Wall clock time and date at job start Mon Mar 8 2021 06:57:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.33326 * 125.95299 * 2 1 4 4 C 1.50705 * 122.70728 * 359.96306 * 3 2 1 5 5 O 1.42894 * 109.47171 * 329.73673 * 4 3 2 6 6 Si 1.86298 * 109.46780 * 209.73114 * 4 3 2 7 7 N 1.32115 * 114.58077 * 179.69517 * 3 2 1 8 8 C 1.29689 * 116.86612 * 0.27409 * 7 3 2 9 9 N 1.38603 * 124.95320 * 180.02562 * 8 7 3 10 10 C 1.46496 * 120.00361 * 179.97438 * 9 8 7 11 11 C 1.53004 * 109.47479 * 179.97438 * 10 9 8 12 12 H 1.08995 * 112.84882 * 43.79906 * 11 10 9 13 13 C 1.53780 * 113.61770 * 175.00010 * 11 10 9 14 14 C 1.53774 * 87.08341 * 139.97737 * 13 11 10 15 15 H 1.08997 * 113.61951 * 219.93543 * 14 13 11 16 16 N 1.46503 * 113.61594 * 89.11392 * 14 13 11 17 17 C 1.34428 * 126.82290 * 275.00180 * 16 14 13 18 18 N 1.30829 * 108.07580 * 179.97438 * 17 16 14 19 19 C 1.33243 * 109.83043 * 359.97438 * 18 17 16 20 20 N 1.30712 * 108.94577 * 359.75620 * 19 18 17 21 21 C 1.53781 * 113.60982 * 272.49356 * 11 10 9 22 22 S 1.70971 * 110.09981 * 359.97438 * 8 7 3 23 23 H 1.09008 * 109.46926 * 89.99776 * 1 2 3 24 24 H 1.08992 * 109.47471 * 210.00278 * 1 2 3 25 25 H 1.08998 * 109.46609 * 330.00236 * 1 2 3 26 26 H 1.09004 * 109.46779 * 89.73996 * 4 3 2 27 27 H 0.96709 * 113.99337 * 180.02562 * 5 4 3 28 28 H 1.48506 * 109.99834 * 60.00830 * 6 4 3 29 29 H 1.48502 * 110.00011 * 181.32094 * 6 4 3 30 30 H 0.97000 * 120.00023 * 359.97438 * 9 8 7 31 31 H 1.08999 * 109.46820 * 299.99234 * 10 9 8 32 32 H 1.08997 * 109.47288 * 59.98978 * 10 9 8 33 33 H 1.09001 * 113.61109 * 254.52800 * 13 11 10 34 34 H 1.09001 * 113.61351 * 25.33878 * 13 11 10 35 35 H 1.07995 * 125.96360 * 359.97438 * 17 16 14 36 36 H 1.07998 * 125.52560 * 179.97438 * 19 18 17 37 37 H 1.09000 * 113.62075 * 334.56665 * 21 11 10 38 38 H 1.09005 * 113.61184 * 105.46895 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2899 1.0793 0.0000 4 6 1.7414 2.4830 -0.0008 5 8 0.4846 2.5030 -0.6804 6 14 2.9366 3.6160 -0.8717 7 7 3.5851 0.8188 0.0064 8 6 3.9315 -0.4310 0.0063 9 7 5.2384 -0.8927 0.0129 10 6 5.5065 -2.3329 0.0126 11 6 7.0179 -2.5704 0.0200 12 1 7.5450 -1.9208 0.7186 13 6 7.4080 -4.0528 0.1430 14 6 8.5174 -3.7648 -0.8822 15 1 8.6522 -4.5604 -1.6149 16 7 9.7783 -3.3302 -0.2760 17 6 10.1111 -2.0776 0.0808 18 7 11.3181 -2.1062 0.5848 19 6 11.7859 -3.3536 0.5671 20 7 10.8769 -4.1405 0.0540 21 6 7.6430 -2.6038 -1.3846 22 16 2.5413 -1.4261 -0.0019 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3634 -0.8899 0.5138 25 1 -0.3632 0.8900 0.5138 26 1 1.6044 2.8201 1.0267 27 1 0.0727 3.3770 -0.7198 28 1 3.1321 3.1672 -2.2738 29 1 2.4225 5.0091 -0.8515 30 1 5.9755 -0.2622 0.0178 31 1 5.0630 -2.7852 0.8996 32 1 5.0726 -2.7831 -0.8803 33 1 7.7847 -4.3248 1.1291 34 1 6.6421 -4.7376 -0.2211 35 1 9.4905 -1.2007 -0.0293 36 1 12.7571 -3.6648 0.9225 37 1 6.9421 -2.8923 -2.1679 38 1 8.2095 -1.7059 -1.6319 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945870_15704122.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:57:40 Heat of formation + Delta-G solvation = 147.424336 kcal Electronic energy + Delta-G solvation = -22311.952732 eV Core-core repulsion = 18900.293994 eV Total energy + Delta-G solvation = -3411.658737 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.105 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -43.26462 -41.02196 -40.58273 -38.00472 -36.73892 -33.62699 -32.71688 -32.10803 -29.91939 -28.44979 -27.32261 -25.68858 -25.13331 -24.05240 -23.17097 -22.59483 -21.05675 -20.20769 -19.32806 -18.25004 -18.10182 -17.40281 -17.12961 -16.80817 -16.31743 -16.16627 -16.12530 -15.72136 -15.43197 -15.29531 -14.90177 -14.39350 -14.02549 -13.91904 -13.87206 -13.82436 -13.47275 -13.31807 -13.04661 -12.89166 -12.55955 -12.23480 -12.08434 -11.90837 -11.64975 -11.15008 -11.00841 -10.80675 -10.67655 -10.59700 -10.42908 -9.95544 -8.61160 -4.68738 0.06778 0.18370 0.57704 0.80583 1.13395 1.36602 1.74048 1.78376 1.97404 1.98539 2.14495 2.78312 2.90661 3.05568 3.18107 3.27794 3.29810 3.72700 3.78947 3.89570 3.92806 4.04360 4.19151 4.20893 4.23670 4.29532 4.36289 4.39208 4.42276 4.51802 4.58560 4.77424 4.87197 4.93700 5.12857 5.24536 5.35032 5.42009 5.52048 5.75871 6.21902 6.44455 6.93975 7.07751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.229 4.229 3 C 0.106 3.894 4 C -0.043 4.043 5 O -0.535 6.535 6 Si 0.718 3.282 7 N -0.538 5.538 8 C 0.319 3.681 9 N -0.694 5.694 10 C 0.133 3.867 11 C -0.126 4.126 12 H 0.104 0.896 13 C -0.133 4.133 14 C 0.129 3.871 15 H 0.118 0.882 16 N -0.364 5.364 17 C 0.253 3.747 18 N -0.543 5.543 19 C 0.200 3.800 20 N -0.315 5.315 21 C -0.137 4.137 22 S 0.098 5.902 23 H 0.071 0.929 24 H 0.057 0.943 25 H 0.085 0.915 26 H 0.082 0.918 27 H 0.382 0.618 28 H -0.263 1.263 29 H -0.265 1.265 30 H 0.413 0.587 31 H 0.073 0.927 32 H 0.074 0.926 33 H 0.084 0.916 34 H 0.110 0.890 35 H 0.215 0.785 36 H 0.219 0.781 37 H 0.115 0.885 38 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.656 -1.120 0.426 2.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.352 4.352 3 C -0.024 4.024 4 C -0.155 4.155 5 O -0.342 6.342 6 Si 0.618 3.382 7 N -0.265 5.265 8 C -0.052 4.052 9 N -0.336 5.336 10 C 0.009 3.991 11 C -0.145 4.145 12 H 0.122 0.878 13 C -0.172 4.172 14 C 0.026 3.974 15 H 0.136 0.864 16 N -0.155 5.155 17 C -0.044 4.044 18 N -0.270 5.270 19 C -0.103 4.103 20 N -0.142 5.142 21 C -0.176 4.176 22 S 0.346 5.654 23 H 0.090 0.910 24 H 0.076 0.924 25 H 0.104 0.896 26 H 0.100 0.900 27 H 0.230 0.770 28 H -0.187 1.187 29 H -0.191 1.191 30 H 0.251 0.749 31 H 0.091 0.909 32 H 0.092 0.908 33 H 0.102 0.898 34 H 0.128 0.872 35 H 0.232 0.768 36 H 0.235 0.765 37 H 0.133 0.867 38 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -0.902 -2.626 -0.307 2.794 hybrid contribution -1.211 1.391 -0.110 1.847 sum -2.113 -1.235 -0.417 2.483 Atomic orbital electron populations 1.20092 0.86484 1.02385 1.02716 1.25089 1.01388 0.92506 1.16212 1.18746 0.86512 0.94941 1.02170 1.23990 0.92309 0.97785 1.01368 1.86575 1.33393 1.35054 1.79144 0.93702 0.87326 0.75039 0.82086 1.65589 1.16815 1.16597 1.27520 1.23145 0.91757 0.91277 0.99045 1.43825 1.01779 1.06979 1.81004 1.21525 0.95369 0.79626 1.02590 1.22920 0.94766 0.98626 0.98159 0.87765 1.23371 0.97358 0.95769 1.00678 1.22157 0.79436 0.99569 0.96279 0.86418 1.50247 1.13109 1.06141 1.45977 1.25990 0.93744 0.90005 0.94658 1.70614 1.09436 1.22936 1.23971 1.26119 1.00016 0.86683 0.97472 1.78115 0.95584 1.18402 1.22117 1.23558 0.98326 0.98197 0.97483 1.83950 0.96640 1.10653 1.74143 0.91048 0.92417 0.89615 0.90017 0.76955 1.18748 1.19053 0.74872 0.90869 0.90833 0.89758 0.87151 0.76834 0.76451 0.86716 0.89652 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.06 8.96 36.01 0.32 0.26 16 2 C -0.23 -0.57 6.50 -36.02 -0.23 -0.80 16 3 C 0.11 0.30 5.95 -84.18 -0.50 -0.20 16 4 C -0.04 -0.04 2.81 36.01 0.10 0.06 16 5 O -0.53 -0.32 9.88 -35.23 -0.35 -0.67 16 6 Si 0.72 0.73 32.08 -169.99 -5.45 -4.72 16 7 N -0.54 -1.39 8.95 -11.36 -0.10 -1.50 16 8 C 0.32 0.28 8.24 -87.69 -0.72 -0.44 16 9 N -0.69 1.63 5.71 -62.30 -0.36 1.27 16 10 C 0.13 -0.59 5.37 -4.04 -0.02 -0.62 16 11 C -0.13 0.69 3.35 -89.81 -0.30 0.39 16 12 H 0.10 -0.55 7.03 -51.93 -0.37 -0.92 16 13 C -0.13 0.62 7.44 -25.92 -0.19 0.42 16 14 C 0.13 -0.44 5.21 -67.12 -0.35 -0.79 16 15 H 0.12 -0.40 8.14 -51.93 -0.42 -0.83 16 16 N -0.36 0.09 3.81 -55.32 -0.21 -0.12 16 17 C 0.25 -0.12 10.82 -90.66 -0.98 -1.10 16 18 N -0.54 -1.31 11.19 -15.83 -0.18 -1.49 16 19 C 0.20 0.37 13.03 -91.81 -1.20 -0.83 16 20 N -0.32 -0.80 12.70 29.29 0.37 -0.43 16 21 C -0.14 0.77 6.89 -25.92 -0.18 0.59 16 22 S 0.10 0.06 22.32 -107.50 -2.40 -2.34 16 23 H 0.07 0.10 8.14 -51.92 -0.42 -0.33 16 24 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 25 H 0.09 0.07 6.63 -51.93 -0.34 -0.27 16 26 H 0.08 -0.05 7.96 -51.93 -0.41 -0.46 16 27 H 0.38 -1.30 8.74 45.56 0.40 -0.90 16 28 H -0.26 -1.30 7.11 56.52 0.40 -0.89 16 29 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 30 H 0.41 -1.40 8.60 -40.82 -0.35 -1.76 16 31 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 32 H 0.07 -0.36 7.84 -51.93 -0.41 -0.76 16 33 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.11 -0.67 8.10 -51.93 -0.42 -1.09 16 35 H 0.22 -0.95 6.75 -52.49 -0.35 -1.30 16 36 H 0.22 -0.28 8.06 -52.49 -0.42 -0.71 16 37 H 0.11 -0.74 7.90 -51.93 -0.41 -1.15 16 38 H 0.08 -0.49 7.03 -51.93 -0.36 -0.85 16 LS Contribution 330.77 15.07 4.98 4.98 Total: 0.00 -9.50 330.77 -12.71 -22.21 By element: Atomic # 1 Polarization: -9.40 SS G_CDS: -4.77 Total: -14.16 kcal Atomic # 6 Polarization: 1.21 SS G_CDS: -4.25 Total: -3.05 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -0.47 Total: -2.26 kcal Atomic # 8 Polarization: -0.32 SS G_CDS: -0.35 Total: -0.67 kcal Atomic # 14 Polarization: 0.73 SS G_CDS: -5.45 Total: -4.72 kcal Atomic # 16 Polarization: 0.06 SS G_CDS: -2.40 Total: -2.34 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -9.50 -12.71 -22.21 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945870_15704122.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.636 kcal (2) G-P(sol) polarization free energy of solvation -9.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 160.136 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.212 kcal (6) G-S(sol) free energy of system = (1) + (5) 147.424 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds