Wall clock time and date at job start Mon Mar 8 2021 07:00:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33323 * 125.94829 * 2 1 4 4 C 1.50700 * 122.71367 * 0.04449 * 3 2 1 5 5 O 1.42903 * 109.46985 * 29.99834 * 4 3 2 6 6 Si 1.86304 * 109.47492 * 149.99616 * 4 3 2 7 7 N 1.32124 * 114.58053 * 180.02562 * 3 2 1 8 8 C 1.29683 * 116.86353 * 0.02562 * 7 3 2 9 9 N 1.38609 * 124.94818 * 179.97438 * 8 7 3 10 10 C 1.46507 * 120.00066 * 180.02562 * 9 8 7 11 11 C 1.52999 * 109.46856 * 179.97438 * 10 9 8 12 12 H 1.08998 * 112.84604 * 45.34353 * 11 10 9 13 13 C 1.53788 * 113.61024 * 176.52976 * 11 10 9 14 14 C 1.53780 * 87.07878 * 139.98316 * 13 11 10 15 15 H 1.08994 * 113.61695 * 220.01681 * 14 13 11 16 16 N 1.46500 * 113.61342 * 89.19900 * 14 13 11 17 17 C 1.34945 * 126.04219 * 274.71637 * 16 14 13 18 18 C 1.35320 * 107.75012 * 179.83608 * 17 16 14 19 19 C 1.39871 * 107.91579 * 0.42356 * 18 17 16 20 20 N 1.30833 * 108.20608 * 359.74092 * 19 18 17 21 21 C 1.53780 * 113.61721 * 274.13620 * 11 10 9 22 22 S 1.70968 * 110.10323 * 0.02562 * 8 7 3 23 23 H 1.09008 * 109.47054 * 179.97438 * 1 2 3 24 24 H 1.08994 * 109.47418 * 299.99420 * 1 2 3 25 25 H 1.09003 * 109.46961 * 60.00328 * 1 2 3 26 26 H 1.08999 * 109.47291 * 270.00091 * 4 3 2 27 27 H 0.96696 * 114.00144 * 179.97438 * 5 4 3 28 28 H 1.48496 * 109.99925 * 300.00641 * 6 4 3 29 29 H 1.48507 * 109.99451 * 61.31947 * 6 4 3 30 30 H 0.96995 * 120.00445 * 0.02816 * 9 8 7 31 31 H 1.08997 * 109.47383 * 300.00374 * 10 9 8 32 32 H 1.09005 * 109.46493 * 60.00392 * 10 9 8 33 33 H 1.08994 * 113.61594 * 254.53582 * 13 11 10 34 34 H 1.08997 * 113.61127 * 25.35412 * 13 11 10 35 35 H 1.08007 * 126.12370 * 359.97438 * 17 16 14 36 36 H 1.07995 * 126.03716 * 180.15748 * 18 17 16 37 37 H 1.08001 * 125.89460 * 179.75631 * 19 18 17 38 38 H 1.08997 * 113.61686 * 334.57561 * 21 11 10 39 39 H 1.08998 * 113.60935 * 105.47800 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 0.0010 5 8 0.4816 2.5018 0.6754 6 14 2.9327 3.6146 0.8791 7 7 3.5850 0.8189 -0.0005 8 6 3.9315 -0.4308 -0.0015 9 7 5.2385 -0.8924 -0.0027 10 6 5.5067 -2.3327 -0.0043 11 6 7.0181 -2.5700 -0.0060 12 1 7.5464 -1.9388 0.7086 13 6 7.4086 -4.0551 0.0775 14 6 8.5161 -3.7401 -0.9419 15 1 8.6486 -4.5156 -1.6962 16 7 9.7786 -3.3232 -0.3267 17 6 10.1002 -2.0692 0.0543 18 6 11.3472 -2.1044 0.5786 19 6 11.8071 -3.4234 0.5069 20 7 10.8677 -4.1548 -0.0357 21 6 7.6411 -2.5638 -1.4120 22 16 2.5413 -1.4260 -0.0025 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5137 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 1.6085 2.8219 -1.0264 27 1 0.0695 3.3756 0.7146 28 1 3.1224 3.1632 2.2810 29 1 4.2370 3.6285 0.1691 30 1 5.9755 -0.2619 -0.0024 31 1 5.0685 -2.7849 0.8854 32 1 5.0675 -2.7830 -0.8946 33 1 7.7870 -4.3527 1.0554 34 1 6.6421 -4.7301 -0.3031 35 1 9.4735 -1.1946 -0.0401 36 1 11.8926 -1.2620 0.9775 37 1 12.7710 -3.7769 0.8418 38 1 6.9390 -2.8303 -2.2019 39 1 8.2071 -1.6593 -1.6347 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945880_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:00:35 Heat of formation + Delta-G solvation = 132.886523 kcal Electronic energy + Delta-G solvation = -22231.520304 eV Core-core repulsion = 18884.657071 eV Total energy + Delta-G solvation = -3346.863233 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.110 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.49783 -40.99223 -40.20871 -37.88877 -36.64552 -33.18660 -32.24558 -31.05168 -29.80160 -28.29541 -27.19863 -25.60119 -24.77346 -24.03036 -22.46489 -21.83539 -20.63304 -20.16945 -19.30450 -18.18688 -18.08289 -17.35278 -16.95336 -16.74071 -16.15373 -15.82359 -15.73970 -15.50880 -15.35400 -14.87639 -14.65209 -14.11574 -14.07681 -13.96620 -13.87947 -13.68721 -13.48443 -13.32792 -13.16777 -12.97930 -12.45601 -12.05064 -11.96512 -11.91669 -11.68602 -11.56979 -11.09229 -10.62689 -10.38121 -10.35489 -9.96867 -9.56136 -8.62918 -4.82785 0.04398 0.15896 0.77539 0.89650 1.38020 1.39776 1.74233 1.88531 1.92244 1.94550 2.35666 2.89213 2.99907 3.13012 3.25241 3.35971 3.76202 3.78674 3.92571 3.96263 4.06139 4.14574 4.20151 4.29113 4.32219 4.38058 4.43278 4.43678 4.50679 4.61791 4.70071 4.83516 4.85938 4.89097 4.91676 5.08224 5.12039 5.38726 5.50315 5.70169 6.03701 6.18406 6.61981 6.75192 6.89808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.225 4.225 3 C 0.098 3.902 4 C -0.035 4.035 5 O -0.545 6.545 6 Si 0.712 3.288 7 N -0.549 5.549 8 C 0.316 3.684 9 N -0.695 5.695 10 C 0.133 3.867 11 C -0.125 4.125 12 H 0.103 0.897 13 C -0.134 4.134 14 C 0.136 3.864 15 H 0.114 0.886 16 N -0.357 5.357 17 C 0.051 3.949 18 C -0.272 4.272 19 C 0.046 3.954 20 N -0.293 5.293 21 C -0.138 4.138 22 S 0.103 5.897 23 H 0.056 0.944 24 H 0.090 0.910 25 H 0.073 0.927 26 H 0.080 0.920 27 H 0.385 0.615 28 H -0.264 1.264 29 H -0.253 1.253 30 H 0.411 0.589 31 H 0.072 0.928 32 H 0.074 0.926 33 H 0.083 0.917 34 H 0.107 0.893 35 H 0.170 0.830 36 H 0.149 0.851 37 H 0.185 0.815 38 H 0.111 0.889 39 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.410 1.909 -1.329 3.349 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.348 4.348 3 C -0.030 4.030 4 C -0.147 4.147 5 O -0.351 6.351 6 Si 0.612 3.388 7 N -0.276 5.276 8 C -0.055 4.055 9 N -0.336 5.336 10 C 0.009 3.991 11 C -0.144 4.144 12 H 0.121 0.879 13 C -0.173 4.173 14 C 0.033 3.967 15 H 0.132 0.868 16 N -0.140 5.140 17 C -0.095 4.095 18 C -0.301 4.301 19 C -0.140 4.140 20 N -0.113 5.113 21 C -0.177 4.177 22 S 0.351 5.649 23 H 0.075 0.925 24 H 0.108 0.892 25 H 0.091 0.909 26 H 0.098 0.902 27 H 0.233 0.767 28 H -0.189 1.189 29 H -0.177 1.177 30 H 0.249 0.751 31 H 0.090 0.910 32 H 0.092 0.908 33 H 0.102 0.898 34 H 0.126 0.874 35 H 0.187 0.813 36 H 0.166 0.834 37 H 0.202 0.798 38 H 0.129 0.871 39 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.697 -0.783 -1.293 2.273 hybrid contribution 0.386 1.328 0.008 1.383 sum -1.311 0.545 -1.286 1.915 Atomic orbital electron populations 1.20105 0.86167 1.01410 1.03937 1.25161 1.01538 0.92245 1.15868 1.18908 0.86409 0.95145 1.02587 1.23964 0.93054 0.96204 1.01478 1.86427 1.33946 1.35720 1.79003 0.96163 0.78879 0.84642 0.79104 1.65698 1.17248 1.16871 1.27802 1.23189 0.91875 0.91303 0.99126 1.43871 1.01728 1.07108 1.80925 1.21555 0.95685 0.79374 1.02506 1.22894 0.94361 0.98737 0.98359 0.87906 1.23378 0.97606 0.95443 1.00910 1.22040 0.79751 0.99048 0.95907 0.86800 1.48379 1.12475 1.05552 1.47557 1.22478 0.97798 0.89423 0.99764 1.21576 0.96952 0.98608 1.12987 1.23978 0.98977 0.92512 0.98547 1.77419 0.94941 1.17996 1.20981 1.23554 0.98400 0.98376 0.97338 1.83949 0.96461 1.10547 1.73898 0.92507 0.89162 0.90873 0.90207 0.76651 1.18888 1.17740 0.75094 0.90951 0.90819 0.89799 0.87424 0.81281 0.83367 0.79810 0.87084 0.89851 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.07 8.91 36.01 0.32 0.25 16 2 C -0.23 -0.74 6.50 -36.02 -0.23 -0.98 16 3 C 0.10 0.41 5.95 -84.18 -0.50 -0.09 16 4 C -0.03 -0.04 2.93 36.01 0.11 0.06 16 5 O -0.54 0.15 9.80 -35.23 -0.35 -0.19 16 6 Si 0.71 0.76 32.08 -169.99 -5.45 -4.70 16 7 N -0.55 -2.72 8.95 -11.36 -0.10 -2.83 16 8 C 0.32 0.90 8.24 -87.68 -0.72 0.18 16 9 N -0.69 0.12 5.71 -62.29 -0.36 -0.24 16 10 C 0.13 -0.35 5.36 -4.04 -0.02 -0.37 16 11 C -0.12 0.43 3.33 -89.80 -0.30 0.13 16 12 H 0.10 -0.30 7.00 -51.93 -0.36 -0.66 16 13 C -0.13 0.38 7.44 -25.92 -0.19 0.19 16 14 C 0.14 -0.21 5.19 -67.03 -0.35 -0.56 16 15 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 16 N -0.36 -0.44 3.79 -53.99 -0.20 -0.65 16 17 C 0.05 0.01 9.63 -17.22 -0.17 -0.15 16 18 C -0.27 -0.26 10.80 -40.01 -0.43 -0.70 16 19 C 0.05 0.09 12.02 -17.37 -0.21 -0.12 16 20 N -0.29 -1.09 12.58 30.62 0.39 -0.70 16 21 C -0.14 0.50 6.89 -25.83 -0.18 0.32 16 22 S 0.10 0.19 22.32 -107.50 -2.40 -2.21 16 23 H 0.06 0.02 8.14 -51.92 -0.42 -0.40 16 24 H 0.09 0.14 6.73 -51.93 -0.35 -0.21 16 25 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 26 H 0.08 -0.03 7.96 -51.93 -0.41 -0.44 16 27 H 0.39 -2.07 8.74 45.56 0.40 -1.68 16 28 H -0.26 -1.39 7.11 56.52 0.40 -0.99 16 29 H -0.25 -1.14 7.11 56.52 0.40 -0.74 16 30 H 0.41 -0.32 8.60 -40.82 -0.35 -0.67 16 31 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.24 7.87 -51.93 -0.41 -0.65 16 33 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 34 H 0.11 -0.48 8.10 -51.93 -0.42 -0.90 16 35 H 0.17 -0.44 6.67 -52.48 -0.35 -0.79 16 36 H 0.15 -0.12 8.06 -52.49 -0.42 -0.55 16 37 H 0.19 -0.14 8.06 -52.49 -0.42 -0.56 16 38 H 0.11 -0.50 7.92 -51.93 -0.41 -0.92 16 39 H 0.08 -0.28 6.96 -51.93 -0.36 -0.64 16 LS Contribution 336.03 15.07 5.06 5.06 Total: 0.00 -9.67 336.03 -11.48 -21.15 By element: Atomic # 1 Polarization: -7.68 SS G_CDS: -5.19 Total: -12.87 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -2.88 Total: -1.84 kcal Atomic # 7 Polarization: -4.14 SS G_CDS: -0.28 Total: -4.42 kcal Atomic # 8 Polarization: 0.15 SS G_CDS: -0.35 Total: -0.19 kcal Atomic # 14 Polarization: 0.76 SS G_CDS: -5.45 Total: -4.70 kcal Atomic # 16 Polarization: 0.19 SS G_CDS: -2.40 Total: -2.21 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -9.67 -11.48 -21.15 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945880_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 154.039 kcal (2) G-P(sol) polarization free energy of solvation -9.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 144.365 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.478 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.153 kcal (6) G-S(sol) free energy of system = (1) + (5) 132.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds