 6 1.4741 2.4741 -5.8881 13 7 2.6578 2.8121 -6.2959 14 6 2.7247 3.7574 -7.2166 15 6 1.5433 4.2397 -7.6032 16 6 1.3217 5.3181 -8.6323 17 8 1.7547 4.8516 -9.9118 18 14 -0.4907 5.7424 -8.7067 19 16 0.2862 3.3918 -6.7063 20 6 1.9137 -0.6059 -3.7648 21 1 -0.3634 -1.0277 -0.0005 22 1 -0.3634 0.5138 0.8899 23 1 -0.3632 0.5138 -0.8900 24 1 3.0487 -0.6922 1.1997 25 1 1.5953 -0.1786 2.0894 26 1 1.5954 -1.7201 1.1995 27 1 1.5241 -1.6911 -1.2453 28 1 3.0450 -0.7708 -1.1557 29 1 3.5814 0.9821 -2.4995 30 1 2.2345 2.1969 -2.6062 31 1 0.2943 1.3122 -4.6777 32 1 3.6608 4.1115 -7.6226 33 1 1.8917 6.2055 -8.3572 34 1 1.2893 4.0623 -10.2208 35 1 -0.9606 6.1987 -7.3740 36 1 -0.7226 6.8045 -9.7185 37 1 1.0548 -1.0407 -4.2760 38 1 2.7502 -1.2990 -3.6760 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16607414_15704118.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:06:18 Heat of formation + Delta-G solvation = 180.367706 kcal Electronic energy + Delta-G solvation = -18697.779854 eV Core-core repulsion = 15789.424153 eV Total energy + Delta-G solvation = -2908.355701 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.122 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -44.52512 -42.11115 -41.13394 -38.62845 -36.50618 -32.69621 -31.99113 -31.73028 -28.74444 -28.25789 -27.42713 -26.22661 -25.16105 -22.89165 -21.91452 -21.31564 -20.78093 -20.09603 -19.68102 -18.98598 -18.23625 -17.96315 -17.32402 -17.15608 -17.11128 -16.58106 -16.38194 -16.20581 -16.13983 -15.99574 -15.75024 -15.73924 -15.49372 -15.25179 -14.82114 -14.70484 -14.04160 -13.69839 -13.51200 -13.09763 -13.04437 -12.83881 -12.31306 -11.66169 -11.12217 -11.03293 -9.81339 -5.85013 -1.50593 -0.98367 -0.92155 -0.22210 0.45386 0.49758 0.51575 0.68647 0.84990 0.91538 1.08798 1.24915 1.27445 1.32480 1.57528 1.64114 1.70833 1.75820 1.86431 2.05105 2.12008 2.17837 2.20020 2.27240 2.34098 2.62883 2.75911 2.95947 2.98204 3.09637 3.16752 3.24486 3.30147 3.50248 3.73185 3.86814 4.16375 4.71913 4.87491 5.81967 6.00611 Molecular weight = 271.12amu Principal moments of inertia in cm(-1) A = 0.040637 B = 0.003868 C = 0.003691 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 688.856294 B = 7236.990424 C = 7583.410416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.387 5.387 3 H 0.427 0.573 4 C -0.048 4.048 5 C 0.000 4.000 6 C -0.152 4.152 7 H 0.111 0.889 8 C -0.160 4.160 9 C 0.144 3.856 10 H 0.116 0.884 11 N -0.684 5.684 12 C 0.311 3.689 13 N -0.542 5.542 14 C 0.112 3.888 15 C -0.290 4.290 16 C -0.015 4.015 17 O -0.533 6.533 18 Si 0.658 3.342 19 S 0.102 5.898 20 C -0.131 4.131 21 H 0.123 0.877 22 H 0.124 0.876 23 H 0.122 0.878 24 H 0.124 0.876 25 H 0.124 0.876 26 H 0.122 0.878 27 H 0.131 0.869 28 H 0.133 0.867 29 H 0.102 0.898 30 H 0.083 0.917 31 H 0.413 0.587 32 H 0.179 0.821 33 H 0.125 0.875 34 H 0.381 0.619 35 H -0.242 1.242 36 H -0.232 1.232 37 H 0.090 0.910 38 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.227 -14.118 23.683 27.661 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 N 0.038 4.962 3 H 0.262 0.738 4 C -0.190 4.190 5 C -0.121 4.121 6 C -0.170 4.170 7 H 0.129 0.871 8 C -0.199 4.199 9 C 0.035 3.965 10 H 0.134 0.866 11 N -0.324 5.324 12 C -0.059 4.059 13 N -0.266 5.266 14 C -0.038 4.038 15 C -0.413 4.413 16 C -0.129 4.129 17 O -0.339 6.339 18 Si 0.558 3.442 19 S 0.352 5.648 20 C -0.170 4.170 21 H 0.142 0.858 22 H 0.143 0.857 23 H 0.140 0.860 24 H 0.142 0.858 25 H 0.143 0.857 26 H 0.141 0.859 27 H 0.149 0.851 28 H 0.151 0.849 29 H 0.121 0.879 30 H 0.101 0.899 31 H 0.250 0.750 32 H 0.196 0.804 33 H 0.142 0.858 34 H 0.228 0.772 35 H -0.166 1.166 36 H -0.155 1.155 37 H 0.108 0.892 38 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -3.024 -13.527 24.125 27.824 hybrid contribution 1.070 0.539 0.117 1.204 sum -1.954 -12.988 24.242 27.572 Atomic orbital electron populations 1.24178 0.76042 1.09693 1.09458 1.45029 1.16327 1.19129 1.15747 0.73801 1.24149 1.05724 1.02447 0.86657 1.24125 1.05164 0.99892 0.82917 1.23348 1.01701 0.98778 0.93199 0.87082 1.23789 0.99143 0.98677 0.98318 1.21660 0.91604 0.90167 0.93056 0.86627 1.43464 1.08408 1.38969 1.41511 1.23664 0.92944 0.94588 0.94727 1.66438 1.22128 1.19699 1.18321 1.21373 0.98674 0.91639 0.92130 1.25753 0.94424 1.10391 1.10705 1.24192 1.11486 0.95348 0.81868 1.86559 1.65968 1.49507 1.31838 0.95103 0.76546 0.89416 0.83147 1.84082 1.10147 1.33595 1.36990 1.23376 1.03818 0.97181 0.92673 0.85839 0.85706 0.85965 0.85792 0.85723 0.85916 0.85062 0.84898 0.87930 0.89871 0.75009 0.80360 0.85785 0.77159 1.16618 1.15481 0.89186 0.87280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.64 8.98 60.07 0.54 2.18 16 2 N -0.39 12.69 0.66 -251.26 -0.17 12.52 16 3 H 0.43 -14.47 8.44 -39.30 -0.33 -14.80 16 4 C -0.05 1.53 9.19 60.06 0.55 2.08 16 5 C 0.00 -0.01 4.48 -3.83 -0.02 -0.03 16 6 C -0.15 4.05 3.45 -89.81 -0.31 3.74 16 7 H 0.11 -3.08 6.10 -51.93 -0.32 -3.40 16 8 C -0.16 3.64 7.43 -25.92 -0.19 3.45 16 9 C 0.14 -2.68 4.44 -67.12 -0.30 -2.98 16 10 H 0.12 -1.76 7.66 -51.93 -0.40 -2.16 16 11 N -0.68 11.29 5.42 -55.00 -0.30 10.99 16 12 C 0.31 -3.68 8.09 -87.68 -0.71 -4.39 16 13 N -0.54 4.96 9.83 -15.21 -0.15 4.81 16 14 C 0.11 -0.96 11.24 -19.14 -0.22 -1.18 16 15 C -0.29 2.71 5.73 -36.02 -0.21 2.50 16 16 C -0.01 0.13 2.99 36.00 0.11 0.24 16 17 O -0.53 4.22 12.88 -35.23 -0.45 3.76 16 18 Si 0.66 -5.97 31.07 -169.99 -5.28 -11.25 16 19 S 0.10 -1.17 20.59 -107.50 -2.21 -3.38 16 20 C -0.13 2.96 7.39 -25.92 -0.19 2.76 16 21 H 0.12 -3.87 8.11 -51.93 -0.42 -4.29 16 22 H 0.12 -3.94 8.14 -51.93 -0.42 -4.36 16 23 H 0.12 -3.82 6.10 -51.93 -0.32 -4.13 16 24 H 0.12 -3.91 8.11 -51.93 -0.42 -4.33 16 25 H 0.12 -3.94 8.14 -51.93 -0.42 -4.36 16 26 H 0.12 -3.85 8.14 -51.93 -0.42 -4.28 16 27 H 0.13 -4.03 8.09 -51.93 -0.42 -4.45 16 28 H 0.13 -4.08 7.79 -51.93 -0.40 -4.48 16 29 H 0.10 -2.39 7.90 -51.93 -0.41 -2.80 16 30 H 0.08 -1.77 8.14 -51.93 -0.42 -2.19 16 31 H 0.41 -7.86 8.83 -40.82 -0.36 -8.22 16 32 H 0.18 -1.61 8.06 -52.49 -0.42 -2.04 16 33 H 0.13 -1.08 7.96 -51.93 -0.41 -1.49 16 34 H 0.38 -4.40 8.70 45.56 0.40 -4.01 16 35 H -0.24 1.75 7.11 56.52 0.40 2.16 16 36 H -0.23 1.29 7.11 56.52 0.40 1.69 16 37 H 0.09 -1.92 8.14 -51.93 -0.42 -2.35 16 38 H 0.11 -2.48 8.10 -51.93 -0.42 -2.90 16 LS Contribution 318.71 15.07 4.80 4.80 Total: 1.00 -35.88 318.71 -10.67 -46.56 By element: Atomic # 1 Polarization: -71.22 SS G_CDS: -5.97 Total: -77.19 kcal Atomic # 6 Polarization: 9.31 SS G_CDS: -0.94 Total: 8.37 kcal Atomic # 7 Polarization: 28.94 SS G_CDS: -0.61 Total: 28.33 kcal Atomic # 8 Polarization: 4.22 SS G_CDS: -0.45 Total: 3.76 kcal Atomic # 14 Polarization: -5.97 SS G_CDS: -5.28 Total: -11.25 kcal Atomic # 16 Polarization: -1.17 SS G_CDS: -2.21 Total: -3.38 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -35.88 -10.67 -46.56 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16607414_15704118.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 226.923 kcal (2) G-P(sol) polarization free energy of solvation -35.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 191.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.671 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.555 kcal (6) G-S(sol) free energy of system = (1) + (5) 180.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds