Wall clock time and date at job start Mon Mar 8 2021 06:57:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86305 * 109.47231 * 2 1 4 4 C 1.50694 * 109.47084 * 119.99923 * 2 1 3 5 5 C 1.38603 * 120.72052 * 65.00038 * 4 2 1 6 6 N 1.32280 * 119.19802 * 180.02562 * 5 4 2 7 7 C 1.32487 * 120.73981 * 359.97438 * 6 5 4 8 8 N 1.38409 * 119.21845 * 179.97438 * 7 6 5 9 9 C 1.46494 * 120.00508 * 179.97438 * 8 7 6 10 10 C 1.52999 * 109.47391 * 180.02562 * 9 8 7 11 11 H 1.08993 * 112.90825 * 316.25137 * 10 9 8 12 12 C 1.53962 * 113.66529 * 87.55384 * 10 9 8 13 13 C 1.53782 * 87.11063 * 139.88900 * 12 10 9 14 14 H 1.09001 * 113.61250 * 220.08565 * 13 12 10 15 15 N 1.46496 * 113.68971 * 89.19569 * 13 12 10 16 16 C 1.34426 * 126.82405 * 347.47108 * 15 13 12 17 17 N 1.30837 * 108.08081 * 179.97438 * 16 15 13 18 18 C 1.33237 * 109.82454 * 359.97438 * 17 16 15 19 19 N 1.30716 * 108.94967 * 359.76005 * 18 17 16 20 20 C 1.53781 * 87.08260 * 334.63747 * 13 12 10 21 21 N 1.32493 * 121.56733 * 0.27592 * 7 6 5 22 22 C 1.32272 * 120.73819 * 359.44315 * 21 7 6 23 23 H 0.96703 * 113.99814 * 300.00281 * 1 2 3 24 24 H 1.08996 * 109.47225 * 240.00038 * 2 1 3 25 25 H 1.48505 * 109.99885 * 300.00073 * 3 2 1 26 26 H 1.48501 * 109.99634 * 61.31694 * 3 2 1 27 27 H 1.08004 * 120.40149 * 0.04319 * 5 4 2 28 28 H 0.97000 * 119.99812 * 0.02562 * 8 7 6 29 29 H 1.09002 * 109.47287 * 59.99955 * 9 8 7 30 30 H 1.09004 * 109.47020 * 300.00236 * 9 8 7 31 31 H 1.08997 * 113.53543 * 25.33574 * 12 10 9 32 32 H 1.08998 * 113.73879 * 254.47172 * 12 10 9 33 33 H 1.08000 * 125.96416 * 359.97438 * 16 15 13 34 34 H 1.08006 * 125.53032 * 179.97438 * 18 17 16 35 35 H 1.09002 * 113.61445 * 139.98212 * 20 13 12 36 36 H 1.09002 * 113.61408 * 270.79943 * 20 13 12 37 37 H 1.08000 * 120.40224 * 180.30006 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6926 -2.0633 1.4140 6 7 2.1469 -2.6565 2.5056 7 6 2.8232 -1.9723 3.4165 8 7 3.2837 -2.6245 4.5471 9 6 4.0338 -1.8848 5.5651 10 6 4.4231 -2.8329 6.7011 11 1 3.6093 -3.4933 7.0002 12 6 5.7567 -3.5652 6.4653 13 6 6.0541 -3.3412 7.9574 14 1 7.0915 -3.0756 8.1607 15 7 5.5615 -4.4152 8.8233 16 6 4.7106 -5.3986 8.4828 17 7 4.5211 -6.1539 9.5342 18 6 5.2314 -5.6867 10.5601 19 7 5.8897 -4.6260 10.1726 20 6 5.1110 -2.1288 7.8826 21 7 3.0642 -0.6773 3.2738 22 6 2.6426 -0.0252 2.2030 23 1 -0.3933 0.4418 0.7651 24 1 1.7924 -0.5138 -0.8899 25 1 1.5615 2.4679 -1.2085 26 1 1.5879 2.4585 1.2242 27 1 1.1425 -2.6265 0.6746 28 1 3.1103 -3.5715 4.6651 29 1 3.4140 -1.0796 5.9597 30 1 4.9348 -1.4642 5.1185 31 1 6.4349 -3.0309 5.7999 32 1 5.6394 -4.6148 6.1962 33 1 4.2617 -5.5405 7.5108 34 1 5.2615 -6.1169 11.5503 35 1 4.4710 -2.0189 8.7581 36 1 5.6130 -1.2016 7.6062 37 1 2.8462 1.0294 2.0899 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945870_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:57:33 Heat of formation + Delta-G solvation = 158.666354 kcal Electronic energy + Delta-G solvation = -21846.420441 eV Core-core repulsion = 18436.208656 eV Total energy + Delta-G solvation = -3410.211785 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.128 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -43.23617 -42.12267 -40.55935 -38.32532 -36.76350 -34.74593 -33.64032 -32.51721 -32.04672 -29.18460 -27.26595 -26.52108 -25.99911 -24.82876 -23.17817 -23.06942 -22.45019 -20.94348 -19.46710 -18.78460 -18.23319 -18.04678 -17.05953 -16.83930 -16.51035 -16.26186 -16.12979 -16.03160 -15.85148 -15.47721 -15.28615 -14.88228 -14.62182 -14.24153 -14.01663 -13.83802 -13.50015 -13.21210 -13.00690 -12.41249 -12.28123 -12.08047 -11.89886 -11.84715 -11.77016 -11.36575 -10.99056 -10.78632 -10.76814 -10.64656 -10.07264 -9.18868 -5.06992 0.01559 0.11778 0.59847 1.16244 1.17605 1.47648 1.70085 1.87753 2.00120 2.77533 2.84240 2.98300 3.07578 3.25156 3.28669 3.30910 3.39516 3.57269 3.66378 3.74495 3.77610 3.89296 3.99988 4.13473 4.14427 4.28706 4.36536 4.40000 4.49906 4.52458 4.60930 4.68736 4.69796 4.87244 5.14729 5.26793 5.43984 5.69047 5.78294 5.92969 6.30256 6.31849 7.09565 7.23394 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.053 4.053 3 Si 0.680 3.320 4 C -0.291 4.291 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.566 3.434 8 N -0.696 5.696 9 C 0.149 3.851 10 C -0.131 4.131 11 H 0.100 0.900 12 C -0.137 4.137 13 C 0.128 3.872 14 H 0.117 0.883 15 N -0.363 5.363 16 C 0.253 3.747 17 N -0.544 5.544 18 C 0.199 3.801 19 N -0.316 5.316 20 C -0.131 4.131 21 N -0.563 5.563 22 C 0.198 3.802 23 H 0.376 0.624 24 H 0.120 0.880 25 H -0.253 1.253 26 H -0.258 1.258 27 H 0.171 0.829 28 H 0.415 0.585 29 H 0.073 0.927 30 H 0.075 0.925 31 H 0.114 0.886 32 H 0.083 0.917 33 H 0.215 0.785 34 H 0.219 0.781 35 H 0.082 0.918 36 H 0.110 0.890 37 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.658 2.442 -2.296 4.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.165 4.165 3 Si 0.580 3.420 4 C -0.300 4.300 5 C 0.056 3.944 6 N -0.290 5.290 7 C 0.210 3.790 8 N -0.333 5.333 9 C 0.025 3.975 10 C -0.150 4.150 11 H 0.118 0.882 12 C -0.175 4.175 13 C 0.025 3.975 14 H 0.135 0.865 15 N -0.154 5.154 16 C -0.044 4.044 17 N -0.271 5.271 18 C -0.104 4.104 19 N -0.142 5.142 20 C -0.170 4.170 21 N -0.285 5.285 22 C 0.030 3.970 23 H 0.223 0.777 24 H 0.138 0.862 25 H -0.178 1.178 26 H -0.183 1.183 27 H 0.188 0.812 28 H 0.252 0.748 29 H 0.091 0.909 30 H 0.094 0.906 31 H 0.132 0.868 32 H 0.101 0.899 33 H 0.231 0.769 34 H 0.235 0.765 35 H 0.101 0.899 36 H 0.129 0.871 37 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 3.293 2.773 -1.388 4.523 hybrid contribution -1.539 -0.110 -0.357 1.584 sum 1.754 2.663 -1.745 3.635 Atomic orbital electron populations 1.86619 1.17747 1.79855 1.49340 1.24675 0.83773 1.10568 0.97452 0.95203 0.91458 0.74546 0.80743 1.21654 1.09024 0.97733 1.01550 1.22855 0.89082 0.90979 0.91521 1.67984 1.16520 1.40071 1.04457 1.19381 0.87164 0.85540 0.86955 1.44106 1.58896 1.12168 1.18112 1.21306 0.96231 0.93701 0.86299 1.23026 0.97471 0.98557 0.95934 0.88204 1.23580 0.97566 1.02693 0.93677 1.22178 0.99785 0.86307 0.89263 0.86463 1.50246 1.34321 1.22258 1.08542 1.25978 0.92082 0.86165 1.00189 1.70612 1.26935 1.30180 0.99323 1.26115 0.92655 0.91618 0.99967 1.78113 1.24593 1.20647 0.90881 1.23349 0.97969 0.97400 0.98309 1.67931 1.27242 1.08206 1.25129 1.22842 0.88129 0.99458 0.86551 0.77654 0.86187 1.17750 1.18257 0.81235 0.74786 0.90908 0.90647 0.86751 0.89852 0.76889 0.76456 0.89946 0.87124 0.81652 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.11 12.85 -35.23 -0.45 -0.35 16 2 C -0.05 0.10 2.83 36.00 0.10 0.20 16 3 Si 0.68 -1.64 29.95 -169.99 -5.09 -6.73 16 4 C -0.29 0.25 5.36 -104.35 -0.56 -0.31 16 5 C 0.22 0.05 10.99 -17.22 -0.19 -0.14 16 6 N -0.57 -1.00 10.46 -13.93 -0.15 -1.15 16 7 C 0.57 0.71 8.43 -322.81 -2.72 -2.01 16 8 N -0.70 0.99 5.70 -62.31 -0.36 0.64 16 9 C 0.15 -0.47 5.49 -4.05 -0.02 -0.49 16 10 C -0.13 0.60 3.36 -89.71 -0.30 0.30 16 11 H 0.10 -0.43 7.04 -51.93 -0.37 -0.80 16 12 C -0.14 0.69 6.90 -25.82 -0.18 0.51 16 13 C 0.13 -0.36 5.21 -67.12 -0.35 -0.71 16 14 H 0.12 -0.34 8.14 -51.93 -0.42 -0.77 16 15 N -0.36 -0.10 3.81 -55.32 -0.21 -0.31 16 16 C 0.25 0.01 10.83 -90.65 -0.98 -0.97 16 17 N -0.54 -1.55 11.19 -15.83 -0.18 -1.73 16 18 C 0.20 0.45 13.03 -91.81 -1.20 -0.75 16 19 N -0.32 -0.94 12.70 29.29 0.37 -0.56 16 20 C -0.13 0.50 7.43 -25.92 -0.19 0.31 16 21 N -0.56 -0.65 9.59 -13.93 -0.13 -0.79 16 22 C 0.20 -0.10 9.92 -17.23 -0.17 -0.27 16 23 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 24 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 25 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 26 H -0.26 0.15 7.02 56.52 0.40 0.55 16 27 H 0.17 -0.25 8.06 -52.48 -0.42 -0.67 16 28 H 0.41 -1.07 8.59 -40.82 -0.35 -1.43 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 30 H 0.08 -0.23 7.84 -51.93 -0.41 -0.64 16 31 H 0.11 -0.66 7.90 -51.93 -0.41 -1.07 16 32 H 0.08 -0.43 7.04 -51.93 -0.37 -0.80 16 33 H 0.21 -0.82 6.77 -52.49 -0.36 -1.18 16 34 H 0.22 -0.21 8.06 -52.48 -0.42 -0.64 16 35 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 36 H 0.11 -0.57 8.10 -51.93 -0.42 -0.99 16 37 H 0.17 -0.45 5.01 -52.49 -0.26 -0.71 16 LS Contribution 315.65 15.07 4.76 4.76 Total: 0.00 -9.65 315.65 -12.47 -22.12 By element: Atomic # 1 Polarization: -7.28 SS G_CDS: -4.27 Total: -11.55 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -6.76 Total: -4.33 kcal Atomic # 7 Polarization: -3.26 SS G_CDS: -0.65 Total: -3.91 kcal Atomic # 8 Polarization: 0.11 SS G_CDS: -0.45 Total: -0.35 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.09 Total: -6.73 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -9.65 -12.47 -22.12 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945870_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 180.785 kcal (2) G-P(sol) polarization free energy of solvation -9.650 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 171.135 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.468 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.119 kcal (6) G-S(sol) free energy of system = (1) + (5) 158.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds