Wall clock time and date at job start Mon Mar 8 2021 07:00:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47018 * 2 1 4 4 C 1.50699 * 109.47450 * 120.00095 * 2 1 3 5 5 C 1.37980 * 120.32777 * 245.02380 * 4 2 1 6 6 N 1.32005 * 120.90321 * 179.71727 * 5 4 2 7 7 C 1.32336 * 121.64243 * 0.52938 * 6 5 4 8 8 N 1.39152 * 119.71911 * 179.75004 * 7 6 5 9 9 C 1.46504 * 119.99681 * 359.72559 * 8 7 6 10 10 C 1.52995 * 109.46766 * 179.97438 * 9 8 7 11 11 H 1.08995 * 112.85412 * 43.80511 * 10 9 8 12 12 C 1.53785 * 113.61100 * 175.00257 * 10 9 8 13 13 C 1.53781 * 87.08277 * 140.06519 * 12 10 9 14 14 H 1.09002 * 113.61228 * 220.01683 * 13 12 10 15 15 N 1.46500 * 113.61711 * 89.19510 * 13 12 10 16 16 C 1.34948 * 126.04121 * 276.24807 * 15 13 12 17 17 C 1.35313 * 107.74870 * 179.84046 * 16 15 13 18 18 C 1.39872 * 107.91990 * 0.41922 * 17 16 15 19 19 N 1.30840 * 108.20152 * 359.74151 * 18 17 16 20 20 C 1.53776 * 113.69177 * 272.53131 * 10 9 8 21 21 C 1.39349 * 120.56615 * 359.47256 * 7 6 5 22 22 F 1.35101 * 120.47192 * 180.27841 * 21 7 6 23 23 C 1.38439 * 119.05054 * 0.25755 * 21 7 6 24 24 H 0.96701 * 114.00388 * 299.99883 * 1 2 3 25 25 H 1.09009 * 109.47269 * 240.00094 * 2 1 3 26 26 H 1.48505 * 110.00139 * 178.68320 * 3 2 1 27 27 H 1.48500 * 110.00341 * 300.00093 * 3 2 1 28 28 H 1.08008 * 119.55049 * 359.97438 * 5 4 2 29 29 H 0.97000 * 120.00114 * 179.72387 * 8 7 6 30 30 H 1.08993 * 109.47068 * 60.00020 * 9 8 7 31 31 H 1.08997 * 109.46834 * 299.99884 * 9 8 7 32 32 H 1.08993 * 113.61827 * 25.50878 * 12 10 9 33 33 H 1.09006 * 113.68471 * 254.62104 * 12 10 9 34 34 H 1.08000 * 126.12316 * 359.97438 * 16 15 13 35 35 H 1.07997 * 126.04317 * 180.15988 * 17 16 15 36 36 H 1.07996 * 125.90222 * 179.75568 * 18 17 16 37 37 H 1.09003 * 113.61687 * 105.46026 * 20 10 9 38 38 H 1.09009 * 113.61565 * 334.56374 * 20 10 9 39 39 H 1.08004 * 120.75090 * 180.02562 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6378 -0.0201 2.1939 6 7 3.0783 -0.6298 3.2787 7 6 2.8718 -1.9211 3.4816 8 7 3.3586 -2.5243 4.6372 9 6 4.1015 -1.7315 5.6201 10 6 4.5200 -2.6281 6.7870 11 1 4.9103 -3.5922 6.4613 12 6 5.4126 -1.9190 7.8192 13 6 4.6183 -2.6668 8.9031 14 1 4.3984 -2.0590 9.7808 15 7 5.1801 -3.9761 9.2442 16 6 4.9597 -5.1315 8.5825 17 6 5.6595 -6.1055 9.2089 18 6 6.3230 -5.5275 10.2962 19 7 6.0363 -4.2511 10.3183 20 6 3.4591 -2.7355 7.8950 21 6 2.1660 -2.6807 2.5507 22 9 1.9514 -3.9977 2.7624 23 6 1.6875 -2.0665 1.4060 24 1 -0.3934 0.4417 0.7650 25 1 1.7923 -0.5139 -0.8901 26 1 3.5346 1.7703 0.0321 27 1 1.5614 2.4680 -1.2085 28 1 2.8293 1.0345 2.0607 29 1 3.2062 -3.4696 4.7920 30 1 3.4679 -0.9257 5.9905 31 1 4.9892 -1.3088 5.1496 32 1 5.2760 -0.8380 7.8454 33 1 6.4612 -2.2120 7.7661 34 1 4.3381 -5.2558 7.7082 35 1 5.6958 -7.1463 8.9227 36 1 6.9617 -6.0453 10.9964 37 1 2.9301 -3.6886 7.9022 38 1 2.7882 -1.8776 7.9419 39 1 1.1367 -2.6290 0.6666 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16945880_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:00:38 Heat of formation + Delta-G solvation = 82.662277 kcal Electronic energy + Delta-G solvation = -24029.525460 eV Core-core repulsion = 20277.415738 eV Total energy + Delta-G solvation = -3752.109723 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.128 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -49.91213 -42.44965 -41.44258 -40.10430 -38.16372 -36.55480 -33.37926 -32.74265 -31.54988 -30.98230 -28.81114 -27.12127 -26.34646 -25.34122 -23.95728 -22.92564 -22.33250 -21.69953 -20.50227 -19.38535 -18.54786 -18.35799 -17.99910 -17.61662 -17.07368 -16.70335 -16.40257 -16.14070 -15.99192 -15.64756 -15.49706 -15.40904 -15.26191 -14.62008 -14.41051 -14.34812 -14.03847 -13.96713 -13.72579 -13.54407 -13.43130 -13.12537 -12.64952 -12.26232 -12.13304 -11.89130 -11.83568 -11.52810 -11.31294 -10.75148 -10.71511 -10.50083 -10.33761 -9.52130 -8.82287 -5.12340 -0.11410 0.08075 0.93805 1.19149 1.44881 1.55587 1.86770 1.90898 1.95579 2.51477 2.96417 3.03116 3.10882 3.21011 3.37258 3.39578 3.51911 3.55258 3.79263 3.80325 3.92232 3.96994 4.01313 4.21965 4.32990 4.36008 4.38741 4.44431 4.50123 4.60424 4.63983 4.65647 4.72609 4.78835 4.88334 4.93531 4.98483 5.11641 5.30377 5.73827 5.85847 6.07986 6.08897 6.49067 6.79221 6.89114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.684 3.316 4 C -0.210 4.210 5 C 0.149 3.851 6 N -0.512 5.512 7 C 0.390 3.610 8 N -0.717 5.717 9 C 0.144 3.856 10 C -0.130 4.130 11 H 0.098 0.902 12 C -0.134 4.134 13 C 0.134 3.866 14 H 0.113 0.887 15 N -0.356 5.356 16 C 0.052 3.948 17 C -0.273 4.273 18 C 0.045 3.955 19 N -0.293 5.293 20 C -0.138 4.138 21 C -0.020 4.020 22 F -0.134 7.134 23 C -0.038 4.038 24 H 0.380 0.620 25 H 0.115 0.885 26 H -0.254 1.254 27 H -0.251 1.251 28 H 0.163 0.837 29 H 0.412 0.588 30 H 0.074 0.926 31 H 0.071 0.929 32 H 0.107 0.893 33 H 0.081 0.919 34 H 0.170 0.830 35 H 0.148 0.852 36 H 0.184 0.816 37 H 0.081 0.919 38 H 0.110 0.890 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.503 1.834 0.430 2.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.167 4.167 3 Si 0.586 3.414 4 C -0.215 4.215 5 C -0.008 4.008 6 N -0.229 5.229 7 C 0.151 3.849 8 N -0.351 5.351 9 C 0.021 3.979 10 C -0.149 4.149 11 H 0.117 0.883 12 C -0.173 4.173 13 C 0.031 3.969 14 H 0.131 0.869 15 N -0.138 5.138 16 C -0.094 4.094 17 C -0.302 4.302 18 C -0.141 4.141 19 N -0.114 5.114 20 C -0.176 4.176 21 C -0.047 4.047 22 F -0.113 7.113 23 C -0.064 4.064 24 H 0.227 0.773 25 H 0.133 0.867 26 H -0.178 1.178 27 H -0.176 1.176 28 H 0.180 0.820 29 H 0.249 0.751 30 H 0.092 0.908 31 H 0.089 0.911 32 H 0.125 0.875 33 H 0.099 0.901 34 H 0.187 0.813 35 H 0.166 0.834 36 H 0.201 0.799 37 H 0.099 0.901 38 H 0.129 0.871 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -0.238 3.907 0.809 3.997 hybrid contribution -0.559 -2.679 -1.161 2.973 sum -0.797 1.229 -0.353 1.506 Atomic orbital electron populations 1.86517 1.17052 1.81673 1.49292 1.24861 0.85242 1.09928 0.96625 0.94901 0.81168 0.77557 0.87821 1.20933 1.05701 0.94652 1.00215 1.22313 0.91687 0.99233 0.87551 1.67290 1.25015 1.07256 1.23372 1.18418 0.90566 0.88951 0.86934 1.44536 1.59590 1.12141 1.18807 1.21307 0.96116 0.93196 0.87300 1.22971 0.97431 1.00413 0.94044 0.88346 1.23366 0.99848 1.00794 0.93284 1.22037 0.94729 0.81609 0.98543 0.86906 1.48390 1.37046 1.06639 1.21752 1.22472 1.01407 0.86210 0.99325 1.21567 1.06911 1.00844 1.00906 1.23971 0.99984 0.91468 0.98682 1.77417 1.10565 1.17117 1.06293 1.23524 0.95946 1.04560 0.93616 1.18003 1.08655 0.79543 0.98456 1.91493 1.93649 1.31217 1.94902 1.21289 0.95538 0.94452 0.95101 0.77297 0.86735 1.17848 1.17580 0.82008 0.75119 0.90819 0.91051 0.87453 0.90051 0.81282 0.83408 0.79865 0.90084 0.87130 0.83321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.46 12.84 -35.23 -0.45 0.00 16 2 C -0.05 0.08 2.82 36.01 0.10 0.18 16 3 Si 0.68 -1.55 29.83 -169.99 -5.07 -6.62 16 4 C -0.21 0.15 5.36 -104.47 -0.56 -0.41 16 5 C 0.15 -0.10 9.83 -17.57 -0.17 -0.28 16 6 N -0.51 -0.43 9.57 -12.36 -0.12 -0.55 16 7 C 0.39 0.29 7.49 -154.85 -1.16 -0.87 16 8 N -0.72 0.87 5.71 -60.34 -0.34 0.52 16 9 C 0.14 -0.34 5.54 -4.04 -0.02 -0.36 16 10 C -0.13 0.43 3.32 -89.81 -0.30 0.14 16 11 H 0.10 -0.29 6.89 -51.93 -0.36 -0.65 16 12 C -0.13 0.34 7.44 -25.92 -0.19 0.15 16 13 C 0.13 -0.19 5.18 -67.12 -0.35 -0.54 16 14 H 0.11 -0.16 8.14 -51.93 -0.42 -0.59 16 15 N -0.36 -0.46 3.80 -54.07 -0.21 -0.67 16 16 C 0.05 0.01 9.62 -17.22 -0.17 -0.16 16 17 C -0.27 -0.24 10.80 -40.01 -0.43 -0.68 16 18 C 0.05 0.09 12.03 -17.36 -0.21 -0.12 16 19 N -0.29 -1.11 12.58 30.62 0.39 -0.72 16 20 C -0.14 0.49 6.88 -25.92 -0.18 0.31 16 21 C -0.02 -0.02 7.35 -39.09 -0.29 -0.31 16 22 F -0.13 -0.21 16.65 2.25 0.04 -0.18 16 23 C -0.04 -0.01 9.82 -39.26 -0.39 -0.39 16 24 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 25 H 0.12 -0.12 7.96 -51.92 -0.41 -0.54 16 26 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 27 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 28 H 0.16 -0.51 4.91 -52.48 -0.26 -0.76 16 29 H 0.41 -0.92 7.94 -40.82 -0.32 -1.25 16 30 H 0.07 -0.17 7.85 -51.93 -0.41 -0.58 16 31 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 32 H 0.11 -0.42 8.10 -51.93 -0.42 -0.84 16 33 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 34 H 0.17 -0.47 6.63 -52.49 -0.35 -0.82 16 35 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 36 H 0.18 -0.14 8.06 -52.49 -0.42 -0.56 16 37 H 0.08 -0.28 7.04 -51.93 -0.37 -0.64 16 38 H 0.11 -0.49 7.90 -51.92 -0.41 -0.90 16 39 H 0.15 -0.08 8.06 -52.48 -0.42 -0.50 16 LS Contribution 331.19 15.07 4.99 4.99 Total: 0.00 -7.90 331.19 -9.73 -17.63 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -4.64 Total: -11.07 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -4.31 Total: -3.33 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -0.28 Total: -1.42 kcal Atomic # 8 Polarization: 0.46 SS G_CDS: -0.45 Total: 0.00 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.04 Total: -0.18 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.07 Total: -6.62 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -7.90 -9.73 -17.63 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16945880_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.294 kcal (2) G-P(sol) polarization free energy of solvation -7.901 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.731 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.632 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.662 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds