Wall clock time and date at job start Mon Mar 8 2021 06:57:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86295 * 109.47433 * 2 1 4 4 C 1.50704 * 109.47201 * 120.00309 * 2 1 3 5 5 C 1.38599 * 120.72153 * 64.99846 * 4 2 1 6 6 N 1.32279 * 119.19432 * 180.02562 * 5 4 2 7 7 C 1.32496 * 120.74193 * 0.02562 * 6 5 4 8 8 N 1.38410 * 119.21316 * 179.97438 * 7 6 5 9 9 C 1.46499 * 119.99501 * 179.97438 * 8 7 6 10 10 C 1.53000 * 109.46974 * 179.97438 * 9 8 7 11 11 H 1.09002 * 112.84949 * 45.33483 * 10 9 8 12 12 C 1.53781 * 113.61707 * 176.53042 * 10 9 8 13 13 C 1.53777 * 87.08336 * 140.06298 * 12 10 9 14 14 H 1.08998 * 113.61354 * 219.93545 * 13 12 10 15 15 N 1.46500 * 113.61088 * 89.11940 * 13 12 10 16 16 C 1.35317 * 125.86628 * 275.00023 * 15 13 12 17 17 C 1.35349 * 106.17705 * 180.02562 * 16 15 13 18 18 N 1.33775 * 106.49348 * 359.97438 * 17 16 15 19 19 N 1.28638 * 108.88732 * 359.73483 * 18 17 16 20 20 C 1.53775 * 87.07992 * 334.56762 * 13 12 10 21 21 N 1.32490 * 121.56427 * 0.27376 * 7 6 5 22 22 C 1.32273 * 120.74194 * 359.44289 * 21 7 6 23 23 H 0.96703 * 113.99529 * 299.99817 * 1 2 3 24 24 H 1.08998 * 109.47378 * 239.99823 * 2 1 3 25 25 H 1.48506 * 110.00367 * 178.68108 * 3 2 1 26 26 H 1.48501 * 109.99963 * 300.00152 * 3 2 1 27 27 H 1.07999 * 120.40216 * 359.97438 * 5 4 2 28 28 H 0.96991 * 120.00196 * 359.97438 * 8 7 6 29 29 H 1.09001 * 109.46950 * 60.00213 * 9 8 7 30 30 H 1.08992 * 109.47264 * 300.00108 * 9 8 7 31 31 H 1.08997 * 113.61673 * 254.61847 * 12 10 9 32 32 H 1.09009 * 113.61202 * 25.43077 * 12 10 9 33 33 H 1.08003 * 126.91091 * 359.97250 * 16 15 13 34 34 H 1.08001 * 126.75622 * 179.97438 * 17 16 15 35 35 H 1.08993 * 113.61636 * 270.87622 * 20 13 12 36 36 H 1.09008 * 113.61006 * 139.97865 * 20 13 12 37 37 H 1.08003 * 120.40273 * 180.29920 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 1.6926 -2.0634 1.4140 6 7 2.1470 -2.6565 2.5055 7 6 2.8225 -1.9721 3.4170 8 7 3.2830 -2.6244 4.5475 9 6 4.0322 -1.8844 5.5660 10 6 4.4207 -2.8323 6.7024 11 1 4.8192 -3.7815 6.3443 12 6 5.2867 -2.1708 7.7875 13 6 4.4649 -2.9649 8.8165 14 1 4.2239 -2.3967 9.7149 15 7 5.0168 -4.2894 9.1120 16 6 4.7898 -5.4191 8.4026 17 6 5.4880 -6.3997 9.0215 18 7 6.1003 -5.8293 10.0652 19 7 5.8056 -4.5773 10.0875 20 6 3.3318 -2.9874 7.7772 21 7 3.0626 -0.6769 3.2747 22 6 2.6409 -0.0247 2.2039 23 1 -0.3933 0.4417 0.7651 24 1 1.7924 -0.5138 -0.8899 25 1 3.5347 1.7702 0.0321 26 1 1.5615 2.4678 -1.2085 27 1 1.1416 -2.6263 0.6751 28 1 3.1096 -3.5714 4.6655 29 1 3.4116 -1.0799 5.9606 30 1 4.9329 -1.4631 5.1198 31 1 6.3359 -2.4632 7.7472 32 1 5.1505 -1.0915 7.8571 33 1 4.1745 -5.5186 7.5206 34 1 5.5404 -7.4383 8.7301 35 1 2.6601 -2.1318 7.8449 36 1 2.8029 -3.9393 7.7285 37 1 2.8438 1.0300 2.0912 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945872_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:57:46 Heat of formation + Delta-G solvation = 167.162664 kcal Electronic energy + Delta-G solvation = -21895.914484 eV Core-core repulsion = 18486.071127 eV Total energy + Delta-G solvation = -3409.843357 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.128 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -44.32301 -42.15591 -40.74329 -38.26132 -36.79921 -34.77897 -34.15802 -32.59551 -31.99830 -29.37159 -27.34375 -26.57307 -26.03638 -24.90097 -23.56897 -23.17923 -22.67464 -21.06060 -19.50583 -18.80577 -18.33937 -18.13181 -17.42093 -16.86602 -16.58554 -16.46067 -16.12429 -15.97658 -15.79592 -15.44835 -15.17948 -15.10035 -14.64133 -14.18301 -14.12428 -13.94258 -13.53867 -13.23113 -12.71386 -12.44832 -12.28753 -12.20622 -12.03108 -11.92908 -11.83739 -11.76086 -11.40081 -11.02053 -10.65431 -10.35388 -10.09582 -9.21437 -5.16700 -0.01083 0.08590 0.58812 1.16799 1.21496 1.51344 1.65310 1.66240 1.87966 2.72996 2.75460 2.90405 3.03672 3.16148 3.31269 3.36216 3.51099 3.54530 3.63774 3.72428 3.83508 3.90192 4.06093 4.12317 4.14376 4.21101 4.26240 4.33334 4.43397 4.45755 4.51241 4.59323 4.65998 4.75458 4.84038 5.11520 5.19656 5.59487 5.65747 5.89489 6.28447 6.45686 7.20079 7.56287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.680 3.320 4 C -0.293 4.293 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.566 3.434 8 N -0.696 5.696 9 C 0.149 3.851 10 C -0.131 4.131 11 H 0.102 0.898 12 C -0.128 4.128 13 C 0.111 3.889 14 H 0.127 0.873 15 N -0.274 5.274 16 C -0.052 4.052 17 C -0.049 4.049 18 N -0.270 5.270 19 N -0.082 5.082 20 C -0.135 4.135 21 N -0.562 5.562 22 C 0.200 3.800 23 H 0.379 0.621 24 H 0.116 0.884 25 H -0.255 1.255 26 H -0.250 1.250 27 H 0.170 0.830 28 H 0.415 0.585 29 H 0.076 0.924 30 H 0.073 0.927 31 H 0.085 0.915 32 H 0.115 0.885 33 H 0.188 0.812 34 H 0.191 0.809 35 H 0.116 0.884 36 H 0.085 0.915 37 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.366 3.519 -1.676 5.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.159 4.159 3 Si 0.582 3.418 4 C -0.301 4.301 5 C 0.055 3.945 6 N -0.290 5.290 7 C 0.209 3.791 8 N -0.333 5.333 9 C 0.024 3.976 10 C -0.150 4.150 11 H 0.120 0.880 12 C -0.167 4.167 13 C 0.009 3.991 14 H 0.145 0.855 15 N -0.068 5.068 16 C -0.203 4.203 17 C -0.206 4.206 18 N -0.136 5.136 19 N -0.061 5.061 20 C -0.173 4.173 21 N -0.285 5.285 22 C 0.033 3.967 23 H 0.226 0.774 24 H 0.133 0.867 25 H -0.180 1.180 26 H -0.175 1.175 27 H 0.188 0.812 28 H 0.252 0.748 29 H 0.094 0.906 30 H 0.092 0.908 31 H 0.103 0.897 32 H 0.133 0.867 33 H 0.205 0.795 34 H 0.208 0.792 35 H 0.134 0.866 36 H 0.104 0.896 37 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -1.577 3.981 -0.401 4.301 hybrid contribution -0.900 -1.002 -1.941 2.362 sum -2.476 2.980 -2.342 4.527 Atomic orbital electron populations 1.86519 1.17102 1.81631 1.49265 1.24706 0.85131 1.09643 0.96401 0.95034 0.81085 0.77698 0.88031 1.21728 1.08961 0.97840 1.01614 1.22847 0.89105 0.90977 0.91541 1.67982 1.16601 1.39999 1.04467 1.19368 0.87218 0.85535 0.86933 1.44082 1.59015 1.12158 1.18061 1.21301 0.96176 0.93575 0.86505 1.23018 0.97272 1.00450 0.94270 0.88008 1.23330 0.99895 1.01064 0.92430 1.22511 0.96214 0.79880 1.00537 0.85489 1.47184 1.31554 1.09092 1.18948 1.23600 1.07437 0.86396 1.02840 1.23687 1.00135 1.01595 0.95207 1.75182 1.20445 0.99085 1.18858 1.78378 1.08331 1.10755 1.08629 1.23526 0.95827 1.05086 0.92866 1.67904 1.26997 1.08273 1.25307 1.22770 0.88114 0.99216 0.86606 0.77366 0.86687 1.17985 1.17485 0.81244 0.74811 0.90626 0.90848 0.89680 0.86668 0.79489 0.79210 0.86618 0.89613 0.81638 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.76 12.85 -35.23 -0.45 0.31 16 2 C -0.05 0.09 2.83 36.01 0.10 0.19 16 3 Si 0.68 -1.76 29.88 -169.99 -5.08 -6.84 16 4 C -0.29 0.30 5.36 -104.35 -0.56 -0.26 16 5 C 0.22 0.03 10.99 -17.23 -0.19 -0.16 16 6 N -0.57 -0.89 10.46 -13.93 -0.15 -1.04 16 7 C 0.57 0.56 8.43 -322.80 -2.72 -2.16 16 8 N -0.70 1.20 5.70 -62.31 -0.36 0.85 16 9 C 0.15 -0.52 5.48 -4.04 -0.02 -0.54 16 10 C -0.13 0.64 3.33 -89.81 -0.30 0.34 16 11 H 0.10 -0.47 6.98 -51.93 -0.36 -0.83 16 12 C -0.13 0.55 7.44 -25.92 -0.19 0.36 16 13 C 0.11 -0.36 5.11 -67.12 -0.34 -0.70 16 14 H 0.13 -0.48 8.14 -51.93 -0.42 -0.90 16 15 N -0.27 -0.06 3.52 -53.98 -0.19 -0.25 16 16 C -0.05 0.05 9.68 -17.05 -0.17 -0.11 16 17 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 18 N -0.27 -1.34 12.41 30.24 0.38 -0.96 16 19 N -0.08 -0.34 13.17 60.35 0.79 0.45 16 20 C -0.13 0.72 6.88 -25.92 -0.18 0.54 16 21 N -0.56 -0.47 9.59 -13.93 -0.13 -0.60 16 22 C 0.20 -0.17 9.92 -17.22 -0.17 -0.34 16 23 H 0.38 -1.92 8.70 45.56 0.40 -1.53 16 24 H 0.12 -0.19 7.96 -51.93 -0.41 -0.61 16 25 H -0.26 0.04 7.11 56.52 0.40 0.44 16 26 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 27 H 0.17 -0.26 8.06 -52.49 -0.42 -0.68 16 28 H 0.41 -1.20 8.59 -40.82 -0.35 -1.55 16 29 H 0.08 -0.26 7.88 -51.93 -0.41 -0.67 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 32 H 0.12 -0.67 8.10 -51.92 -0.42 -1.09 16 33 H 0.19 -0.89 6.74 -52.48 -0.35 -1.25 16 34 H 0.19 -0.35 8.06 -52.49 -0.42 -0.77 16 35 H 0.12 -0.72 7.92 -51.93 -0.41 -1.13 16 36 H 0.09 -0.45 6.98 -51.92 -0.36 -0.82 16 37 H 0.17 -0.57 5.07 -52.48 -0.27 -0.84 16 LS Contribution 314.74 15.07 4.74 4.74 Total: 0.00 -10.06 314.74 -9.66 -19.72 By element: Atomic # 1 Polarization: -9.00 SS G_CDS: -4.26 Total: -13.27 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -4.95 Total: -3.12 kcal Atomic # 7 Polarization: -1.90 SS G_CDS: 0.35 Total: -1.55 kcal Atomic # 8 Polarization: 0.76 SS G_CDS: -0.45 Total: 0.31 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.08 Total: -6.84 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -10.06 -9.66 -19.72 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945872_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 186.886 kcal (2) G-P(sol) polarization free energy of solvation -10.062 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 176.823 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.661 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.723 kcal (6) G-S(sol) free energy of system = (1) + (5) 167.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds