Wall clock time and date at job start Mon Mar 8 2021 08:10:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46927 * 2 1 4 4 C 1.50703 * 109.47171 * 119.99815 * 2 1 3 5 5 C 1.38609 * 120.71771 * 244.72397 * 4 2 1 6 6 N 1.32282 * 119.19215 * 179.71706 * 5 4 2 7 7 C 1.32496 * 120.73916 * 0.56707 * 6 5 4 8 8 N 1.38409 * 119.21256 * 179.72908 * 7 6 5 9 9 C 1.46495 * 119.99916 * 359.97438 * 8 7 6 10 10 H 1.09001 * 112.85527 * 23.80706 * 9 8 7 11 11 C 1.53784 * 113.61365 * 155.00293 * 9 8 7 12 12 C 1.53780 * 87.08207 * 89.11349 * 11 9 8 13 13 H 1.08999 * 113.61614 * 270.79937 * 12 11 9 14 14 C 1.50702 * 113.61303 * 139.98591 * 12 11 9 15 15 N 1.30493 * 125.65074 * 95.02368 * 14 12 11 16 16 C 1.34129 * 109.25428 * 179.97438 * 15 14 12 17 17 C 1.34666 * 108.02186 * 0.02562 * 16 15 14 18 18 N 1.35047 * 125.64373 * 274.71854 * 14 12 11 19 19 C 1.53781 * 113.61478 * 252.49712 * 9 8 7 20 20 N 1.32488 * 121.56738 * 359.70653 * 7 6 5 21 21 C 1.32275 * 120.74087 * 359.97438 * 20 7 6 22 22 H 0.96698 * 113.99898 * 299.99797 * 1 2 3 23 23 H 1.09002 * 109.47259 * 239.99966 * 2 1 3 24 24 H 1.48504 * 109.99730 * 299.99986 * 3 2 1 25 25 H 1.48495 * 110.00156 * 61.31576 * 3 2 1 26 26 H 1.07998 * 120.40407 * 359.97438 * 5 4 2 27 27 H 0.97003 * 119.99601 * 179.97438 * 8 7 6 28 28 H 1.09001 * 113.61878 * 203.66678 * 11 9 8 29 29 H 1.09002 * 113.61264 * 334.56522 * 11 9 8 30 30 H 1.08003 * 125.98849 * 180.02562 * 16 15 14 31 31 H 1.08001 * 126.59673 * 179.97438 * 17 16 15 32 32 H 0.96993 * 126.39988 * 359.97438 * 18 14 12 33 33 H 1.08997 * 113.61577 * 25.43246 * 19 9 8 34 34 H 1.08998 * 113.61875 * 156.33993 * 19 9 8 35 35 H 1.08004 * 120.40113 * 179.97438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6470 -0.0261 2.2005 6 7 3.0688 -0.6783 3.2713 7 6 2.8236 -1.9723 3.4164 8 7 3.2846 -2.6245 4.5468 9 6 4.0342 -1.8846 5.5649 10 1 3.8225 -0.8154 5.5529 11 6 3.9545 -2.5125 6.9664 12 6 5.1918 -3.3399 6.5802 13 1 4.9505 -4.2890 6.1016 14 6 6.1931 -3.4858 7.6971 15 7 6.2653 -4.4898 8.5275 16 6 7.2752 -4.2824 9.3855 17 6 7.8503 -3.1049 9.0753 18 7 7.1679 -2.6018 8.0006 19 6 5.5355 -2.2169 5.5875 20 7 2.1474 -2.6565 2.5054 21 6 1.6922 -2.0632 1.4144 22 1 -0.3933 0.4417 0.7651 23 1 1.7923 -0.5138 -0.8900 24 1 1.5613 2.4679 -1.2085 25 1 1.5878 2.4586 1.2241 26 1 2.8542 1.0275 2.0854 27 1 3.1112 -3.5716 4.6648 28 1 4.1378 -1.8035 7.7738 29 1 3.0593 -3.1139 7.1251 30 1 7.5747 -4.9439 10.1850 31 1 8.6910 -2.6474 9.5755 32 1 7.3494 -1.7657 7.5436 33 1 5.9168 -2.5796 4.6329 34 1 6.1512 -1.4271 6.0178 35 1 1.1420 -2.6263 0.6751 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16969812_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:10:34 Heat of formation + Delta-G solvation = 124.110113 kcal Electronic energy + Delta-G solvation = -20084.052078 eV Core-core repulsion = 16893.305352 eV Total energy + Delta-G solvation = -3190.746726 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -43.09408 -42.12352 -40.19535 -38.10556 -35.51783 -34.72862 -33.45662 -32.21776 -30.44320 -27.00294 -26.80095 -26.11934 -25.45245 -23.30636 -22.54060 -21.74811 -20.55023 -19.70540 -18.98953 -18.39372 -18.07740 -16.62381 -16.58644 -16.22160 -16.07304 -15.95364 -15.62868 -15.33819 -15.21554 -14.60552 -14.58416 -14.45224 -14.00324 -13.73363 -13.45468 -13.16277 -12.45414 -12.25783 -12.07219 -11.91312 -11.71704 -11.50231 -11.24265 -11.03695 -11.01166 -10.67826 -10.05159 -9.34760 -9.13982 -4.89681 0.04250 0.13743 1.09792 1.33047 1.61328 1.74617 1.99966 2.12260 2.22312 2.76796 3.12929 3.31354 3.39900 3.43963 3.59394 3.67263 3.71346 3.78492 3.80609 4.11528 4.22580 4.25641 4.53106 4.57218 4.62091 4.65026 4.66088 4.73643 4.82342 4.90012 4.96902 5.05627 5.15655 5.33149 5.77505 5.79229 6.02270 6.37597 6.50308 6.50375 7.14205 7.25453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.058 4.058 3 Si 0.762 3.238 4 C -0.283 4.283 5 C 0.193 3.807 6 N -0.572 5.572 7 C 0.556 3.444 8 N -0.676 5.676 9 C 0.144 3.856 10 H 0.112 0.888 11 C -0.125 4.125 12 C -0.027 4.027 13 H 0.111 0.889 14 C 0.211 3.789 15 N -0.535 5.535 16 C -0.065 4.065 17 C -0.042 4.042 18 N -0.555 5.555 19 C -0.136 4.136 20 N -0.591 5.591 21 C 0.213 3.787 22 H 0.385 0.615 23 H 0.131 0.869 24 H -0.302 1.302 25 H -0.277 1.277 26 H 0.188 0.812 27 H 0.418 0.582 28 H 0.104 0.896 29 H 0.081 0.919 30 H 0.176 0.824 31 H 0.210 0.790 32 H 0.432 0.568 33 H 0.076 0.924 34 H 0.107 0.893 35 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.884 4.996 -0.564 6.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.168 4.168 3 Si 0.667 3.333 4 C -0.291 4.291 5 C 0.026 3.974 6 N -0.295 5.295 7 C 0.199 3.801 8 N -0.312 5.312 9 C 0.038 3.962 10 H 0.130 0.870 11 C -0.165 4.165 12 C -0.047 4.047 13 H 0.129 0.871 14 C -0.054 4.054 15 N -0.256 5.256 16 C -0.212 4.212 17 C -0.177 4.177 18 N -0.160 5.160 19 C -0.176 4.176 20 N -0.313 5.313 21 C 0.046 3.954 22 H 0.234 0.766 23 H 0.149 0.851 24 H -0.230 1.230 25 H -0.204 1.204 26 H 0.204 0.796 27 H 0.257 0.743 28 H 0.122 0.878 29 H 0.099 0.901 30 H 0.193 0.807 31 H 0.227 0.773 32 H 0.274 0.726 33 H 0.095 0.905 34 H 0.125 0.875 35 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 3.711 4.396 -0.074 5.753 hybrid contribution -0.858 0.544 -0.182 1.032 sum 2.853 4.940 -0.256 5.711 Atomic orbital electron populations 1.86593 1.18570 1.80257 1.50125 1.24882 0.83180 1.11319 0.97453 0.94266 0.90109 0.72078 0.76882 1.21692 1.08409 0.97274 1.01711 1.23234 0.87707 1.00308 0.86155 1.67959 1.27712 1.08089 1.25706 1.19574 0.87306 0.85906 0.87319 1.43884 1.57809 1.12083 1.17384 1.21739 0.90793 0.97421 0.86231 0.86971 1.23382 0.97487 0.99064 0.96544 1.21115 0.92353 1.00153 0.91046 0.87078 1.23234 0.94373 0.87856 0.99936 1.70176 1.21810 1.25990 1.07591 1.22745 0.96897 0.98834 1.02758 1.23288 1.02666 0.98063 0.93650 1.43248 1.25543 1.21012 1.26228 1.23513 0.97310 0.97499 0.99263 1.67988 1.17352 1.40777 1.05192 1.23151 0.89136 0.91735 0.91422 0.76558 0.85150 1.22965 1.20360 0.79570 0.74335 0.87770 0.90068 0.80665 0.77291 0.72625 0.90489 0.87477 0.80124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.30 12.85 -148.98 -1.91 -1.62 16 2 C -0.06 0.24 2.83 71.24 0.20 0.44 16 3 Si 0.76 -4.02 29.94 68.60 2.05 -1.97 16 4 C -0.28 0.53 5.36 -19.69 -0.11 0.43 16 5 C 0.19 -0.29 9.92 84.71 0.84 0.55 16 6 N -0.57 -1.32 9.13 -197.98 -1.81 -3.12 16 7 C 0.56 2.03 8.43 261.49 2.20 4.23 16 8 N -0.68 0.25 5.41 -327.93 -1.77 -1.53 16 9 C 0.14 -0.54 4.33 45.52 0.20 -0.34 16 10 H 0.11 -0.32 7.37 -2.39 -0.02 -0.34 16 11 C -0.13 0.48 7.38 31.12 0.23 0.71 16 12 C -0.03 0.05 4.17 -11.01 -0.05 0.01 16 13 H 0.11 -0.07 8.14 -2.39 -0.02 -0.09 16 14 C 0.21 0.61 7.36 138.13 1.02 1.62 16 15 N -0.54 -5.13 11.25 -188.13 -2.12 -7.25 16 16 C -0.07 -0.35 11.87 83.52 0.99 0.64 16 17 C -0.04 0.04 12.04 83.08 1.00 1.04 16 18 N -0.56 1.35 5.94 -186.27 -1.11 0.25 16 19 C -0.14 0.76 7.35 31.12 0.23 0.99 16 20 N -0.59 -2.85 10.46 -197.98 -2.07 -4.92 16 21 C 0.21 0.23 10.99 84.71 0.93 1.16 16 22 H 0.39 -2.15 8.70 -74.06 -0.64 -2.79 16 23 H 0.13 -0.80 7.96 -2.39 -0.02 -0.82 16 24 H -0.30 -0.92 7.11 99.48 0.71 -0.22 16 25 H -0.28 0.55 7.03 99.48 0.70 1.25 16 26 H 0.19 -1.26 5.01 -2.91 -0.01 -1.27 16 27 H 0.42 -0.60 8.82 -92.71 -0.82 -1.42 16 28 H 0.10 -0.49 8.09 -2.39 -0.02 -0.51 16 29 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 30 H 0.18 0.37 8.06 -2.91 -0.02 0.35 16 31 H 0.21 -1.78 8.06 -2.91 -0.02 -1.80 16 32 H 0.43 -3.94 7.53 -92.71 -0.70 -4.63 16 33 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 34 H 0.11 -1.03 6.64 -2.39 -0.02 -1.04 16 35 H 0.18 -0.42 8.06 -2.91 -0.02 -0.45 16 Total: 0.00 -21.00 299.86 -2.01 -23.01 By element: Atomic # 1 Polarization: -13.36 SS G_CDS: -0.97 Total: -14.32 kcal Atomic # 6 Polarization: 3.79 SS G_CDS: 7.69 Total: 11.48 kcal Atomic # 7 Polarization: -7.70 SS G_CDS: -8.88 Total: -16.58 kcal Atomic # 8 Polarization: 0.30 SS G_CDS: -1.91 Total: -1.62 kcal Atomic # 14 Polarization: -4.02 SS G_CDS: 2.05 Total: -1.97 kcal Total: -21.00 -2.01 -23.01 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16969812_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 147.122 kcal (2) G-P(sol) polarization free energy of solvation -20.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 126.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.015 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.012 kcal (6) G-S(sol) free energy of system = (1) + (5) 124.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds