Wall clock time and date at job start Mon Mar 8 2021 07:00:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50699 * 109.47152 * 119.99802 * 2 1 3 5 5 C 1.38603 * 120.71626 * 244.72674 * 4 2 1 6 6 N 1.32279 * 119.19448 * 179.72267 * 5 4 2 7 7 C 1.32494 * 120.73816 * 0.55982 * 6 5 4 8 8 N 1.38410 * 119.21743 * 179.73464 * 7 6 5 9 9 C 1.46500 * 119.99832 * 359.97438 * 8 7 6 10 10 C 1.52997 * 109.46915 * 180.02562 * 9 8 7 11 11 H 1.09000 * 112.85267 * 316.19155 * 10 9 8 12 12 C 1.53778 * 113.61849 * 87.49980 * 10 9 8 13 13 C 1.53781 * 87.08219 * 139.97808 * 12 10 9 14 14 H 1.08996 * 113.69783 * 220.00645 * 13 12 10 15 15 N 1.46509 * 113.61115 * 89.11835 * 13 12 10 16 16 C 1.34949 * 126.03740 * 347.21693 * 15 13 12 17 17 C 1.35316 * 107.74370 * 179.84103 * 16 15 13 18 18 C 1.39865 * 107.92146 * 0.42606 * 17 16 15 19 19 N 1.30843 * 108.20370 * 359.73562 * 18 17 16 20 20 C 1.53783 * 87.08298 * 334.57156 * 13 12 10 21 21 N 1.32499 * 121.56689 * 359.70897 * 7 6 5 22 22 C 1.32272 * 120.73472 * 0.02562 * 21 7 6 23 23 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 24 24 H 1.08997 * 109.47332 * 240.00042 * 2 1 3 25 25 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 26 26 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 27 27 H 1.08000 * 120.40916 * 359.97438 * 5 4 2 28 28 H 0.96997 * 119.99765 * 179.97438 * 8 7 6 29 29 H 1.09000 * 109.46962 * 299.99913 * 9 8 7 30 30 H 1.09000 * 109.47180 * 60.00081 * 9 8 7 31 31 H 1.08992 * 113.61849 * 254.52702 * 12 10 9 32 32 H 1.09000 * 113.61376 * 25.43589 * 12 10 9 33 33 H 1.07999 * 126.12216 * 0.02562 * 16 15 13 34 34 H 1.07994 * 126.03809 * 180.16163 * 17 16 15 35 35 H 1.08002 * 125.90033 * 179.72201 * 18 17 16 36 36 H 1.09001 * 113.60696 * 270.88176 * 20 13 12 37 37 H 1.08995 * 113.69128 * 139.99225 * 20 13 12 38 38 H 1.08005 * 120.39585 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6470 -0.0261 2.2004 6 7 3.0689 -0.6782 3.2712 7 6 2.8238 -1.9722 3.4163 8 7 3.2847 -2.6245 4.5467 9 6 4.0343 -1.8845 5.5649 10 6 4.4244 -2.8327 6.7005 11 1 3.6101 -3.4927 6.9994 12 6 5.7564 -3.5634 6.4630 13 6 6.0538 -3.3418 7.9554 14 1 7.0911 -3.0776 8.1609 15 7 5.5593 -4.4176 8.8183 16 6 4.6995 -5.3931 8.4574 17 6 4.4989 -6.1858 9.5356 18 6 5.2545 -5.6716 10.5943 19 7 5.8906 -4.6116 10.1655 20 6 5.1118 -2.1285 7.8823 21 7 2.1474 -2.6565 2.5053 22 6 1.6931 -2.0633 1.4139 23 1 -0.3934 0.4416 -0.7651 24 1 1.7924 -0.5138 -0.8899 25 1 1.5877 2.4585 -1.2243 26 1 1.5613 2.4680 1.2084 27 1 2.8542 1.0276 2.0854 28 1 3.1113 -3.5715 4.6647 29 1 4.9350 -1.4632 5.1183 30 1 3.4140 -1.0799 5.9597 31 1 5.6368 -4.6125 6.1927 32 1 6.4353 -3.0288 5.7985 33 1 4.2540 -5.5203 7.4818 34 1 3.8639 -7.0585 9.5733 35 1 5.3042 -6.0789 11.5933 36 1 5.6144 -1.2017 7.6058 37 1 4.4713 -2.0180 8.7573 38 1 1.1428 -2.6265 0.6746 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945880_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:00:27 Heat of formation + Delta-G solvation = 146.775902 kcal Electronic energy + Delta-G solvation = -21709.762932 eV Core-core repulsion = 18364.461449 eV Total energy + Delta-G solvation = -3345.301483 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 288.133 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.43726 -42.00900 -40.10088 -38.19823 -36.69138 -34.67607 -33.17350 -32.02896 -30.97997 -28.92328 -27.09911 -26.33713 -25.86960 -24.35752 -22.92720 -22.31661 -21.68453 -20.47494 -19.34768 -18.75773 -18.47361 -17.97994 -16.89291 -16.61211 -16.54119 -16.05841 -15.83766 -15.60174 -15.38676 -15.31043 -14.88314 -14.55327 -14.50070 -14.02070 -13.93864 -13.74251 -13.40866 -13.32690 -13.13174 -12.27331 -12.24805 -11.90480 -11.82840 -11.80182 -11.68940 -11.50311 -11.24566 -10.72023 -10.31492 -9.99442 -9.49778 -9.10129 -5.06705 0.08806 0.19458 0.96285 1.18096 1.47305 1.49695 1.78005 1.86522 1.97853 2.78987 3.01755 3.11333 3.16724 3.30301 3.40431 3.51424 3.63412 3.77831 3.83386 3.84766 3.96168 4.03744 4.12034 4.24539 4.35811 4.41985 4.45190 4.52686 4.62850 4.66044 4.73300 4.79147 4.81283 4.90702 5.00532 5.13926 5.21129 5.76065 5.76331 6.00186 6.10803 6.33499 6.41938 6.81481 7.30578 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.054 4.054 3 Si 0.676 3.324 4 C -0.246 4.246 5 C 0.201 3.799 6 N -0.562 5.562 7 C 0.566 3.434 8 N -0.696 5.696 9 C 0.148 3.852 10 C -0.129 4.129 11 H 0.100 0.900 12 C -0.138 4.138 13 C 0.134 3.866 14 H 0.113 0.887 15 N -0.356 5.356 16 C 0.052 3.948 17 C -0.273 4.273 18 C 0.045 3.955 19 N -0.294 5.294 20 C -0.134 4.134 21 N -0.569 5.569 22 C 0.224 3.776 23 H 0.381 0.619 24 H 0.078 0.922 25 H -0.257 1.257 26 H -0.252 1.252 27 H 0.167 0.833 28 H 0.414 0.586 29 H 0.075 0.925 30 H 0.072 0.928 31 H 0.081 0.919 32 H 0.111 0.889 33 H 0.171 0.829 34 H 0.148 0.852 35 H 0.184 0.816 36 H 0.107 0.893 37 H 0.081 0.919 38 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.639 0.605 -3.860 4.237 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.165 4.165 3 Si 0.577 3.423 4 C -0.254 4.254 5 C 0.034 3.966 6 N -0.284 5.284 7 C 0.209 3.791 8 N -0.332 5.332 9 C 0.024 3.976 10 C -0.148 4.148 11 H 0.118 0.882 12 C -0.176 4.176 13 C 0.031 3.969 14 H 0.131 0.869 15 N -0.138 5.138 16 C -0.094 4.094 17 C -0.303 4.303 18 C -0.141 4.141 19 N -0.114 5.114 20 C -0.173 4.173 21 N -0.291 5.291 22 C 0.056 3.944 23 H 0.230 0.770 24 H 0.096 0.904 25 H -0.182 1.182 26 H -0.177 1.177 27 H 0.184 0.816 28 H 0.252 0.748 29 H 0.093 0.907 30 H 0.090 0.910 31 H 0.100 0.900 32 H 0.129 0.871 33 H 0.188 0.812 34 H 0.166 0.834 35 H 0.201 0.799 36 H 0.126 0.874 37 H 0.100 0.900 38 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 2.844 1.803 -2.071 3.954 hybrid contribution -2.225 -0.823 -1.477 2.795 sum 0.619 0.980 -3.549 3.733 Atomic orbital electron populations 1.86593 1.17892 1.80108 1.49932 1.24406 0.84308 1.10556 0.97259 0.95267 0.91482 0.74718 0.80833 1.20605 1.07815 0.96873 1.00108 1.22768 0.88419 0.99267 0.86188 1.67942 1.27500 1.08233 1.24735 1.19378 0.87208 0.85551 0.86945 1.44105 1.58884 1.12110 1.18149 1.21327 0.96154 0.93757 0.86359 1.22970 0.97519 0.98477 0.95818 0.88222 1.23520 0.97483 1.02521 0.94081 1.22045 0.99282 0.86300 0.89273 0.86913 1.48397 1.35094 1.21901 1.08445 1.22483 0.95291 0.90945 1.00666 1.21564 1.09844 1.05624 0.93219 1.23967 0.95999 0.93744 1.00416 1.77415 1.23759 1.19807 0.90446 1.23368 0.98178 0.97494 0.98264 1.67974 1.16624 1.40102 1.04393 1.22800 0.88986 0.91049 0.91602 0.77049 0.90380 1.18170 1.17693 0.81643 0.74841 0.90726 0.90986 0.90009 0.87121 0.81218 0.83415 0.79888 0.87448 0.90020 0.81378 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.03 12.82 -35.23 -0.45 -0.48 16 2 C -0.05 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.68 -1.37 29.91 -169.99 -5.08 -6.46 16 4 C -0.25 -0.17 5.40 -104.36 -0.56 -0.74 16 5 C 0.20 0.20 9.92 -17.22 -0.17 0.03 16 6 N -0.56 -1.39 9.59 -13.93 -0.13 -1.52 16 7 C 0.57 1.40 8.43 -322.79 -2.72 -1.32 16 8 N -0.70 0.15 5.70 -62.31 -0.36 -0.21 16 9 C 0.15 -0.27 5.49 -4.04 -0.02 -0.29 16 10 C -0.13 0.39 3.33 -89.81 -0.30 0.10 16 11 H 0.10 -0.27 6.96 -51.93 -0.36 -0.63 16 12 C -0.14 0.47 6.88 -25.92 -0.18 0.29 16 13 C 0.13 -0.17 5.18 -67.11 -0.35 -0.52 16 14 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 15 N -0.36 -0.51 3.79 -54.07 -0.21 -0.72 16 16 C 0.05 0.02 9.62 -17.22 -0.17 -0.15 16 17 C -0.27 -0.28 10.80 -40.01 -0.43 -0.72 16 18 C 0.04 0.09 12.03 -17.36 -0.21 -0.11 16 19 N -0.29 -1.15 12.58 30.63 0.39 -0.76 16 20 C -0.13 0.31 7.44 -25.92 -0.19 0.12 16 21 N -0.57 -1.65 10.46 -13.93 -0.15 -1.80 16 22 C 0.22 0.33 10.99 -17.23 -0.19 0.14 16 23 H 0.38 -1.48 8.74 45.56 0.40 -1.08 16 24 H 0.08 -0.25 7.96 -51.93 -0.41 -0.67 16 25 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 26 H -0.25 -0.27 7.07 56.52 0.40 0.13 16 27 H 0.17 -0.22 5.04 -52.49 -0.26 -0.49 16 28 H 0.41 -0.59 8.59 -40.82 -0.35 -0.94 16 29 H 0.07 -0.13 7.84 -51.93 -0.41 -0.54 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.27 6.99 -51.93 -0.36 -0.63 16 32 H 0.11 -0.47 7.90 -51.93 -0.41 -0.88 16 33 H 0.17 -0.46 6.66 -52.49 -0.35 -0.80 16 34 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 35 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 36 H 0.11 -0.40 8.10 -51.93 -0.42 -0.82 16 37 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.17 -0.11 8.06 -52.48 -0.42 -0.53 16 LS Contribution 320.71 15.07 4.83 4.83 Total: 0.00 -8.96 320.71 -11.22 -20.19 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -4.68 Total: -10.08 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -5.39 Total: -3.00 kcal Atomic # 7 Polarization: -4.55 SS G_CDS: -0.45 Total: -5.01 kcal Atomic # 8 Polarization: -0.03 SS G_CDS: -0.45 Total: -0.48 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.08 Total: -6.46 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -8.96 -11.22 -20.19 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945880_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 166.965 kcal (2) G-P(sol) polarization free energy of solvation -8.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 158.000 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.189 kcal (6) G-S(sol) free energy of system = (1) + (5) 146.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds