Wall clock time and date at job start Mon Mar 8 2021 08:10:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46927 * 2 1 4 4 C 1.50703 * 109.47171 * 119.99815 * 2 1 3 5 5 C 1.38609 * 120.71771 * 244.72397 * 4 2 1 6 6 N 1.32282 * 119.19215 * 179.71706 * 5 4 2 7 7 C 1.32496 * 120.73916 * 0.56707 * 6 5 4 8 8 N 1.38409 * 119.21256 * 179.72908 * 7 6 5 9 9 C 1.46495 * 119.99916 * 359.97438 * 8 7 6 10 10 H 1.09001 * 112.85527 * 23.80706 * 9 8 7 11 11 C 1.53784 * 113.61365 * 155.00293 * 9 8 7 12 12 C 1.53780 * 87.08207 * 89.11349 * 11 9 8 13 13 H 1.08999 * 113.61614 * 270.79937 * 12 11 9 14 14 C 1.50702 * 113.61303 * 139.98591 * 12 11 9 15 15 N 1.30493 * 125.65074 * 95.02368 * 14 12 11 16 16 C 1.34129 * 109.25428 * 179.97438 * 15 14 12 17 17 C 1.34666 * 108.02186 * 0.02562 * 16 15 14 18 18 N 1.35047 * 125.64373 * 274.71854 * 14 12 11 19 19 C 1.53781 * 113.61478 * 252.49712 * 9 8 7 20 20 N 1.32488 * 121.56738 * 359.70653 * 7 6 5 21 21 C 1.32275 * 120.74087 * 359.97438 * 20 7 6 22 22 H 0.96698 * 113.99898 * 299.99797 * 1 2 3 23 23 H 1.09002 * 109.47259 * 239.99966 * 2 1 3 24 24 H 1.48504 * 109.99730 * 299.99986 * 3 2 1 25 25 H 1.48495 * 110.00156 * 61.31576 * 3 2 1 26 26 H 1.07998 * 120.40407 * 359.97438 * 5 4 2 27 27 H 0.97003 * 119.99601 * 179.97438 * 8 7 6 28 28 H 1.09001 * 113.61878 * 203.66678 * 11 9 8 29 29 H 1.09002 * 113.61264 * 334.56522 * 11 9 8 30 30 H 1.08003 * 125.98849 * 180.02562 * 16 15 14 31 31 H 1.08001 * 126.59673 * 179.97438 * 17 16 15 32 32 H 0.96993 * 126.39988 * 359.97438 * 18 14 12 33 33 H 1.08997 * 113.61577 * 25.43246 * 19 9 8 34 34 H 1.08998 * 113.61875 * 156.33993 * 19 9 8 35 35 H 1.08004 * 120.40113 * 179.97438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6470 -0.0261 2.2005 6 7 3.0688 -0.6783 3.2713 7 6 2.8236 -1.9723 3.4164 8 7 3.2846 -2.6245 4.5468 9 6 4.0342 -1.8846 5.5649 10 1 3.8225 -0.8154 5.5529 11 6 3.9545 -2.5125 6.9664 12 6 5.1918 -3.3399 6.5802 13 1 4.9505 -4.2890 6.1016 14 6 6.1931 -3.4858 7.6971 15 7 6.2653 -4.4898 8.5275 16 6 7.2752 -4.2824 9.3855 17 6 7.8503 -3.1049 9.0753 18 7 7.1679 -2.6018 8.0006 19 6 5.5355 -2.2169 5.5875 20 7 2.1474 -2.6565 2.5054 21 6 1.6922 -2.0632 1.4144 22 1 -0.3933 0.4417 0.7651 23 1 1.7923 -0.5138 -0.8900 24 1 1.5613 2.4679 -1.2085 25 1 1.5878 2.4586 1.2241 26 1 2.8542 1.0275 2.0854 27 1 3.1112 -3.5716 4.6648 28 1 4.1378 -1.8035 7.7738 29 1 3.0593 -3.1139 7.1251 30 1 7.5747 -4.9439 10.1850 31 1 8.6910 -2.6474 9.5755 32 1 7.3494 -1.7657 7.5436 33 1 5.9168 -2.5796 4.6329 34 1 6.1512 -1.4271 6.0178 35 1 1.1420 -2.6263 0.6751 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16969812_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:10:34 Heat of formation + Delta-G solvation = 123.476867 kcal Electronic energy + Delta-G solvation = -20084.079537 eV Core-core repulsion = 16893.305352 eV Total energy + Delta-G solvation = -3190.774186 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -43.09069 -42.14345 -40.29424 -38.17154 -35.57266 -34.72351 -33.41448 -32.25897 -30.45642 -27.07756 -26.94040 -26.18069 -25.48885 -23.34761 -22.54350 -21.73265 -20.62574 -19.76902 -19.03225 -18.45318 -18.12683 -16.71860 -16.63874 -16.29078 -16.09739 -15.99501 -15.67162 -15.41200 -15.23461 -14.65423 -14.60558 -14.50795 -14.02454 -13.85804 -13.60218 -13.20217 -12.55170 -12.26939 -12.17826 -11.89009 -11.76481 -11.61835 -11.32674 -10.94977 -10.94674 -10.74890 -10.05657 -9.33295 -9.19002 -5.06558 0.01788 0.12511 1.08635 1.18116 1.48007 1.67453 1.88191 2.12755 2.20200 2.75921 3.05635 3.21822 3.28279 3.29752 3.47811 3.58257 3.66690 3.67071 3.69768 3.99675 4.12247 4.14794 4.40835 4.45825 4.49301 4.50836 4.59788 4.63805 4.74658 4.75272 4.84429 4.97542 5.15753 5.24644 5.73323 5.81694 5.95764 6.31231 6.34398 6.38154 7.17135 7.24540 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.053 4.053 3 Si 0.679 3.321 4 C -0.291 4.291 5 C 0.197 3.803 6 N -0.561 5.561 7 C 0.570 3.430 8 N -0.678 5.678 9 C 0.141 3.859 10 H 0.114 0.886 11 C -0.134 4.134 12 C -0.026 4.026 13 H 0.119 0.881 14 C 0.218 3.782 15 N -0.487 5.487 16 C -0.027 4.027 17 C -0.056 4.056 18 N -0.565 5.565 19 C -0.150 4.150 20 N -0.567 5.567 21 C 0.224 3.776 22 H 0.376 0.624 23 H 0.120 0.880 24 H -0.253 1.253 25 H -0.257 1.257 26 H 0.167 0.833 27 H 0.417 0.583 28 H 0.098 0.902 29 H 0.085 0.915 30 H 0.171 0.829 31 H 0.178 0.822 32 H 0.418 0.582 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.126 3.808 -0.458 4.948 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.165 4.165 3 Si 0.580 3.420 4 C -0.299 4.299 5 C 0.030 3.970 6 N -0.283 5.283 7 C 0.214 3.786 8 N -0.313 5.313 9 C 0.034 3.966 10 H 0.132 0.868 11 C -0.173 4.173 12 C -0.046 4.046 13 H 0.137 0.863 14 C -0.046 4.046 15 N -0.207 5.207 16 C -0.175 4.175 17 C -0.190 4.190 18 N -0.169 5.169 19 C -0.190 4.190 20 N -0.289 5.289 21 C 0.056 3.944 22 H 0.224 0.776 23 H 0.138 0.862 24 H -0.178 1.178 25 H -0.182 1.182 26 H 0.184 0.816 27 H 0.255 0.745 28 H 0.117 0.883 29 H 0.104 0.896 30 H 0.188 0.812 31 H 0.195 0.805 32 H 0.256 0.744 33 H 0.101 0.899 34 H 0.106 0.894 35 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 2.942 3.213 0.023 4.356 hybrid contribution -0.596 0.894 -0.194 1.091 sum 2.346 4.107 -0.171 4.733 Atomic orbital electron populations 1.86618 1.17732 1.79858 1.49335 1.24679 0.83786 1.10559 0.97450 0.95209 0.91461 0.74554 0.80747 1.21663 1.08901 0.97753 1.01576 1.22846 0.88147 0.99435 0.86596 1.67916 1.27172 1.08224 1.25002 1.19337 0.86937 0.85511 0.86844 1.43794 1.57976 1.11962 1.17617 1.21749 0.90455 0.97761 0.86603 0.86781 1.23437 0.98096 0.99304 0.96486 1.21083 0.92342 0.99909 0.91259 0.86321 1.22939 0.93755 0.87961 0.99935 1.70248 1.20261 1.24065 1.06081 1.22421 0.96100 0.97137 1.01859 1.22822 1.02813 0.99066 0.94287 1.43262 1.26362 1.20773 1.26510 1.23555 0.97659 0.97760 0.99988 1.67981 1.16460 1.40018 1.04411 1.22860 0.89069 0.90962 0.91497 0.77647 0.86187 1.17757 1.18240 0.81633 0.74469 0.88306 0.89597 0.81185 0.80465 0.74405 0.89852 0.89409 0.81191 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.07 12.85 -35.23 -0.45 -0.38 16 2 C -0.05 0.09 2.83 36.01 0.10 0.19 16 3 Si 0.68 -1.61 29.94 -169.99 -5.09 -6.70 16 4 C -0.29 0.22 5.36 -104.35 -0.56 -0.34 16 5 C 0.20 -0.09 9.92 -17.22 -0.17 -0.26 16 6 N -0.56 -0.70 9.13 -13.93 -0.13 -0.83 16 7 C 0.57 0.93 8.43 -322.81 -2.72 -1.79 16 8 N -0.68 0.31 5.41 -55.00 -0.30 0.02 16 9 C 0.14 -0.26 4.33 -67.12 -0.29 -0.55 16 10 H 0.11 -0.14 7.37 -51.93 -0.38 -0.52 16 11 C -0.13 0.27 7.38 -25.92 -0.19 0.08 16 12 C -0.03 0.03 4.17 -90.96 -0.38 -0.35 16 13 H 0.12 -0.11 8.14 -51.93 -0.42 -0.54 16 14 C 0.22 0.28 7.36 -155.42 -1.14 -0.87 16 15 N -0.49 -2.04 11.25 -10.82 -0.12 -2.16 16 16 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 17 C -0.06 0.01 12.04 -16.56 -0.20 -0.19 16 18 N -0.57 0.46 5.94 -10.23 -0.06 0.39 16 19 C -0.15 0.38 7.35 -25.92 -0.19 0.19 16 20 N -0.57 -1.20 10.46 -13.93 -0.15 -1.34 16 21 C 0.22 0.10 10.99 -17.23 -0.19 -0.09 16 22 H 0.38 -1.01 8.70 45.56 0.40 -0.62 16 23 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 24 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 25 H -0.26 0.15 7.03 56.52 0.40 0.55 16 26 H 0.17 -0.46 5.01 -52.49 -0.26 -0.72 16 27 H 0.42 -0.52 8.82 -40.82 -0.36 -0.88 16 28 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 29 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.17 0.06 8.06 -52.48 -0.42 -0.36 16 31 H 0.18 -0.57 8.06 -52.49 -0.42 -0.99 16 32 H 0.42 -1.56 7.53 -40.82 -0.31 -1.87 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.09 -0.35 6.64 -51.93 -0.34 -0.70 16 35 H 0.17 -0.22 8.06 -52.48 -0.42 -0.64 16 LS Contribution 299.86 15.07 4.52 4.52 Total: 0.00 -8.65 299.86 -11.75 -20.40 By element: Atomic # 1 Polarization: -5.84 SS G_CDS: -3.83 Total: -9.68 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -6.14 Total: -4.25 kcal Atomic # 7 Polarization: -3.17 SS G_CDS: -0.75 Total: -3.92 kcal Atomic # 8 Polarization: 0.07 SS G_CDS: -0.45 Total: -0.38 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.09 Total: -6.70 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -8.65 -11.75 -20.40 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16969812_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 143.881 kcal (2) G-P(sol) polarization free energy of solvation -8.650 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.404 kcal (6) G-S(sol) free energy of system = (1) + (5) 123.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds