Wall clock time and date at job start Mon Mar 8 2021 06:57:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86293 * 109.47253 * 2 1 4 4 C 1.50695 * 109.46947 * 120.00370 * 2 1 3 5 5 C 1.37986 * 120.32752 * 244.99816 * 4 2 1 6 6 N 1.32001 * 120.90266 * 179.97438 * 5 4 2 7 7 C 1.32335 * 121.64781 * 359.97438 * 6 5 4 8 8 N 1.39152 * 119.72050 * 179.97438 * 7 6 5 9 9 C 1.46497 * 119.99589 * 359.97438 * 8 7 6 10 10 C 1.53009 * 109.46881 * 180.02562 * 9 8 7 11 11 H 1.09003 * 112.90552 * 316.25803 * 10 9 8 12 12 C 1.53778 * 113.60997 * 87.50625 * 10 9 8 13 13 C 1.53791 * 87.07707 * 139.98248 * 12 10 9 14 14 H 1.09005 * 113.68776 * 220.00912 * 13 12 10 15 15 N 1.46494 * 113.61510 * 89.11722 * 13 12 10 16 16 C 1.34438 * 126.82245 * 347.50210 * 15 13 12 17 17 N 1.30831 * 108.07816 * 180.20890 * 16 15 13 18 18 C 1.33251 * 109.82578 * 359.59820 * 17 16 15 19 19 N 1.30712 * 108.94547 * 0.40841 * 18 17 16 20 20 C 1.53778 * 113.61364 * 185.00629 * 10 9 8 21 21 C 1.39349 * 120.56310 * 0.26028 * 7 6 5 22 22 F 1.35098 * 120.47029 * 179.72031 * 21 7 6 23 23 C 1.38444 * 119.05472 * 359.49082 * 21 7 6 24 24 H 0.96701 * 113.99320 * 299.99944 * 1 2 3 25 25 H 1.08999 * 109.46696 * 240.00123 * 2 1 3 26 26 H 1.48497 * 110.00076 * 178.68091 * 3 2 1 27 27 H 1.48497 * 110.00252 * 300.00265 * 3 2 1 28 28 H 1.07999 * 119.54794 * 359.97438 * 5 4 2 29 29 H 0.97002 * 120.00063 * 180.02562 * 8 7 6 30 30 H 1.09003 * 109.46945 * 60.00720 * 9 8 7 31 31 H 1.08995 * 109.47859 * 300.00292 * 9 8 7 32 32 H 1.08996 * 113.61613 * 25.43743 * 12 10 9 33 33 H 1.08997 * 113.61659 * 254.52674 * 12 10 9 34 34 H 1.08002 * 125.95849 * 359.93825 * 16 15 13 35 35 H 1.07996 * 125.52171 * 180.12701 * 18 17 16 36 36 H 1.08995 * 113.61556 * 105.46970 * 20 10 9 37 37 H 1.09004 * 113.61485 * 334.56632 * 20 10 9 38 38 H 1.08001 * 120.75822 * 180.24362 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6382 -0.0203 2.1937 6 7 3.0830 -0.6311 3.2761 7 6 2.8712 -1.9211 3.4819 8 7 3.3588 -2.5246 4.6370 9 6 4.1035 -1.7323 5.6188 10 6 4.5237 -2.6294 6.7850 11 1 3.7266 -3.2948 7.1169 12 6 5.8677 -3.3421 6.5606 13 6 6.1752 -3.0589 8.0406 14 1 7.2090 -2.7667 8.2249 15 7 5.7110 -4.1110 8.9481 16 6 4.8761 -5.1217 8.6500 17 7 4.7064 -5.8401 9.7302 18 6 5.4203 -5.3267 10.7313 19 7 6.0502 -4.2647 10.3023 20 6 5.2084 -1.8680 7.9322 21 6 2.1691 -2.6816 2.5489 22 9 1.9588 -3.9996 2.7582 23 6 1.6861 -2.0663 1.4066 24 1 -0.3932 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 3.5347 1.7702 0.0321 27 1 1.5616 2.4679 -1.2084 28 1 2.8301 1.0341 2.0604 29 1 3.2062 -3.4699 4.7918 30 1 3.4710 -0.9259 5.9899 31 1 4.9911 -1.3104 5.1474 32 1 6.5290 -2.8195 5.8695 33 1 5.7665 -4.4028 6.3309 34 1 4.4212 -5.3057 7.6880 35 1 5.4670 -5.7212 11.7355 36 1 4.5749 -1.7386 8.8097 37 1 5.6895 -0.9424 7.6160 38 1 1.1350 -2.6286 0.6673 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945870_17656566.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:57:43 Heat of formation + Delta-G solvation = 96.274173 kcal Electronic energy + Delta-G solvation = -24142.041582 eV Core-core repulsion = 20325.096205 eV Total energy + Delta-G solvation = -3816.945378 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.123 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -49.92480 -43.24224 -41.48820 -40.53176 -38.19562 -36.63665 -33.65859 -33.21154 -32.19577 -31.70558 -29.03277 -27.27108 -26.44514 -25.58864 -24.27212 -23.07961 -22.95437 -22.42658 -20.94198 -19.41756 -18.57256 -18.37725 -18.06227 -17.64782 -17.10531 -16.96944 -16.57695 -16.23716 -16.13611 -15.98485 -15.82512 -15.44357 -15.34639 -15.21227 -14.55232 -14.37002 -14.17080 -14.02222 -13.84059 -13.59994 -13.41463 -13.01162 -12.65909 -12.39238 -12.15213 -12.06398 -11.83567 -11.36162 -10.99673 -10.79212 -10.76507 -10.74222 -10.64465 -10.50900 -8.84584 -5.13206 -0.13047 0.06424 0.59348 1.15818 1.18092 1.54303 1.83365 1.89865 1.99579 2.49818 2.83638 2.96807 3.01468 3.15971 3.27336 3.30160 3.35897 3.43591 3.53890 3.77095 3.77953 3.89217 3.94662 3.99997 4.13015 4.28502 4.34810 4.36514 4.39576 4.42246 4.53256 4.62867 4.64304 4.70061 4.88046 4.92212 5.26345 5.28147 5.43583 5.77656 5.83182 6.05921 6.48261 6.86871 7.09036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.684 3.316 4 C -0.209 4.209 5 C 0.149 3.851 6 N -0.512 5.512 7 C 0.390 3.610 8 N -0.718 5.718 9 C 0.145 3.855 10 C -0.132 4.132 11 H 0.099 0.901 12 C -0.137 4.137 13 C 0.128 3.872 14 H 0.117 0.883 15 N -0.363 5.363 16 C 0.252 3.748 17 N -0.544 5.544 18 C 0.199 3.801 19 N -0.315 5.315 20 C -0.131 4.131 21 C -0.019 4.019 22 F -0.133 7.133 23 C -0.038 4.038 24 H 0.380 0.620 25 H 0.115 0.885 26 H -0.254 1.254 27 H -0.251 1.251 28 H 0.163 0.837 29 H 0.412 0.588 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.114 0.886 33 H 0.082 0.918 34 H 0.214 0.786 35 H 0.219 0.781 36 H 0.082 0.918 37 H 0.110 0.890 38 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.329 3.425 -0.746 3.521 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.167 4.167 3 Si 0.586 3.414 4 C -0.214 4.214 5 C -0.008 4.008 6 N -0.229 5.229 7 C 0.151 3.849 8 N -0.352 5.352 9 C 0.021 3.979 10 C -0.150 4.150 11 H 0.117 0.883 12 C -0.176 4.176 13 C 0.025 3.975 14 H 0.135 0.865 15 N -0.154 5.154 16 C -0.044 4.044 17 N -0.270 5.270 18 C -0.104 4.104 19 N -0.142 5.142 20 C -0.170 4.170 21 C -0.046 4.046 22 F -0.112 7.112 23 C -0.064 4.064 24 H 0.227 0.773 25 H 0.133 0.867 26 H -0.178 1.178 27 H -0.176 1.176 28 H 0.180 0.820 29 H 0.249 0.751 30 H 0.091 0.909 31 H 0.092 0.908 32 H 0.132 0.868 33 H 0.101 0.899 34 H 0.231 0.769 35 H 0.236 0.764 36 H 0.101 0.899 37 H 0.129 0.871 38 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 1.768 4.459 -0.505 4.824 hybrid contribution -0.537 -1.770 -0.888 2.052 sum 1.231 2.689 -1.393 3.269 Atomic orbital electron populations 1.86522 1.17039 1.81671 1.49300 1.24865 0.85262 1.09931 0.96624 0.94888 0.81130 0.77560 0.87853 1.20941 1.05658 0.94661 1.00165 1.22310 0.91706 0.99210 0.87583 1.67282 1.24972 1.07281 1.23390 1.18406 0.90612 0.88955 0.86919 1.44515 1.59535 1.12139 1.18970 1.21292 0.96298 0.93264 0.87020 1.23002 0.97239 0.98719 0.96085 0.88285 1.23551 0.97479 1.02668 0.93881 1.22190 1.00031 0.87013 0.88309 0.86499 1.50249 1.35093 1.21884 1.08136 1.25969 0.92319 0.86162 0.99986 1.70614 1.26414 1.30841 0.99166 1.26118 0.92864 0.91083 1.00289 1.78109 1.24715 1.21295 0.90090 1.23347 0.97732 0.97361 0.98567 1.18005 1.08644 0.79487 0.98440 1.91495 1.93715 1.31075 1.94935 1.21298 0.95478 0.94451 0.95171 0.77284 0.86727 1.17847 1.17582 0.82005 0.75085 0.90875 0.90839 0.86784 0.89939 0.76937 0.76445 0.89932 0.87137 0.83306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.52 12.84 -35.23 -0.45 0.07 16 2 C -0.06 0.09 2.82 36.00 0.10 0.19 16 3 Si 0.68 -1.69 29.83 -169.99 -5.07 -6.76 16 4 C -0.21 0.21 5.36 -104.47 -0.56 -0.35 16 5 C 0.15 -0.16 9.84 -17.57 -0.17 -0.33 16 6 N -0.51 -0.20 9.57 -12.36 -0.12 -0.32 16 7 C 0.39 0.10 7.49 -154.85 -1.16 -1.06 16 8 N -0.72 1.37 5.71 -60.33 -0.34 1.02 16 9 C 0.14 -0.47 5.53 -4.04 -0.02 -0.49 16 10 C -0.13 0.59 3.35 -89.81 -0.30 0.29 16 11 H 0.10 -0.42 7.02 -51.93 -0.36 -0.79 16 12 C -0.14 0.66 6.89 -25.92 -0.18 0.49 16 13 C 0.13 -0.35 5.21 -67.12 -0.35 -0.70 16 14 H 0.12 -0.33 8.14 -51.93 -0.42 -0.75 16 15 N -0.36 -0.13 3.81 -55.31 -0.21 -0.34 16 16 C 0.25 0.03 10.82 -90.65 -0.98 -0.95 16 17 N -0.54 -1.56 11.19 -15.83 -0.18 -1.74 16 18 C 0.20 0.45 13.03 -91.80 -1.20 -0.75 16 19 N -0.32 -0.94 12.70 29.29 0.37 -0.57 16 20 C -0.13 0.49 7.44 -25.92 -0.19 0.30 16 21 C -0.02 -0.01 7.35 -39.09 -0.29 -0.30 16 22 F -0.13 -0.17 16.65 2.25 0.04 -0.13 16 23 C -0.04 0.00 9.82 -39.26 -0.39 -0.38 16 24 H 0.38 -1.81 8.70 45.56 0.40 -1.41 16 25 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 26 H -0.25 0.06 7.11 56.52 0.40 0.46 16 27 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 28 H 0.16 -0.56 4.90 -52.49 -0.26 -0.81 16 29 H 0.41 -1.23 7.94 -40.82 -0.32 -1.56 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.07 -0.22 7.84 -51.93 -0.41 -0.63 16 32 H 0.11 -0.63 7.89 -51.93 -0.41 -1.04 16 33 H 0.08 -0.41 7.03 -51.93 -0.37 -0.78 16 34 H 0.21 -0.80 6.75 -52.49 -0.35 -1.16 16 35 H 0.22 -0.22 8.06 -52.49 -0.42 -0.64 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.11 -0.56 8.10 -51.93 -0.42 -0.98 16 38 H 0.15 -0.11 8.06 -52.49 -0.42 -0.54 16 LS Contribution 326.15 15.07 4.91 4.91 Total: 0.00 -9.15 326.15 -10.97 -20.11 By element: Atomic # 1 Polarization: -7.98 SS G_CDS: -4.23 Total: -12.21 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -5.68 Total: -4.04 kcal Atomic # 7 Polarization: -1.47 SS G_CDS: -0.48 Total: -1.95 kcal Atomic # 8 Polarization: 0.52 SS G_CDS: -0.45 Total: 0.07 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.04 Total: -0.13 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.07 Total: -6.76 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -9.15 -10.97 -20.11 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945870_17656566.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.386 kcal (2) G-P(sol) polarization free energy of solvation -9.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.112 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds