Wall clock time and date at job start Mon Mar 8 2021 09:19:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.47084 * 2 1 4 4 C 1.50698 * 109.47021 * 239.99781 * 2 1 3 5 5 C 1.37985 * 120.32526 * 120.00142 * 4 2 1 6 6 N 1.32004 * 120.90338 * 180.02562 * 5 4 2 7 7 C 1.32339 * 121.64689 * 0.02562 * 6 5 4 8 8 N 1.39143 * 119.71975 * 179.97438 * 7 6 5 9 9 C 1.46492 * 120.00234 * 0.02562 * 8 7 6 10 10 H 1.09005 * 109.47048 * 35.00356 * 9 8 7 11 11 C 1.52997 * 109.47580 * 154.99892 * 9 8 7 12 12 C 1.53003 * 109.46816 * 60.00051 * 11 9 8 13 13 C 1.53002 * 109.46928 * 60.00001 * 12 11 9 14 14 H 1.08997 * 109.46879 * 60.00452 * 13 12 11 15 15 N 1.46506 * 109.47134 * 179.97438 * 13 12 11 16 16 O 1.21796 * 119.99914 * 60.00064 * 15 13 12 17 17 O 1.21797 * 119.99849 * 240.00323 * 15 13 12 18 18 C 1.53001 * 109.47488 * 300.00177 * 13 12 11 19 19 C 1.52996 * 109.47511 * 275.00436 * 9 8 7 20 20 C 1.39343 * 120.56201 * 359.97438 * 7 6 5 21 21 F 1.35099 * 120.47259 * 179.97438 * 20 7 6 22 22 C 1.38450 * 119.05684 * 0.02562 * 20 7 6 23 23 H 0.96701 * 113.99824 * 60.00012 * 1 2 3 24 24 H 1.09000 * 109.47285 * 119.99736 * 2 1 3 25 25 H 1.48501 * 110.00235 * 298.67963 * 3 2 1 26 26 H 1.48501 * 110.00165 * 59.99932 * 3 2 1 27 27 H 1.08004 * 119.54739 * 359.74250 * 5 4 2 28 28 H 0.96998 * 119.99530 * 180.02562 * 8 7 6 29 29 H 1.08997 * 109.47767 * 180.02562 * 11 9 8 30 30 H 1.08997 * 109.47235 * 300.00986 * 11 9 8 31 31 H 1.08999 * 109.47736 * 180.02562 * 12 11 9 32 32 H 1.08998 * 109.47398 * 300.00186 * 12 11 9 33 33 H 1.08993 * 109.47183 * 180.02562 * 18 13 12 34 34 H 1.08998 * 109.46808 * 299.99796 * 18 13 12 35 35 H 1.09006 * 109.46879 * 59.99409 * 19 9 8 36 36 H 1.08998 * 109.47408 * 179.97438 * 19 9 8 37 37 H 1.08001 * 120.75911 * 179.97438 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7250 -0.0464 -2.1431 6 7 3.1709 -0.6574 -3.2250 7 6 2.8775 -1.9227 -3.4785 8 7 3.3686 -2.5271 -4.6315 9 6 4.2072 -1.7633 -5.5586 10 1 4.8315 -1.0691 -4.9961 11 6 5.0976 -2.7232 -6.3501 12 6 4.2214 -3.6977 -7.1397 13 6 3.3305 -2.9144 -8.1060 14 1 3.9544 -2.3461 -8.7958 15 7 2.4918 -3.8476 -8.8625 16 8 1.7163 -4.5816 -8.2767 17 8 2.5702 -3.8892 -10.0772 18 6 2.4401 -1.9544 -7.3145 19 6 3.3164 -0.9800 -6.5249 20 6 2.0809 -2.6550 -2.6004 21 9 1.7820 -3.9464 -2.8613 22 6 1.5990 -2.0399 -1.4575 23 1 -0.3933 0.4417 -0.7651 24 1 1.7924 -0.5138 0.8900 25 1 1.5879 2.4585 -1.2242 26 1 1.5615 2.4679 1.2085 27 1 2.9813 0.9888 -1.9723 28 1 3.1558 -3.4542 -4.8214 29 1 5.7219 -2.1549 -7.0396 30 1 5.7322 -3.2813 -5.6617 31 1 4.8556 -4.3820 -7.7033 32 1 3.5974 -4.2661 -6.4500 33 1 1.8052 -1.3967 -8.0028 34 1 1.8162 -2.5227 -6.6248 35 1 2.6821 -0.2960 -5.9609 36 1 3.9404 -0.4113 -7.2144 37 1 0.9789 -2.5813 -0.7584 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16623256_17656566.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:19:06 Heat of formation + Delta-G solvation = -40.382425 kcal Electronic energy + Delta-G solvation = -24727.559306 eV Core-core repulsion = 20810.165392 eV Total energy + Delta-G solvation = -3917.393915 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.116 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -49.93788 -43.34917 -41.63705 -40.26848 -38.14094 -37.38587 -36.00625 -33.40989 -32.75470 -32.51760 -30.74104 -27.40054 -26.53767 -25.03404 -24.42472 -23.33438 -23.11313 -21.09530 -19.80429 -19.63741 -19.35785 -18.59527 -18.26573 -18.25440 -17.65822 -17.15869 -16.80398 -16.37955 -16.21416 -16.07958 -15.61771 -15.44560 -14.85916 -14.76300 -14.39342 -14.22265 -14.11047 -13.89466 -13.79803 -13.42508 -12.91587 -12.76616 -12.66358 -12.46075 -12.37457 -12.11258 -12.09445 -11.97741 -11.70735 -11.42475 -10.87571 -10.73851 -10.62343 -8.91699 -5.08010 -0.43511 -0.16414 0.02284 0.65301 1.14893 1.47547 1.77385 1.86834 2.44772 2.74423 2.82702 2.94633 3.12617 3.23314 3.26452 3.33643 3.47171 3.48706 3.68471 3.72470 3.75059 3.82003 3.87167 4.05612 4.13929 4.35809 4.38281 4.40218 4.50121 4.54160 4.59441 4.61734 4.72611 4.80902 4.88994 5.25769 5.34714 5.78698 6.00575 6.28571 6.61663 6.81201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.062 4.062 3 Si 0.682 3.318 4 C -0.205 4.205 5 C 0.147 3.853 6 N -0.511 5.511 7 C 0.390 3.610 8 N -0.714 5.714 9 C 0.153 3.847 10 H 0.107 0.893 11 C -0.123 4.123 12 C -0.127 4.127 13 C 0.018 3.982 14 H 0.137 0.863 15 N -0.019 5.019 16 O -0.157 6.157 17 O -0.162 6.162 18 C -0.124 4.124 19 C -0.125 4.125 20 C -0.018 4.018 21 F -0.132 7.132 22 C -0.038 4.038 23 H 0.377 0.623 24 H 0.121 0.879 25 H -0.256 1.256 26 H -0.253 1.253 27 H 0.164 0.836 28 H 0.412 0.588 29 H 0.092 0.908 30 H 0.091 0.909 31 H 0.087 0.913 32 H 0.088 0.912 33 H 0.081 0.919 34 H 0.090 0.910 35 H 0.088 0.912 36 H 0.083 0.917 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.194 3.632 2.075 6.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.173 4.173 3 Si 0.583 3.417 4 C -0.210 4.210 5 C -0.010 4.010 6 N -0.228 5.228 7 C 0.152 3.848 8 N -0.349 5.349 9 C 0.048 3.952 10 H 0.125 0.875 11 C -0.162 4.162 12 C -0.165 4.165 13 C -0.079 4.079 14 H 0.155 0.845 15 N 0.504 4.496 16 O -0.378 6.378 17 O -0.381 6.381 18 C -0.162 4.162 19 C -0.164 4.164 20 C -0.044 4.044 21 F -0.111 7.111 22 C -0.064 4.064 23 H 0.224 0.776 24 H 0.139 0.861 25 H -0.181 1.181 26 H -0.178 1.178 27 H 0.181 0.819 28 H 0.250 0.750 29 H 0.110 0.890 30 H 0.110 0.890 31 H 0.106 0.894 32 H 0.107 0.893 33 H 0.100 0.900 34 H 0.109 0.891 35 H 0.107 0.893 36 H 0.101 0.899 37 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 6.158 5.174 2.287 8.361 hybrid contribution -1.961 -1.491 -0.330 2.485 sum 4.196 3.683 1.958 5.917 Atomic orbital electron populations 1.86621 1.17647 1.79903 1.49375 1.24844 0.83946 1.10807 0.97692 0.95167 0.91491 0.74230 0.80827 1.20888 1.04632 0.95095 1.00401 1.22345 0.91738 0.99182 0.87757 1.67290 1.26365 1.07323 1.21825 1.18406 0.90260 0.89150 0.87019 1.44712 1.55040 1.14666 1.20515 1.20987 0.91195 0.93291 0.89721 0.87546 1.21855 0.97522 0.97462 0.99313 1.21898 0.98230 0.98618 0.97779 1.24369 0.94391 0.92007 0.97180 0.84536 1.44918 1.01088 1.01584 1.01982 1.94560 1.33479 1.38619 1.71178 1.94589 1.72755 1.74062 0.96722 1.21876 0.97935 0.96955 0.99414 1.21955 0.98965 0.97440 0.98050 1.18021 1.06584 0.81020 0.98762 1.91510 1.92105 1.33554 1.93924 1.21309 0.96142 0.94277 0.94687 0.77573 0.86143 1.18116 1.17796 0.81946 0.74982 0.88985 0.89042 0.89424 0.89330 0.90044 0.89128 0.89304 0.89885 0.83220 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.08 12.78 -35.23 -0.45 -0.37 16 2 C -0.06 0.12 2.84 36.00 0.10 0.22 16 3 Si 0.68 -1.79 29.82 -169.99 -5.07 -6.86 16 4 C -0.20 0.27 5.40 -104.47 -0.56 -0.29 16 5 C 0.15 -0.22 9.84 -17.57 -0.17 -0.39 16 6 N -0.51 0.19 9.20 -12.36 -0.11 0.08 16 7 C 0.39 -0.07 7.47 -154.86 -1.16 -1.23 16 8 N -0.71 1.43 4.38 -53.86 -0.24 1.20 16 9 C 0.15 -0.55 2.80 -67.94 -0.19 -0.74 16 10 H 0.11 -0.33 7.54 -51.93 -0.39 -0.72 16 11 C -0.12 0.60 5.61 -26.73 -0.15 0.45 16 12 C -0.13 0.43 5.13 -26.73 -0.14 0.29 16 13 C 0.02 -0.04 2.88 -67.93 -0.20 -0.23 16 14 H 0.14 -0.48 8.09 -51.93 -0.42 -0.90 16 15 N -0.02 -0.04 3.82 -4.89 -0.02 -0.06 16 16 O -0.16 -0.63 18.51 -29.46 -0.55 -1.17 16 17 O -0.16 -0.69 19.21 -29.46 -0.57 -1.25 16 18 C -0.12 0.28 5.15 -26.73 -0.14 0.14 16 19 C -0.12 0.44 5.62 -26.73 -0.15 0.29 16 20 C -0.02 -0.01 7.35 -39.09 -0.29 -0.30 16 21 F -0.13 -0.21 16.65 2.25 0.04 -0.17 16 22 C -0.04 0.01 9.75 -39.26 -0.38 -0.37 16 23 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 24 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 25 H -0.26 0.21 7.11 56.52 0.40 0.61 16 26 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 27 H 0.16 -0.59 4.88 -52.48 -0.26 -0.84 16 28 H 0.41 -0.90 6.34 -40.82 -0.26 -1.16 16 29 H 0.09 -0.56 8.14 -51.93 -0.42 -0.98 16 30 H 0.09 -0.46 8.14 -51.93 -0.42 -0.88 16 31 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.09 -0.25 6.39 -51.93 -0.33 -0.58 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.09 -0.08 7.49 -51.93 -0.39 -0.47 16 35 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 37 H 0.15 -0.12 8.06 -52.49 -0.42 -0.55 16 LS Contribution 312.69 15.07 4.71 4.71 Total: 0.00 -6.59 312.69 -9.89 -16.48 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: -4.22 Total: -10.42 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -3.42 Total: -2.16 kcal Atomic # 7 Polarization: 1.58 SS G_CDS: -0.37 Total: 1.21 kcal Atomic # 8 Polarization: -1.23 SS G_CDS: -1.56 Total: -2.79 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.04 Total: -0.17 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: -5.07 Total: -6.86 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -6.59 -9.89 -16.48 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16623256_17656566.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.906 kcal (2) G-P(sol) polarization free energy of solvation -6.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.491 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.476 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds