Wall clock time and date at job start Mon Mar 8 2021 08:10:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.37986 * 120.32513 * 119.72246 * 4 2 1 6 6 N 1.32020 * 120.90211 * 179.75141 * 5 4 2 7 7 C 1.32339 * 121.64071 * 0.53569 * 6 5 4 8 8 N 1.39146 * 119.71344 * 179.70270 * 7 6 5 9 9 C 1.46493 * 120.00292 * 0.02786 * 8 7 6 10 10 H 1.09005 * 112.85001 * 336.19341 * 9 8 7 11 11 C 1.53779 * 113.61326 * 107.49764 * 9 8 7 12 12 C 1.53775 * 87.07967 * 89.12110 * 11 9 8 13 13 H 1.08999 * 113.61408 * 270.88137 * 12 11 9 14 14 C 1.50702 * 113.61799 * 139.98458 * 12 11 9 15 15 N 1.30500 * 125.65241 * 167.52613 * 14 12 11 16 16 C 1.34122 * 109.25489 * 179.97438 * 15 14 12 17 17 C 1.34669 * 108.02370 * 0.02562 * 16 15 14 18 18 N 1.35040 * 125.64866 * 347.21444 * 14 12 11 19 19 C 1.53774 * 87.08469 * 25.43131 * 12 11 9 20 20 C 1.39347 * 120.56502 * 359.73589 * 7 6 5 21 21 F 1.35095 * 120.46680 * 180.02562 * 20 7 6 22 22 C 1.38437 * 119.05790 * 359.97438 * 20 7 6 23 23 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 24 24 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 25 25 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 26 26 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 27 27 H 1.08002 * 119.55054 * 0.02978 * 5 4 2 28 28 H 0.97000 * 119.99664 * 180.02562 * 8 7 6 29 29 H 1.09005 * 113.61374 * 203.66573 * 11 9 8 30 30 H 1.08992 * 113.61796 * 334.56472 * 11 9 8 31 31 H 1.08002 * 125.98797 * 179.97438 * 16 15 14 32 32 H 1.08007 * 126.59263 * 180.02562 * 17 16 15 33 33 H 0.97011 * 126.39575 * 0.02562 * 18 14 12 34 34 H 1.08999 * 113.61675 * 220.02032 * 19 12 11 35 35 H 1.08998 * 113.61699 * 89.11806 * 19 12 11 36 36 H 1.08003 * 120.75786 * 180.02562 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7203 -0.0447 -2.1460 6 7 3.1706 -0.6574 -3.2253 7 6 2.8780 -1.9230 -3.4781 8 7 3.3692 -2.5274 -4.6312 9 6 4.2069 -1.7632 -5.5588 10 1 4.0465 -0.6875 -5.4859 11 6 5.6895 -2.1704 -5.5282 12 6 5.3456 -3.2080 -6.6098 13 1 5.0336 -4.1716 -6.2070 14 6 6.3968 -3.3332 -7.6823 15 7 6.4643 -4.2837 -8.5740 16 6 7.5269 -4.0736 -9.3649 17 6 8.1416 -2.9505 -8.9472 18 7 7.4217 -2.4773 -7.8836 19 6 4.1718 -2.2949 -7.0013 20 6 2.0817 -2.6553 -2.5998 21 9 1.7846 -3.9473 -2.8597 22 6 1.6002 -2.0403 -1.4568 23 1 -0.3934 0.4417 -0.7651 24 1 1.7923 -0.5139 0.8900 25 1 1.5879 2.4585 -1.2243 26 1 1.5615 2.4679 1.2085 27 1 2.9767 0.9904 -1.9751 28 1 3.1570 -3.4547 -4.8208 29 1 6.3646 -1.3873 -5.8734 30 1 6.0014 -2.6127 -4.5822 31 1 7.8360 -4.6964 -10.1914 32 1 9.0290 -2.5058 -9.3731 33 1 7.6135 -1.6777 -7.3688 34 1 3.2585 -2.8378 -7.2445 35 1 4.4319 -1.5458 -7.7492 36 1 0.9810 -2.5822 -0.7572 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16969812_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:10:44 Heat of formation + Delta-G solvation = 61.101772 kcal Electronic energy + Delta-G solvation = -22318.822899 eV Core-core repulsion = 18721.315862 eV Total energy + Delta-G solvation = -3597.507037 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -49.90017 -43.08658 -41.53974 -40.20516 -38.09354 -35.53508 -33.41806 -33.23184 -31.58211 -30.31415 -27.01692 -26.86717 -26.10842 -24.73798 -23.06529 -22.52129 -21.72112 -20.57281 -19.66107 -19.04392 -18.45524 -18.22618 -17.59608 -17.01162 -16.66238 -16.30999 -16.09493 -16.02607 -15.62163 -15.45965 -15.27166 -14.92076 -14.56299 -14.51286 -14.35472 -14.01491 -13.78757 -13.58749 -13.43093 -12.74312 -12.52105 -12.17041 -12.07795 -11.60276 -11.32491 -10.95037 -10.94729 -10.84291 -10.67166 -10.58112 -9.32951 -8.85174 -5.05025 -0.11751 0.06713 1.08732 1.18058 1.50765 1.81028 1.89461 2.13226 2.20238 2.49095 2.98782 3.12107 3.26135 3.30237 3.30974 3.49641 3.51608 3.68086 3.79030 3.90698 4.00357 4.12469 4.39424 4.40455 4.42508 4.48286 4.49881 4.60015 4.65460 4.72996 4.76397 4.85182 4.92795 4.99543 5.16547 5.35932 5.81617 5.88410 6.09703 6.31784 6.38180 6.88471 7.17157 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.682 3.318 4 C -0.206 4.206 5 C 0.147 3.853 6 N -0.511 5.511 7 C 0.392 3.608 8 N -0.699 5.699 9 C 0.139 3.861 10 H 0.114 0.886 11 C -0.150 4.150 12 C -0.026 4.026 13 H 0.118 0.882 14 C 0.218 3.782 15 N -0.488 5.488 16 C -0.027 4.027 17 C -0.056 4.056 18 N -0.565 5.565 19 C -0.135 4.135 20 C -0.017 4.017 21 F -0.132 7.132 22 C -0.038 4.038 23 H 0.377 0.623 24 H 0.121 0.879 25 H -0.256 1.256 26 H -0.254 1.254 27 H 0.164 0.836 28 H 0.415 0.585 29 H 0.087 0.913 30 H 0.083 0.917 31 H 0.171 0.829 32 H 0.178 0.822 33 H 0.418 0.582 34 H 0.084 0.916 35 H 0.097 0.903 36 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.292 3.815 0.631 5.078 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.173 4.173 3 Si 0.583 3.417 4 C -0.211 4.211 5 C -0.010 4.010 6 N -0.227 5.227 7 C 0.154 3.846 8 N -0.332 5.332 9 C 0.032 3.968 10 H 0.132 0.868 11 C -0.190 4.190 12 C -0.046 4.046 13 H 0.136 0.864 14 C -0.046 4.046 15 N -0.207 5.207 16 C -0.175 4.175 17 C -0.190 4.190 18 N -0.169 5.169 19 C -0.174 4.174 20 C -0.044 4.044 21 F -0.111 7.111 22 C -0.064 4.064 23 H 0.224 0.776 24 H 0.138 0.862 25 H -0.181 1.181 26 H -0.178 1.178 27 H 0.180 0.820 28 H 0.252 0.748 29 H 0.105 0.895 30 H 0.101 0.899 31 H 0.188 0.812 32 H 0.195 0.805 33 H 0.256 0.744 34 H 0.103 0.897 35 H 0.116 0.884 36 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.253 4.151 0.337 5.284 hybrid contribution -0.841 -0.328 0.058 0.905 sum 2.412 3.823 0.395 4.537 Atomic orbital electron populations 1.86614 1.17665 1.79915 1.49387 1.24835 0.83929 1.10796 0.97691 0.95159 0.91515 0.74261 0.80803 1.20885 1.04750 0.95103 1.00393 1.22351 0.91678 0.99170 0.87785 1.67295 1.26281 1.07323 1.21814 1.18389 0.90044 0.89105 0.87069 1.44214 1.54139 1.14499 1.20355 1.21728 0.89291 0.97559 0.88203 0.86842 1.23554 0.97825 0.98285 0.99329 1.21074 0.92035 1.00072 0.91448 0.86438 1.22939 0.92581 0.89287 0.99770 1.70247 1.20499 1.24040 1.05908 1.22420 0.94695 0.98093 1.02319 1.22822 1.01703 1.00288 0.94181 1.43260 1.23074 1.23572 1.26975 1.23435 0.98554 0.99122 0.96320 1.17991 1.06688 0.80960 0.98726 1.91504 1.92160 1.33497 1.93954 1.21296 0.96162 0.94291 0.94662 0.77558 0.86163 1.18071 1.17839 0.81963 0.74767 0.89494 0.89861 0.81190 0.80458 0.74398 0.89727 0.88408 0.83215 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.01 12.78 -35.23 -0.45 -0.46 16 2 C -0.06 0.10 2.84 36.01 0.10 0.20 16 3 Si 0.68 -1.63 29.82 -169.99 -5.07 -6.70 16 4 C -0.21 0.20 5.40 -104.47 -0.56 -0.37 16 5 C 0.15 -0.13 9.84 -17.56 -0.17 -0.31 16 6 N -0.51 -0.27 9.13 -12.36 -0.11 -0.39 16 7 C 0.39 0.25 7.49 -154.85 -1.16 -0.91 16 8 N -0.70 0.67 5.41 -53.06 -0.29 0.38 16 9 C 0.14 -0.27 4.35 -67.12 -0.29 -0.56 16 10 H 0.11 -0.16 7.41 -51.93 -0.38 -0.54 16 11 C -0.15 0.39 7.36 -25.92 -0.19 0.20 16 12 C -0.03 0.03 4.17 -90.96 -0.38 -0.35 16 13 H 0.12 -0.10 8.14 -51.93 -0.42 -0.53 16 14 C 0.22 0.30 7.36 -155.42 -1.14 -0.85 16 15 N -0.49 -2.08 11.25 -10.82 -0.12 -2.20 16 16 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 17 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 18 N -0.57 0.43 5.94 -10.23 -0.06 0.36 16 19 C -0.14 0.26 7.38 -25.92 -0.19 0.07 16 20 C -0.02 -0.02 7.35 -39.10 -0.29 -0.30 16 21 F -0.13 -0.23 16.65 2.25 0.04 -0.19 16 22 C -0.04 0.00 9.75 -39.26 -0.38 -0.38 16 23 H 0.38 -1.02 8.70 45.56 0.40 -0.63 16 24 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 25 H -0.26 0.15 7.11 56.52 0.40 0.55 16 26 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 27 H 0.16 -0.51 4.88 -52.49 -0.26 -0.76 16 28 H 0.41 -0.69 8.17 -40.82 -0.33 -1.02 16 29 H 0.09 -0.35 6.64 -51.93 -0.34 -0.69 16 30 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.17 0.07 8.06 -52.49 -0.42 -0.35 16 32 H 0.18 -0.56 8.06 -52.48 -0.42 -0.99 16 33 H 0.42 -1.54 7.53 -40.81 -0.31 -1.85 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 36 H 0.15 -0.10 8.06 -52.48 -0.42 -0.52 16 LS Contribution 310.35 15.07 4.68 4.68 Total: 0.00 -7.97 310.35 -10.26 -18.22 By element: Atomic # 1 Polarization: -5.88 SS G_CDS: -3.80 Total: -9.67 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -5.07 Total: -4.03 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -0.58 Total: -1.84 kcal Atomic # 8 Polarization: -0.01 SS G_CDS: -0.45 Total: -0.46 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.04 Total: -0.19 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.07 Total: -6.70 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -7.97 -10.26 -18.22 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16969812_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.326 kcal (2) G-P(sol) polarization free energy of solvation -7.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.225 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.102 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds