Wall clock time and date at job start Mon Mar 8 2021 05:58:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.33326 * 125.95315 * 2 1 4 4 C 1.50696 * 122.70910 * 0.02562 * 3 2 1 5 5 O 1.42905 * 109.47020 * 113.53920 * 4 3 2 6 6 Si 1.86294 * 109.47376 * 233.53603 * 4 3 2 7 7 N 1.32121 * 114.57597 * 180.27226 * 3 2 1 8 8 C 1.29685 * 116.87007 * 359.53382 * 7 3 2 9 9 N 1.38605 * 124.94952 * 180.21029 * 8 7 3 10 10 C 1.46507 * 119.99837 * 180.30097 * 9 8 7 11 11 H 1.09001 * 109.46739 * 34.99956 * 10 9 8 12 12 C 1.52997 * 109.46948 * 154.99602 * 10 9 8 13 13 C 1.53000 * 109.47047 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.47123 * 299.99746 * 13 12 10 15 15 H 1.09000 * 109.47112 * 300.00393 * 14 13 12 16 16 C 1.53000 * 109.47123 * 179.97438 * 14 13 12 17 17 F 1.39895 * 109.47267 * 65.00155 * 16 14 13 18 18 C 1.53010 * 109.46743 * 60.00136 * 14 13 12 19 19 C 1.52991 * 109.47011 * 274.99839 * 10 9 8 20 20 S 1.70961 * 110.09830 * 0.44730 * 8 7 3 21 21 H 1.08994 * 109.47739 * 84.87216 * 1 2 3 22 22 H 1.09007 * 109.47261 * 204.88100 * 1 2 3 23 23 H 1.09004 * 109.46752 * 324.87193 * 1 2 3 24 24 H 1.09005 * 109.47050 * 353.53960 * 4 3 2 25 25 H 0.96697 * 114.00151 * 59.99946 * 5 4 3 26 26 H 1.48492 * 110.00345 * 179.97438 * 6 4 3 27 27 H 1.48500 * 110.00299 * 301.32448 * 6 4 3 28 28 H 0.97000 * 119.99924 * 0.29623 * 9 8 7 29 29 H 1.09006 * 109.47132 * 300.00029 * 12 10 9 30 30 H 1.09000 * 109.47051 * 59.99800 * 12 10 9 31 31 H 1.08997 * 109.46959 * 59.99804 * 13 12 10 32 32 H 1.09007 * 109.46821 * 180.02562 * 13 12 10 33 33 H 1.08999 * 109.46671 * 185.00577 * 16 14 13 34 34 H 1.09003 * 109.46943 * 304.99829 * 16 14 13 35 35 H 1.09004 * 109.46816 * 59.99857 * 18 14 13 36 36 H 1.08996 * 109.46897 * 179.97438 * 18 14 13 37 37 H 1.09001 * 109.47465 * 299.99672 * 19 10 9 38 38 H 1.08999 * 109.47602 * 59.99985 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4829 0.0006 5 8 2.0698 3.1221 1.2358 6 14 2.4872 3.4416 -1.4120 7 7 3.5850 0.8186 -0.0057 8 6 3.9314 -0.4311 -0.0011 9 7 5.2384 -0.8927 -0.0017 10 6 5.5064 -2.3330 -0.0028 11 1 4.7452 -2.8438 -0.5925 12 6 6.8849 -2.5947 -0.6129 13 6 7.1646 -4.0989 -0.6147 14 6 7.1345 -4.6250 0.8217 15 1 7.8958 -4.1145 1.4116 16 6 7.4136 -6.1293 0.8199 17 9 8.7171 -6.3612 0.3681 18 6 5.7559 -4.3632 1.4319 19 6 5.4764 -2.8585 1.4338 20 16 2.5412 -1.4261 -0.0009 21 1 -0.3634 0.0918 -1.0235 22 1 -0.3634 -0.9323 0.4324 23 1 -0.3633 0.8405 0.5914 24 1 0.6580 2.4498 -0.1147 25 1 3.0196 3.1867 1.4049 26 1 1.9541 4.8275 -1.4228 27 1 3.9665 3.4669 -1.2837 28 1 5.9754 -0.2622 -0.0014 29 1 6.9062 -2.2204 -1.6365 30 1 7.6461 -2.0839 -0.0233 31 1 6.4033 -4.6093 -1.2046 32 1 8.1469 -4.2853 -1.0490 33 1 7.3046 -6.5202 1.8316 34 1 6.7055 -6.6294 0.1590 35 1 4.9946 -4.8737 0.8419 36 1 5.7343 -4.7384 2.4550 37 1 6.2377 -2.3477 2.0235 38 1 4.4944 -2.6720 1.8685 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16769144_15704122.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:58:54 Heat of formation + Delta-G solvation = -54.850235 kcal Electronic energy + Delta-G solvation = -20813.703340 eV Core-core repulsion = 17504.775498 eV Total energy + Delta-G solvation = -3308.927842 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 287.110 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -48.58840 -41.06010 -40.21733 -37.66054 -36.40733 -33.52300 -32.08642 -31.52717 -28.91158 -26.69082 -25.57184 -24.46482 -23.84478 -22.59351 -21.42289 -20.31366 -19.11175 -17.94766 -17.49480 -17.21685 -16.85958 -16.77022 -16.34623 -16.22920 -15.70629 -15.45842 -15.20661 -15.11898 -14.57008 -14.18052 -14.13174 -13.81229 -13.64415 -13.54943 -13.45301 -13.32223 -12.81878 -12.71924 -12.39770 -12.30010 -12.06664 -11.73597 -11.68040 -11.53286 -11.49666 -11.01580 -10.61879 -10.38671 -9.96802 -8.61972 -4.84364 0.03899 0.20078 0.80141 1.36137 1.83046 1.85945 1.90894 2.21541 3.28159 3.31793 3.35519 3.43939 3.66821 3.68448 3.76369 3.97516 4.00038 4.06594 4.08274 4.20077 4.22795 4.22982 4.27386 4.48857 4.54009 4.56153 4.63495 4.66281 4.78048 4.84603 4.90326 4.92327 4.94449 4.96019 5.07679 5.18968 5.24774 5.60437 6.28024 6.46872 6.96604 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 C -0.244 4.244 3 C 0.075 3.925 4 C -0.036 4.036 5 O -0.526 6.526 6 Si 0.698 3.302 7 N -0.550 5.550 8 C 0.321 3.679 9 N -0.692 5.692 10 C 0.152 3.848 11 H 0.083 0.917 12 C -0.123 4.123 13 C -0.112 4.112 14 C -0.124 4.124 15 H 0.085 0.915 16 C 0.064 3.936 17 F -0.217 7.217 18 C -0.111 4.111 19 C -0.136 4.136 20 S 0.103 5.897 21 H 0.076 0.924 22 H 0.068 0.932 23 H 0.079 0.921 24 H 0.122 0.878 25 H 0.380 0.620 26 H -0.257 1.257 27 H -0.252 1.252 28 H 0.411 0.589 29 H 0.076 0.924 30 H 0.074 0.926 31 H 0.070 0.930 32 H 0.077 0.923 33 H 0.076 0.924 34 H 0.076 0.924 35 H 0.071 0.929 36 H 0.074 0.926 37 H 0.072 0.928 38 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.177 -3.943 -1.515 4.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.367 4.367 3 C -0.055 4.055 4 C -0.149 4.149 5 O -0.332 6.332 6 Si 0.597 3.403 7 N -0.276 5.276 8 C -0.050 4.050 9 N -0.332 5.332 10 C 0.047 3.953 11 H 0.101 0.899 12 C -0.162 4.162 13 C -0.150 4.150 14 C -0.143 4.143 15 H 0.103 0.897 16 C 0.009 3.991 17 F -0.198 7.198 18 C -0.149 4.149 19 C -0.175 4.175 20 S 0.352 5.648 21 H 0.095 0.905 22 H 0.087 0.913 23 H 0.098 0.902 24 H 0.139 0.861 25 H 0.228 0.772 26 H -0.182 1.182 27 H -0.176 1.176 28 H 0.249 0.751 29 H 0.095 0.905 30 H 0.092 0.908 31 H 0.089 0.911 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.089 0.911 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -1.021 -4.089 -1.728 4.555 hybrid contribution 0.795 1.048 1.139 1.740 sum -0.225 -3.040 -0.589 3.105 Atomic orbital electron populations 1.20198 0.86800 1.03229 1.02917 1.25096 1.01102 0.93097 1.17424 1.19980 0.86816 0.97054 1.01676 1.24626 1.04485 0.89930 0.95808 1.86565 1.29639 1.79848 1.37171 0.94765 0.81205 0.79906 0.84442 1.66053 1.17372 1.16816 1.27321 1.23278 0.91848 0.91496 0.98414 1.44075 1.01766 1.07004 1.80307 1.21196 0.98545 0.78755 0.96842 0.89896 1.21757 0.95225 0.97314 1.01856 1.21540 1.03153 0.94400 0.95914 1.21852 0.98950 0.95504 0.97952 0.89659 1.22062 0.79845 0.96355 1.00840 1.92779 1.40103 1.95703 1.91229 1.21481 0.95954 0.95726 1.01729 1.22051 1.03040 0.95910 0.96498 1.83913 0.96513 1.10327 1.74088 0.90494 0.91340 0.90244 0.86054 0.77211 1.18182 1.17567 0.75067 0.90535 0.90780 0.91147 0.90388 0.90603 0.90603 0.91059 0.90767 0.90905 0.91073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.07 9.71 36.00 0.35 0.42 16 2 C -0.24 -0.35 6.57 -36.03 -0.24 -0.59 16 3 C 0.08 0.19 5.20 -84.19 -0.44 -0.25 16 4 C -0.04 -0.06 2.84 36.00 0.10 0.04 16 5 O -0.53 -1.73 12.88 -35.23 -0.45 -2.19 16 6 Si 0.70 0.85 32.61 -169.99 -5.54 -4.70 16 7 N -0.55 -1.81 9.76 -11.37 -0.11 -1.92 16 8 C 0.32 0.55 8.22 -87.69 -0.72 -0.17 16 9 N -0.69 0.35 5.23 -55.79 -0.29 0.06 16 10 C 0.15 -0.34 2.40 -67.93 -0.16 -0.50 16 11 H 0.08 -0.17 7.26 -51.93 -0.38 -0.55 16 12 C -0.12 0.36 5.39 -26.73 -0.14 0.22 16 13 C -0.11 0.32 5.12 -26.73 -0.14 0.18 16 14 C -0.12 0.36 2.49 -90.61 -0.23 0.13 16 15 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 16 C 0.06 -0.14 6.91 37.16 0.26 0.11 16 17 F -0.22 -0.29 17.04 2.25 0.04 -0.25 16 18 C -0.11 0.38 5.20 -26.70 -0.14 0.24 16 19 C -0.14 0.32 5.51 -26.71 -0.15 0.18 16 20 S 0.10 0.06 21.68 -107.50 -2.33 -2.27 16 21 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 22 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 23 H 0.08 -0.09 7.17 -51.93 -0.37 -0.46 16 24 H 0.12 -0.01 6.33 -51.93 -0.33 -0.34 16 25 H 0.38 0.61 8.70 45.56 0.40 1.00 16 26 H -0.26 -0.91 7.11 56.52 0.40 -0.51 16 27 H -0.25 -1.10 7.11 56.52 0.40 -0.69 16 28 H 0.41 -0.39 8.73 -40.82 -0.36 -0.74 16 29 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 32 H 0.08 -0.15 7.94 -51.93 -0.41 -0.56 16 33 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 34 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 36 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 37 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 38 H 0.07 -0.10 8.04 -51.93 -0.42 -0.52 16 LS Contribution 322.69 15.07 4.86 4.86 Total: 0.00 -5.55 322.69 -11.19 -16.74 By element: Atomic # 1 Polarization: -4.62 SS G_CDS: -5.72 Total: -10.34 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -1.64 Total: 0.01 kcal Atomic # 7 Polarization: -1.46 SS G_CDS: -0.40 Total: -1.86 kcal Atomic # 8 Polarization: -1.73 SS G_CDS: -0.45 Total: -2.19 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: 0.85 SS G_CDS: -5.54 Total: -4.70 kcal Atomic # 16 Polarization: 0.06 SS G_CDS: -2.33 Total: -2.27 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -5.55 -11.19 -16.74 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16769144_15704122.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.112 kcal (2) G-P(sol) polarization free energy of solvation -5.551 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.738 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.850 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds