Wall clock time and date at job start Mon Mar 8 2021 09:09:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86298 * 109.47343 * 2 1 4 4 C 1.50707 * 109.46919 * 119.99812 * 2 1 3 5 5 C 1.33324 * 125.95165 * 64.98550 * 4 2 1 6 6 N 1.32119 * 114.58201 * 180.02562 * 5 4 2 7 7 C 1.29693 * 116.86173 * 359.97438 * 6 5 4 8 8 N 1.38611 * 124.94769 * 180.26352 * 7 6 5 9 9 C 1.46500 * 119.99873 * 359.69758 * 8 7 6 10 10 H 1.08998 * 109.47534 * 34.99625 * 9 8 7 11 11 C 1.53002 * 109.46920 * 154.99911 * 9 8 7 12 12 C 1.53007 * 109.46927 * 179.97438 * 11 9 8 13 13 C 1.53002 * 109.47344 * 300.00204 * 12 11 9 14 14 H 1.08998 * 109.46662 * 300.00039 * 13 12 11 15 15 N 1.46500 * 109.47091 * 179.97438 * 13 12 11 16 16 C 1.46446 * 126.08450 * 299.99925 * 15 13 12 17 17 C 1.53203 * 113.70433 * 178.24527 * 16 15 13 18 18 C 1.55554 * 106.23711 * 27.55053 * 17 16 15 19 19 S 1.67287 * 126.08271 * 119.68891 * 15 13 12 20 20 O 1.42102 * 105.40548 * 274.99838 * 19 15 13 21 21 O 1.42106 * 105.40514 * 45.25513 * 19 15 13 22 22 C 1.53002 * 109.46773 * 59.99829 * 13 12 11 23 23 C 1.52997 * 109.47455 * 299.99811 * 22 13 12 24 24 S 1.70968 * 110.10264 * 359.97438 * 7 6 5 25 25 H 0.96700 * 113.99998 * 300.00285 * 1 2 3 26 26 H 1.09006 * 109.47420 * 239.99505 * 2 1 3 27 27 H 1.48499 * 110.00165 * 178.67996 * 3 2 1 28 28 H 1.48504 * 109.99808 * 299.99884 * 3 2 1 29 29 H 1.08002 * 122.71009 * 0.05368 * 5 4 2 30 30 H 0.97000 * 120.00159 * 179.69565 * 8 7 6 31 31 H 1.08992 * 109.47105 * 300.00052 * 11 9 8 32 32 H 1.09001 * 109.47204 * 60.00314 * 11 9 8 33 33 H 1.09001 * 109.46665 * 60.00299 * 12 11 9 34 34 H 1.08997 * 109.46817 * 180.02562 * 12 11 9 35 35 H 1.08997 * 108.64767 * 299.36038 * 16 15 13 36 36 H 1.09009 * 108.64457 * 57.31360 * 16 15 13 37 37 H 1.08998 * 110.09577 * 146.74577 * 17 16 15 38 38 H 1.08999 * 110.09882 * 268.29492 * 17 16 15 39 39 H 1.08998 * 111.37337 * 80.61658 * 18 17 16 40 40 H 1.09002 * 111.37016 * 205.35733 * 18 17 16 41 41 H 1.08998 * 109.47355 * 60.00634 * 22 13 12 42 42 H 1.09001 * 109.46647 * 180.02562 * 22 13 12 43 43 H 1.09004 * 109.47407 * 300.00272 * 23 22 13 44 44 H 1.09001 * 109.47430 * 180.02562 * 23 22 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.7619 -2.0025 1.5124 6 7 2.2970 -2.3901 2.6565 7 6 2.9107 -1.4845 3.3530 8 7 3.5344 -1.7068 4.5708 9 6 3.5247 -3.0457 5.1651 10 1 3.5839 -3.7944 4.3752 11 6 4.7251 -3.1966 6.1018 12 6 4.7146 -4.5949 6.7231 13 6 3.4210 -4.7909 7.5162 14 1 3.3620 -4.0420 8.3059 15 7 3.4107 -6.1299 8.1104 16 6 3.4754 -7.3980 7.3807 17 6 3.4882 -8.6315 8.2893 18 6 2.7428 -8.2204 9.5913 19 16 3.3304 -6.4823 9.7438 20 8 4.6719 -6.4238 10.2090 21 8 2.3153 -5.6344 10.2635 22 6 2.2207 -4.6400 6.5794 23 6 2.2311 -3.2418 5.9583 24 16 2.8454 0.0216 2.5466 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5139 -0.8900 27 1 3.5346 1.7702 0.0321 28 1 1.5615 2.4678 -1.2085 29 1 1.2306 -2.6778 0.8581 30 1 3.9773 -0.9757 5.0294 31 1 5.6466 -3.0565 5.5369 32 1 4.6658 -2.4480 6.8919 33 1 4.7737 -5.3437 5.9332 34 1 5.5695 -4.7022 7.3907 35 1 2.6129 -7.4627 6.7173 36 1 4.3813 -7.4054 6.7744 37 1 2.9687 -9.4585 7.8053 38 1 4.5148 -8.9172 8.5185 39 1 1.6616 -8.2677 9.4618 40 1 3.0645 -8.8234 10.4404 41 1 2.2797 -5.3889 5.7897 42 1 1.2991 -4.7792 7.1445 43 1 2.1720 -2.4929 6.7480 44 1 1.3758 -3.1341 5.2912 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16729366_15704118.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:09:57 Heat of formation + Delta-G solvation = -40.129704 kcal Electronic energy + Delta-G solvation = -28159.646124 eV Core-core repulsion = 24139.645020 eV Total energy + Delta-G solvation = -4020.001104 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.101 amu Computer time = 3.05 seconds Orbital eigenvalues (eV) -40.96330 -40.12189 -38.38839 -38.03682 -37.64535 -36.89291 -35.91398 -33.39818 -31.95390 -31.29915 -29.38855 -27.51861 -26.44004 -24.71411 -23.89255 -23.68236 -22.90311 -21.03824 -20.65119 -19.92697 -19.58138 -18.41064 -18.15046 -17.94200 -17.13972 -16.96084 -16.68457 -16.29478 -16.22837 -15.82019 -15.70938 -15.59347 -15.28477 -15.05802 -14.87242 -14.75438 -14.57878 -14.20353 -14.01070 -13.82174 -13.50916 -13.31381 -13.10412 -12.97681 -12.91637 -12.83929 -12.63919 -12.45762 -12.33687 -12.30213 -12.12741 -11.99657 -11.76929 -11.59763 -11.36580 -11.05493 -10.76305 -10.21648 -10.13971 -9.98344 -8.73119 -5.13320 -0.84977 -0.00264 0.05353 0.71279 1.27215 1.37137 1.59714 1.91864 2.05636 2.12137 2.53219 2.70173 3.12229 3.39196 3.45263 3.49669 3.57495 3.63709 3.69282 3.80637 3.93145 3.97600 4.01662 4.09134 4.19029 4.25828 4.33535 4.35469 4.38213 4.45705 4.48878 4.62233 4.63441 4.64990 4.68892 4.76843 4.90184 4.97224 5.00404 5.10213 5.15000 5.23045 5.34033 5.53960 5.85461 6.06154 6.53533 7.02813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.010 4.010 3 Si 0.657 3.343 4 C -0.308 4.308 5 C 0.120 3.880 6 N -0.550 5.550 7 C 0.329 3.671 8 N -0.690 5.690 9 C 0.159 3.841 10 H 0.093 0.907 11 C -0.127 4.127 12 C -0.126 4.126 13 C 0.188 3.812 14 H 0.092 0.908 15 N -0.983 5.983 16 C 0.078 3.922 17 C -0.125 4.125 18 C -0.590 4.590 19 S 2.560 3.440 20 O -0.949 6.949 21 O -0.956 6.956 22 C -0.125 4.125 23 C -0.128 4.128 24 S 0.084 5.916 25 H 0.380 0.620 26 H 0.121 0.879 27 H -0.242 1.242 28 H -0.236 1.236 29 H 0.175 0.825 30 H 0.414 0.586 31 H 0.076 0.924 32 H 0.073 0.927 33 H 0.074 0.926 34 H 0.078 0.922 35 H 0.076 0.924 36 H 0.080 0.920 37 H 0.111 0.889 38 H 0.096 0.904 39 H 0.142 0.858 40 H 0.140 0.860 41 H 0.072 0.928 42 H 0.075 0.925 43 H 0.067 0.933 44 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.093 -1.419 0.106 1.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.124 4.124 3 Si 0.557 3.443 4 C -0.431 4.431 5 C -0.031 4.031 6 N -0.275 5.275 7 C -0.041 4.041 8 N -0.328 5.328 9 C 0.052 3.948 10 H 0.111 0.889 11 C -0.166 4.166 12 C -0.166 4.166 13 C 0.083 3.917 14 H 0.110 0.890 15 N -0.824 5.824 16 C -0.049 4.049 17 C -0.164 4.164 18 C -0.721 4.721 19 S 2.657 3.343 20 O -0.938 6.938 21 O -0.945 6.945 22 C -0.165 4.165 23 C -0.168 4.168 24 S 0.333 5.667 25 H 0.227 0.773 26 H 0.138 0.862 27 H -0.166 1.166 28 H -0.160 1.160 29 H 0.192 0.808 30 H 0.251 0.749 31 H 0.095 0.905 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.097 0.903 35 H 0.094 0.906 36 H 0.099 0.901 37 H 0.130 0.870 38 H 0.114 0.886 39 H 0.161 0.839 40 H 0.158 0.842 41 H 0.090 0.910 42 H 0.094 0.906 43 H 0.086 0.914 44 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 1.249 -0.141 0.393 1.317 hybrid contribution -0.409 -1.571 -0.866 1.840 sum 0.841 -1.713 -0.473 1.966 Atomic orbital electron populations 1.86511 1.16965 1.81683 1.49124 1.24103 0.84795 1.08875 0.94647 0.94972 0.81987 0.78007 0.89340 1.25553 1.15188 0.98337 1.03989 1.21319 0.96572 0.93114 0.92134 1.66488 1.18881 1.33497 1.08677 1.23739 0.95305 0.93141 0.91942 1.44173 1.58765 1.12277 1.17613 1.21106 0.94741 0.83472 0.95455 0.88931 1.21816 0.98016 0.97863 0.98926 1.21876 0.98027 0.96526 1.00191 1.20668 0.94969 0.80167 0.95856 0.89035 1.57178 1.90995 1.09332 1.24898 1.21536 1.04384 0.82049 0.96890 1.22414 1.02470 0.98615 0.92902 1.30772 1.11198 1.23743 1.06368 1.06808 0.75624 0.78133 0.73728 1.93666 1.35208 1.85813 1.79133 1.93618 1.59595 1.63430 1.77886 1.21857 0.98406 0.97201 0.99011 1.21935 0.98333 0.96836 0.99681 1.83960 1.55689 1.11622 1.15428 0.77294 0.86156 1.16618 1.15971 0.80840 0.74911 0.90498 0.90859 0.90775 0.90289 0.90565 0.90135 0.87048 0.88559 0.83944 0.84183 0.90963 0.90635 0.91426 0.90627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.13 12.88 -35.23 -0.45 -0.58 16 2 C -0.01 0.00 2.99 36.01 0.11 0.11 16 3 Si 0.66 -0.41 31.07 -169.99 -5.28 -5.69 16 4 C -0.31 -0.18 5.73 -36.02 -0.21 -0.39 16 5 C 0.12 0.20 11.24 -19.14 -0.22 -0.02 16 6 N -0.55 -1.31 9.90 -15.21 -0.15 -1.46 16 7 C 0.33 0.26 8.06 -87.67 -0.71 -0.45 16 8 N -0.69 0.92 5.23 -55.78 -0.29 0.63 16 9 C 0.16 -0.25 2.59 -67.93 -0.18 -0.42 16 10 H 0.09 0.00 7.76 -51.93 -0.40 -0.40 16 11 C -0.13 0.35 5.39 -26.73 -0.14 0.21 16 12 C -0.13 0.27 5.24 -26.73 -0.14 0.13 16 13 C 0.19 -0.22 2.86 -67.93 -0.19 -0.41 16 14 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 15 N -0.98 1.19 3.13 -107.22 -0.34 0.86 16 16 C 0.08 -0.28 6.19 -3.97 -0.02 -0.30 16 17 C -0.12 0.56 6.61 -25.27 -0.17 0.39 16 18 C -0.59 2.12 7.67 38.52 0.30 2.41 16 19 S 2.56 0.96 6.17 -107.50 -0.66 0.30 16 20 O -0.95 -3.67 18.14 -57.37 -1.04 -4.71 16 21 O -0.96 -3.81 18.04 -57.37 -1.03 -4.85 16 22 C -0.12 0.19 5.25 -26.73 -0.14 0.05 16 23 C -0.13 0.16 5.51 -26.73 -0.15 0.01 16 24 S 0.08 -0.02 20.59 -107.50 -2.21 -2.23 16 25 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 26 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 27 H -0.24 -0.40 7.11 56.52 0.40 0.00 16 28 H -0.24 -0.47 7.11 56.52 0.40 -0.07 16 29 H 0.17 0.10 8.06 -52.49 -0.42 -0.32 16 30 H 0.41 -1.38 8.73 -40.82 -0.36 -1.74 16 31 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.07 -0.18 7.59 -51.93 -0.39 -0.58 16 34 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.08 -0.34 7.73 -51.93 -0.40 -0.74 16 36 H 0.08 -0.33 7.60 -51.92 -0.39 -0.72 16 37 H 0.11 -0.67 8.14 -51.93 -0.42 -1.09 16 38 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 39 H 0.14 -0.67 8.14 -51.93 -0.42 -1.09 16 40 H 0.14 -0.68 8.14 -51.93 -0.42 -1.10 16 41 H 0.07 -0.13 7.68 -51.93 -0.40 -0.53 16 42 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 LS Contribution 375.99 15.07 5.67 5.67 Total: 0.00 -10.72 375.99 -14.29 -25.01 By element: Atomic # 1 Polarization: -7.61 SS G_CDS: -6.63 Total: -14.24 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -1.86 Total: 1.31 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -0.78 Total: 0.02 kcal Atomic # 8 Polarization: -7.61 SS G_CDS: -2.53 Total: -10.14 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.28 Total: -5.69 kcal Atomic # 16 Polarization: 0.94 SS G_CDS: -2.88 Total: -1.94 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -10.72 -14.29 -25.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16729366_15704118.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.123 kcal (2) G-P(sol) polarization free energy of solvation -10.716 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.130 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.05 seconds