Wall clock time and date at job start Mon Mar 8 2021 09:51:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34232 * 116.99618 * 2 1 4 4 O 1.20826 * 120.00236 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00079 * 180.02562 * 3 2 1 6 6 H 1.08998 * 109.46862 * 300.00390 * 5 3 2 7 7 C 1.53006 * 109.47239 * 59.99547 * 5 3 2 8 8 C 1.52997 * 109.47164 * 180.02562 * 7 5 3 9 9 C 1.53002 * 109.46978 * 299.99874 * 8 7 5 10 10 F 1.39891 * 109.47254 * 300.00284 * 9 8 7 11 11 C 1.52997 * 109.46978 * 180.02562 * 9 8 7 12 12 N 1.46507 * 109.47321 * 65.00089 * 11 9 8 13 13 C 1.38610 * 120.00312 * 180.02562 * 12 11 9 14 14 N 1.29686 * 124.94629 * 0.02562 * 13 12 11 15 15 C 1.32115 * 116.86342 * 179.97438 * 14 13 12 16 16 C 1.33329 * 114.58444 * 359.97438 * 15 14 13 17 17 C 1.50698 * 125.95791 * 179.97438 * 16 15 14 18 18 O 1.42890 * 109.47449 * 300.00796 * 17 16 15 19 19 Si 1.86298 * 109.47245 * 180.02562 * 17 16 15 20 20 S 1.70965 * 124.94849 * 179.72317 * 13 12 11 21 21 C 1.52996 * 109.46891 * 60.00410 * 9 8 7 22 22 C 1.52997 * 109.47466 * 179.97438 * 5 3 2 23 23 H 1.08998 * 109.47213 * 299.99814 * 1 2 3 24 24 H 1.08996 * 109.46813 * 60.00493 * 1 2 3 25 25 H 1.09002 * 109.46831 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.47002 * 60.00070 * 7 5 3 27 27 H 1.09000 * 109.47050 * 300.00336 * 7 5 3 28 28 H 1.09002 * 109.47045 * 180.02562 * 8 7 5 29 29 H 1.09001 * 109.47375 * 59.99966 * 8 7 5 30 30 H 1.08994 * 109.47445 * 185.00212 * 11 9 8 31 31 H 1.09000 * 109.47459 * 305.00519 * 11 9 8 32 32 H 0.97003 * 119.99307 * 0.02562 * 12 11 9 33 33 H 1.08002 * 122.71264 * 180.02562 * 15 14 13 34 34 H 1.09006 * 109.46601 * 60.00419 * 17 16 15 35 35 H 0.96698 * 114.00396 * 180.02562 * 18 17 16 36 36 H 1.48507 * 109.99581 * 60.00701 * 19 17 16 37 37 H 1.48499 * 110.00142 * 181.31920 * 19 17 16 38 38 H 1.09004 * 109.47368 * 179.97438 * 21 9 8 39 39 H 1.09001 * 109.47372 * 59.99964 * 21 9 8 40 40 H 1.09002 * 109.47153 * 59.99773 * 22 5 3 41 41 H 1.09001 * 109.46832 * 299.99964 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 3.9564 0.7807 0.8891 7 6 4.1130 0.5817 -1.2502 8 6 5.6409 0.6613 -1.2504 9 6 6.0750 2.1284 -1.2501 10 9 5.5748 2.7630 -2.3920 11 6 7.6029 2.2081 -1.2510 12 7 8.1203 1.6510 -2.5034 13 6 9.4867 1.6147 -2.7336 14 7 10.3906 2.0454 -1.9094 15 6 11.6500 1.9319 -2.2920 16 6 11.8170 1.3797 -3.4940 17 6 13.1367 1.1296 -4.1773 18 8 13.8225 2.3702 -4.3573 19 14 12.8364 0.3400 -5.8378 20 16 10.2262 0.9889 -4.1423 21 6 5.5285 2.8217 -0.0006 22 6 4.0001 2.7422 -0.0011 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5137 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 3.7228 1.0759 -2.1399 27 1 3.8039 -0.4636 -1.2502 28 1 6.0303 0.1677 -2.1409 29 1 6.0307 0.1668 -0.3607 30 1 7.9126 3.2492 -1.1612 31 1 7.9970 1.6380 -0.4097 32 1 7.5065 1.3077 -3.1715 33 1 12.4776 2.2593 -1.6801 34 1 13.7437 0.4647 -3.5628 35 1 14.6817 2.2851 -4.7927 36 1 12.0101 1.2373 -6.6848 37 1 14.1313 0.0592 -6.5082 38 1 5.8381 3.8668 0.0000 39 1 5.9183 2.3272 0.8892 40 1 3.6106 3.2366 0.8889 41 1 3.6100 3.2361 -0.8911 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16738320_15704118.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:51:09 Heat of formation + Delta-G solvation = -118.344494 kcal Electronic energy + Delta-G solvation = -26080.201801 eV Core-core repulsion = 22002.930116 eV Total energy + Delta-G solvation = -4077.271684 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.109 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -48.88751 -41.66658 -40.64790 -39.14430 -38.05271 -37.46637 -36.67578 -33.08950 -32.21977 -31.26905 -29.11957 -27.69837 -26.27600 -24.54311 -24.18236 -23.54076 -21.79663 -20.92030 -20.50871 -19.77626 -18.62863 -18.59325 -17.92899 -17.64542 -17.52151 -16.99064 -16.86354 -16.54265 -16.05967 -15.80208 -15.43868 -15.32417 -15.08462 -14.90289 -14.72795 -14.39653 -14.19289 -14.05650 -13.94183 -13.71244 -13.43852 -13.21972 -13.09636 -12.87595 -12.83945 -12.39676 -12.34614 -12.28637 -11.98316 -11.81849 -11.72654 -11.42022 -11.26368 -11.18737 -10.69200 -10.26184 -10.12094 -8.71729 -5.07705 -0.02810 0.08657 0.71790 1.17558 1.23613 1.53475 1.66623 1.91008 2.04535 2.09699 3.06010 3.12881 3.30421 3.34447 3.36429 3.54849 3.65132 3.80865 3.82247 3.97670 3.98656 4.07764 4.15310 4.17375 4.22997 4.33449 4.39806 4.41537 4.49338 4.56541 4.61655 4.71280 4.76453 4.80576 4.85483 4.92037 5.00748 5.08773 5.18414 5.38901 5.76247 5.99142 6.40157 6.72167 7.02785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.359 6.359 3 C 0.464 3.536 4 O -0.503 6.503 5 C -0.081 4.081 6 H 0.113 0.887 7 C -0.113 4.113 8 C -0.137 4.137 9 C 0.109 3.891 10 F -0.199 7.199 11 C 0.117 3.883 12 N -0.691 5.691 13 C 0.324 3.676 14 N -0.549 5.549 15 C 0.118 3.882 16 C -0.260 4.260 17 C -0.018 4.018 18 O -0.534 6.534 19 Si 0.650 3.350 20 S 0.100 5.900 21 C -0.135 4.135 22 C -0.106 4.106 23 H 0.064 0.936 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.077 0.923 27 H 0.086 0.914 28 H 0.082 0.918 29 H 0.091 0.909 30 H 0.081 0.919 31 H 0.088 0.912 32 H 0.417 0.583 33 H 0.176 0.824 34 H 0.084 0.916 35 H 0.381 0.619 36 H -0.239 1.239 37 H -0.241 1.241 38 H 0.088 0.912 39 H 0.090 0.910 40 H 0.082 0.918 41 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.401 -5.935 1.086 6.047 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.390 6.390 5 C -0.100 4.100 6 H 0.131 0.869 7 C -0.151 4.151 8 C -0.175 4.175 9 C 0.090 3.910 10 F -0.179 7.179 11 C -0.009 4.009 12 N -0.332 5.332 13 C -0.047 4.047 14 N -0.275 5.275 15 C -0.033 4.033 16 C -0.383 4.383 17 C -0.131 4.131 18 O -0.342 6.342 19 Si 0.549 3.451 20 S 0.349 5.651 21 C -0.173 4.173 22 C -0.143 4.143 23 H 0.083 0.917 24 H 0.083 0.917 25 H 0.122 0.878 26 H 0.095 0.905 27 H 0.105 0.895 28 H 0.100 0.900 29 H 0.110 0.890 30 H 0.099 0.901 31 H 0.107 0.893 32 H 0.255 0.745 33 H 0.193 0.807 34 H 0.102 0.898 35 H 0.229 0.771 36 H -0.163 1.163 37 H -0.165 1.165 38 H 0.106 0.894 39 H 0.109 0.891 40 H 0.101 0.899 41 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.880 -5.484 0.218 5.558 hybrid contribution 1.130 1.024 0.276 1.550 sum 0.250 -4.459 0.494 4.494 Atomic orbital electron populations 1.23319 0.75910 1.03993 1.02739 1.86500 1.23745 1.33324 1.83935 1.23728 0.91932 0.81449 0.72274 1.90699 1.67144 1.36379 1.44732 1.21151 0.87244 0.99488 1.02071 0.86906 1.21525 0.94907 1.01952 0.96687 1.22153 0.96254 0.94347 1.04739 1.21264 0.92317 0.93285 0.84089 1.92886 1.88878 1.83743 1.52441 1.21965 0.91045 1.00943 0.86959 1.43795 1.00425 1.67707 1.21296 1.23633 0.90165 0.96787 0.94103 1.66476 1.00211 1.27654 1.33117 1.21281 0.92572 0.95899 0.93520 1.24331 0.96126 1.17618 1.00178 1.23702 0.90592 0.90162 1.08632 1.86613 1.36279 1.29477 1.81817 0.95284 0.85702 0.87360 0.76748 1.83953 0.99393 1.61987 1.19724 1.22082 0.96006 1.02562 0.96660 1.21435 0.94444 0.93552 1.04897 0.91750 0.91745 0.87835 0.90469 0.89494 0.89985 0.89016 0.90065 0.89346 0.74528 0.80748 0.89788 0.77072 1.16277 1.16464 0.89364 0.89140 0.89906 0.90009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.31 10.47 -39.26 -0.41 -0.72 16 3 C 0.46 0.68 7.26 36.00 0.26 0.94 16 4 O -0.50 -2.33 15.73 -18.75 -0.29 -2.62 16 5 C -0.08 0.13 2.63 -91.77 -0.24 -0.11 16 6 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 7 C -0.11 0.28 5.01 -26.73 -0.13 0.14 16 8 C -0.14 0.48 4.87 -26.73 -0.13 0.35 16 9 C 0.11 -0.24 0.84 -90.62 -0.08 -0.32 16 10 F -0.20 -0.10 15.41 2.25 0.03 -0.07 16 11 C 0.12 -0.16 5.12 -4.04 -0.02 -0.19 16 12 N -0.69 0.36 5.33 -62.30 -0.33 0.02 16 13 C 0.32 0.55 8.09 -87.68 -0.71 -0.16 16 14 N -0.55 -1.83 10.14 -15.21 -0.15 -1.98 16 15 C 0.12 0.31 11.22 -19.14 -0.21 0.10 16 16 C -0.26 -0.47 5.78 -36.02 -0.21 -0.67 16 17 C -0.02 0.00 2.98 36.00 0.11 0.11 16 18 O -0.53 -0.62 12.84 -35.23 -0.45 -1.07 16 19 Si 0.65 -0.33 31.05 -169.99 -5.28 -5.61 16 20 S 0.10 0.08 20.57 -107.50 -2.21 -2.13 16 21 C -0.13 0.37 5.00 -26.71 -0.13 0.24 16 22 C -0.11 0.12 4.37 -26.71 -0.12 0.00 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 24 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 25 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 26 H 0.08 -0.08 7.80 -51.93 -0.41 -0.49 16 27 H 0.09 -0.25 8.11 -51.93 -0.42 -0.68 16 28 H 0.08 -0.32 7.18 -51.93 -0.37 -0.69 16 29 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 30 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.42 -0.82 7.58 -40.82 -0.31 -1.13 16 33 H 0.18 0.22 8.06 -52.49 -0.42 -0.20 16 34 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 35 H 0.38 -1.16 8.74 45.56 0.40 -0.76 16 36 H -0.24 -0.65 7.11 56.52 0.40 -0.25 16 37 H -0.24 -0.19 7.11 56.52 0.40 0.21 16 38 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 39 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 40 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 41 H 0.08 0.07 7.76 -51.93 -0.40 -0.34 16 LS Contribution 354.05 15.07 5.34 5.34 Total: 0.00 -8.51 354.05 -10.09 -18.60 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -5.77 Total: -11.23 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -0.55 Total: 1.47 kcal Atomic # 7 Polarization: -1.47 SS G_CDS: -0.49 Total: -1.96 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -1.16 Total: -4.41 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.03 Total: -0.07 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.28 Total: -5.61 kcal Atomic # 16 Polarization: 0.08 SS G_CDS: -2.21 Total: -2.13 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -8.51 -10.09 -18.60 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16738320_15704118.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.744 kcal (2) G-P(sol) polarization free energy of solvation -8.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds