Wall clock time and date at job start Mon Mar 8 2021 06:57:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.33316 * 125.95115 * 2 1 4 4 C 1.50707 * 122.71184 * 359.97438 * 3 2 1 5 5 O 1.42899 * 109.47033 * 330.00514 * 4 3 2 6 6 Si 1.86296 * 109.47202 * 210.00099 * 4 3 2 7 7 N 1.32117 * 114.58112 * 179.75029 * 3 2 1 8 8 C 1.29694 * 116.86361 * 0.47766 * 7 3 2 9 9 N 1.38605 * 124.94739 * 179.81238 * 8 7 3 10 10 C 1.46499 * 119.99611 * 179.44056 * 9 8 7 11 11 C 1.53004 * 109.47198 * 180.27670 * 10 9 8 12 12 H 1.08996 * 112.84823 * 316.19572 * 11 10 9 13 13 C 1.53787 * 113.61355 * 87.50373 * 11 10 9 14 14 C 1.53783 * 87.08023 * 139.98452 * 13 11 10 15 15 H 1.08998 * 113.68844 * 220.00959 * 14 13 11 16 16 N 1.46499 * 113.61670 * 89.11251 * 14 13 11 17 17 C 1.35312 * 125.86617 * 347.21966 * 16 14 13 18 18 C 1.35351 * 106.17225 * 179.90003 * 17 16 14 19 19 N 1.33770 * 106.49502 * 0.35311 * 18 17 16 20 20 N 1.28631 * 108.88776 * 359.77551 * 19 18 17 21 21 C 1.53782 * 113.61417 * 185.00090 * 11 10 9 22 22 S 1.70966 * 110.09955 * 359.54206 * 8 7 3 23 23 H 1.08999 * 109.46973 * 179.97438 * 1 2 3 24 24 H 1.09005 * 109.46898 * 299.97871 * 1 2 3 25 25 H 1.09002 * 109.47021 * 59.97856 * 1 2 3 26 26 H 1.09007 * 109.46465 * 90.00055 * 4 3 2 27 27 H 0.96705 * 113.99484 * 299.99323 * 5 4 3 28 28 H 1.48500 * 110.00110 * 58.68401 * 6 4 3 29 29 H 1.48498 * 109.99792 * 180.02562 * 6 4 3 30 30 H 0.97001 * 120.00540 * 359.72147 * 9 8 7 31 31 H 1.09009 * 109.47454 * 300.27439 * 10 9 8 32 32 H 1.08998 * 109.47492 * 60.27734 * 10 9 8 33 33 H 1.08998 * 113.61128 * 254.53330 * 13 11 10 34 34 H 1.08998 * 113.61325 * 25.42994 * 13 11 10 35 35 H 1.07997 * 126.91291 * 0.02562 * 17 16 14 36 36 H 1.08004 * 126.75252 * 180.12033 * 18 17 16 37 37 H 1.09001 * 113.61616 * 334.56263 * 21 11 10 38 38 H 1.09000 * 113.61435 * 105.38746 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0792 0.0000 4 6 1.7414 2.4830 -0.0006 5 8 0.4815 2.5019 -0.6746 6 14 2.9326 3.6146 -0.8787 7 7 3.5850 0.8188 0.0052 8 6 3.9315 -0.4310 0.0000 9 7 5.2384 -0.8926 0.0005 10 6 5.5065 -2.3329 0.0066 11 6 7.0180 -2.5703 0.0127 12 1 7.5510 -1.9223 -0.6830 13 6 7.6311 -2.6002 1.4228 14 6 8.5098 -3.7624 0.9306 15 1 8.6383 -4.5563 1.6663 16 7 9.7758 -3.3292 0.3340 17 6 10.0915 -2.0629 -0.0233 18 6 11.3472 -2.1150 -0.5258 19 7 11.7301 -3.3950 -0.4594 20 7 10.7767 -4.0887 0.0547 21 6 7.4091 -4.0530 -0.1034 22 16 2.5413 -1.4261 0.0001 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5135 0.8902 25 1 -0.3633 0.5142 -0.8898 26 1 1.6089 2.8216 1.0271 27 1 0.5241 2.2119 -1.5961 28 1 3.1464 3.1453 -2.2712 29 1 2.4036 5.0022 -0.8855 30 1 5.9756 -0.2621 0.0008 31 1 5.0647 -2.7810 0.8967 32 1 5.0710 -2.7873 -0.8833 33 1 8.1953 -1.7017 1.6727 34 1 6.9234 -2.8868 2.2006 35 1 9.4679 -1.1866 0.0748 36 1 11.9249 -1.2867 -0.9088 37 1 6.6408 -4.7368 0.2573 38 1 7.7928 -4.3277 -1.0860 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945872_15704122.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:57:54 Heat of formation + Delta-G solvation = 154.853781 kcal Electronic energy + Delta-G solvation = -22385.085730 eV Core-core repulsion = 18973.749158 eV Total energy + Delta-G solvation = -3411.336572 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.105 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -44.36434 -41.17421 -40.77856 -38.14196 -36.75846 -34.15465 -32.81560 -32.03625 -30.10986 -28.58556 -27.40771 -25.78199 -25.25695 -24.17529 -23.61129 -22.91200 -21.23755 -20.57215 -19.22603 -18.40446 -18.01676 -17.61565 -17.33563 -16.98612 -16.53158 -16.35783 -16.09659 -15.68274 -15.61749 -15.30840 -15.06323 -14.40285 -14.18499 -14.02647 -13.95662 -13.78740 -13.51825 -13.48632 -12.79508 -12.77661 -12.60736 -12.40030 -12.20562 -12.08506 -11.85015 -11.78599 -11.14329 -11.07083 -10.66669 -10.55499 -10.38781 -10.04872 -8.71546 -4.71502 -0.03945 0.10444 0.54927 0.71041 1.16734 1.34181 1.62402 1.71951 1.79009 1.91363 2.07549 2.65965 2.81136 3.04490 3.17310 3.26391 3.46609 3.48602 3.68104 3.79968 3.97680 4.03319 4.10839 4.13172 4.15374 4.20683 4.27969 4.28766 4.36450 4.45026 4.55038 4.67440 4.73421 4.74266 4.83561 5.00181 5.16597 5.22280 5.42960 5.55163 6.12774 6.32524 6.88007 7.52905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C -0.241 4.241 3 C 0.068 3.932 4 C -0.042 4.042 5 O -0.525 6.525 6 Si 0.721 3.279 7 N -0.537 5.537 8 C 0.317 3.683 9 N -0.694 5.694 10 C 0.133 3.867 11 C -0.126 4.126 12 H 0.106 0.894 13 C -0.135 4.135 14 C 0.112 3.888 15 H 0.128 0.872 16 N -0.275 5.275 17 C -0.052 4.052 18 C -0.048 4.048 19 N -0.269 5.269 20 N -0.081 5.081 21 C -0.130 4.130 22 S 0.101 5.899 23 H 0.058 0.942 24 H 0.076 0.924 25 H 0.080 0.920 26 H 0.124 0.876 27 H 0.375 0.625 28 H -0.268 1.268 29 H -0.260 1.260 30 H 0.413 0.587 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.088 0.912 34 H 0.116 0.884 35 H 0.189 0.811 36 H 0.191 0.809 37 H 0.115 0.885 38 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.293 -0.548 1.837 2.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.364 4.364 3 C -0.063 4.063 4 C -0.154 4.154 5 O -0.331 6.331 6 Si 0.622 3.378 7 N -0.264 5.264 8 C -0.054 4.054 9 N -0.336 5.336 10 C 0.008 3.992 11 C -0.145 4.145 12 H 0.124 0.876 13 C -0.173 4.173 14 C 0.009 3.991 15 H 0.146 0.854 16 N -0.069 5.069 17 C -0.203 4.203 18 C -0.205 4.205 19 N -0.135 5.135 20 N -0.061 5.061 21 C -0.169 4.169 22 S 0.350 5.650 23 H 0.077 0.923 24 H 0.095 0.905 25 H 0.098 0.902 26 H 0.142 0.858 27 H 0.223 0.777 28 H -0.192 1.192 29 H -0.186 1.186 30 H 0.251 0.749 31 H 0.093 0.907 32 H 0.091 0.909 33 H 0.106 0.894 34 H 0.134 0.866 35 H 0.206 0.794 36 H 0.208 0.792 37 H 0.133 0.867 38 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -1.537 -2.145 1.779 3.183 hybrid contribution -1.194 1.557 -0.617 2.057 sum -2.730 -0.588 1.162 3.025 Atomic orbital electron populations 1.20153 0.86416 1.01706 1.03678 1.25118 1.01331 0.92689 1.17215 1.20075 0.86825 0.97160 1.02197 1.24473 0.91899 0.95334 1.03714 1.86629 1.28601 1.89030 1.28830 0.93669 0.86115 0.76468 0.81568 1.65727 1.17035 1.16424 1.27177 1.23238 0.91733 0.91508 0.98936 1.43835 1.01839 1.06973 1.80918 1.21530 0.95330 0.79671 1.02625 1.22942 0.94876 0.98477 0.98201 0.87589 1.23540 0.98238 0.98028 0.97511 1.22489 0.79236 1.00191 0.97149 0.85415 1.47173 1.13183 1.06225 1.40294 1.23606 0.99735 0.90065 1.06882 1.23698 0.94892 0.96372 1.05578 1.75184 1.19995 1.03546 1.14781 1.78382 0.91921 1.19949 1.15825 1.23357 0.97088 0.96079 1.00362 1.83991 0.96556 1.10576 1.73895 0.92270 0.90492 0.90195 0.85821 0.77658 1.19247 1.18583 0.74875 0.90750 0.90877 0.89377 0.86569 0.79429 0.79171 0.86713 0.89508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.02 8.91 36.01 0.32 0.34 16 2 C -0.24 -0.22 6.50 -36.02 -0.23 -0.46 16 3 C 0.07 0.10 5.91 -84.18 -0.50 -0.40 16 4 C -0.04 -0.02 2.94 36.01 0.11 0.08 16 5 O -0.53 -0.32 10.17 -35.23 -0.36 -0.68 16 6 Si 0.72 0.47 32.09 -169.99 -5.45 -4.99 16 7 N -0.54 -0.79 8.95 -11.36 -0.10 -0.89 16 8 C 0.32 -0.03 8.24 -87.68 -0.72 -0.75 16 9 N -0.69 2.15 5.71 -62.29 -0.36 1.79 16 10 C 0.13 -0.68 5.37 -4.04 -0.02 -0.70 16 11 C -0.13 0.76 3.33 -89.80 -0.30 0.46 16 12 H 0.11 -0.61 6.96 -51.93 -0.36 -0.97 16 13 C -0.13 0.84 6.88 -25.91 -0.18 0.66 16 14 C 0.11 -0.45 5.11 -67.11 -0.34 -0.79 16 15 H 0.13 -0.57 8.14 -51.93 -0.42 -0.99 16 16 N -0.27 0.13 3.52 -53.97 -0.19 -0.06 16 17 C -0.05 0.09 9.68 -17.05 -0.17 -0.08 16 18 C -0.05 -0.03 12.05 -17.74 -0.21 -0.24 16 19 N -0.27 -1.20 12.41 30.24 0.38 -0.83 16 20 N -0.08 -0.30 13.16 60.35 0.79 0.50 16 21 C -0.13 0.69 7.44 -25.91 -0.19 0.49 16 22 S 0.10 -0.04 22.32 -107.50 -2.40 -2.44 16 23 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 24 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 25 H 0.08 -0.08 6.39 -51.93 -0.33 -0.41 16 26 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 27 H 0.38 -0.67 8.13 45.56 0.37 -0.29 16 28 H -0.27 -0.92 7.11 56.52 0.40 -0.52 16 29 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 30 H 0.41 -1.68 8.60 -40.82 -0.35 -2.03 16 31 H 0.07 -0.42 7.84 -51.92 -0.41 -0.83 16 32 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 33 H 0.09 -0.54 6.99 -51.93 -0.36 -0.91 16 34 H 0.12 -0.84 7.90 -51.93 -0.41 -1.25 16 35 H 0.19 -1.04 6.73 -52.49 -0.35 -1.39 16 36 H 0.19 -0.44 8.06 -52.48 -0.42 -0.87 16 37 H 0.11 -0.80 8.10 -51.93 -0.42 -1.22 16 38 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 LS Contribution 329.30 15.07 4.96 4.96 Total: 0.00 -8.96 329.30 -9.95 -18.90 By element: Atomic # 1 Polarization: -10.12 SS G_CDS: -4.78 Total: -14.89 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -2.44 Total: -1.37 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: 0.52 Total: 0.50 kcal Atomic # 8 Polarization: -0.32 SS G_CDS: -0.36 Total: -0.68 kcal Atomic # 14 Polarization: 0.47 SS G_CDS: -5.45 Total: -4.99 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.40 Total: -2.44 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -8.96 -9.95 -18.90 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945872_15704122.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 173.758 kcal (2) G-P(sol) polarization free energy of solvation -8.958 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 164.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.904 kcal (6) G-S(sol) free energy of system = (1) + (5) 154.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds