Wall clock time and date at job start Mon Mar 8 2021 08:52:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46491 * 1 3 3 C 1.38411 * 120.00237 * 2 1 4 4 N 1.32492 * 119.21417 * 359.97438 * 3 2 1 5 5 C 1.32278 * 120.74115 * 180.02562 * 4 3 2 6 6 C 1.38609 * 119.19502 * 0.02562 * 5 4 3 7 7 C 1.50699 * 120.71995 * 179.97438 * 6 5 4 8 8 O 1.42905 * 109.46972 * 299.99959 * 7 6 5 9 9 Si 1.86301 * 109.47146 * 179.97438 * 7 6 5 10 10 C 1.38603 * 118.55576 * 0.24662 * 6 5 4 11 11 N 1.32271 * 119.20331 * 359.51484 * 10 6 5 12 12 C 1.46507 * 120.00163 * 179.97438 * 2 1 3 13 13 H 1.08997 * 112.85071 * 168.80630 * 12 2 1 14 14 C 1.53785 * 113.61436 * 299.99783 * 12 2 1 15 15 C 1.53779 * 87.07858 * 139.97919 * 14 12 2 16 16 H 1.08999 * 113.61129 * 220.01934 * 15 14 12 17 17 O 1.42900 * 113.61102 * 89.20311 * 15 14 12 18 18 C 1.53773 * 113.61215 * 37.49316 * 12 2 1 19 19 H 1.08993 * 109.47347 * 90.00652 * 1 2 3 20 20 H 1.09000 * 109.46982 * 210.00699 * 1 2 3 21 21 H 1.09000 * 109.47023 * 330.00044 * 1 2 3 22 22 H 1.08003 * 120.40236 * 179.97438 * 5 4 3 23 23 H 1.09001 * 109.47358 * 59.99320 * 7 6 5 24 24 H 0.96696 * 114.00036 * 179.97438 * 8 7 6 25 25 H 1.48497 * 109.99842 * 59.99749 * 9 7 6 26 26 H 1.48498 * 109.99736 * 181.31738 * 9 7 6 27 27 H 1.08006 * 120.39597 * 179.72758 * 10 6 5 28 28 H 1.08999 * 113.61664 * 254.53101 * 14 12 2 29 29 H 1.08998 * 113.60957 * 25.34517 * 14 12 2 30 30 H 0.96703 * 113.99182 * 179.97438 * 17 15 14 31 31 H 1.09002 * 113.61752 * 334.57228 * 18 12 2 32 32 H 1.09008 * 113.61412 * 105.47219 * 18 12 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1570 1.1986 0.0000 4 7 1.4789 2.3369 -0.0005 5 6 2.1096 3.4996 -0.0010 6 6 3.4956 3.5171 -0.0016 7 6 4.2491 4.8221 -0.0028 8 8 3.9034 5.5707 -1.1700 9 14 6.0807 4.4817 -0.0025 10 6 4.1734 2.3081 -0.0068 11 7 3.4819 1.1805 -0.0013 12 6 2.1975 -1.2688 0.0006 13 1 3.2624 -1.1427 -0.1945 14 6 1.8954 -2.1540 1.2213 15 6 1.9129 -3.3524 0.2578 16 1 1.1382 -4.0906 0.4651 17 8 3.2068 -3.9367 0.0946 18 6 1.5373 -2.3615 -0.8565 19 1 -0.3634 -0.0001 -1.0276 20 1 -0.3633 -0.8899 0.5139 21 1 -0.3633 0.8900 0.5138 22 1 1.5514 4.4242 -0.0019 23 1 3.9860 5.3944 0.8869 24 1 4.3520 6.4247 -1.2367 25 1 6.4525 3.7018 -1.2102 26 1 6.8349 5.7605 0.0285 27 1 5.2532 2.2870 -0.0118 28 1 2.6998 -2.1730 1.9566 29 1 0.9189 -1.9645 1.6670 30 1 3.2240 -4.6912 -0.5100 31 1 0.4623 -2.2299 -0.9798 32 1 2.0527 -2.5483 -1.7988 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16977506_12175864.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:52:36 Heat of formation + Delta-G solvation = 25.081363 kcal Electronic energy + Delta-G solvation = -17003.501677 eV Core-core repulsion = 14160.846412 eV Total energy + Delta-G solvation = -2842.655265 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -42.18953 -40.63618 -38.15680 -37.13015 -35.03604 -34.63356 -32.62987 -28.53841 -27.00888 -26.76504 -25.44182 -24.50692 -22.57862 -20.45486 -19.31789 -18.99447 -18.44878 -17.84648 -16.68088 -16.59361 -16.47537 -16.07577 -15.67525 -15.26227 -14.89167 -14.62989 -14.24789 -13.95291 -13.61068 -13.48222 -13.32181 -13.04330 -12.81660 -12.38646 -12.25500 -11.92272 -11.71963 -11.36414 -11.11814 -10.78312 -10.61502 -10.04701 -8.89992 -4.93666 0.00583 0.11238 1.29199 1.58038 1.61022 1.94754 2.70582 3.08003 3.14269 3.37185 3.45285 3.53426 3.63314 3.68024 3.83852 3.88052 4.10738 4.16749 4.29625 4.52698 4.55976 4.60346 4.65409 4.74677 4.76715 4.90392 4.95676 4.98143 5.11923 5.32921 5.79406 5.81386 6.31709 6.62702 6.87435 7.17203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.097 3.903 2 N -0.577 5.577 3 C 0.545 3.455 4 N -0.583 5.583 5 C 0.212 3.788 6 C -0.250 4.250 7 C -0.057 4.057 8 O -0.559 6.559 9 Si 0.751 3.249 10 C 0.191 3.809 11 N -0.583 5.583 12 C 0.134 3.866 13 H 0.105 0.895 14 C -0.145 4.145 15 C 0.088 3.912 16 H 0.098 0.902 17 O -0.572 6.572 18 C -0.173 4.173 19 H 0.055 0.945 20 H 0.094 0.906 21 H 0.074 0.926 22 H 0.186 0.814 23 H 0.105 0.895 24 H 0.397 0.603 25 H -0.300 1.300 26 H -0.278 1.278 27 H 0.184 0.816 28 H 0.066 0.934 29 H 0.111 0.889 30 H 0.400 0.600 31 H 0.109 0.891 32 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.204 -0.809 2.269 2.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.045 4.045 2 N -0.292 5.292 3 C 0.190 3.810 4 N -0.306 5.306 5 C 0.045 3.955 6 C -0.258 4.258 7 C -0.167 4.167 8 O -0.369 6.369 9 Si 0.656 3.344 10 C 0.024 3.976 11 N -0.305 5.305 12 C 0.031 3.969 13 H 0.123 0.877 14 C -0.184 4.184 15 C 0.029 3.971 16 H 0.116 0.884 17 O -0.381 6.381 18 C -0.212 4.212 19 H 0.074 0.926 20 H 0.113 0.887 21 H 0.092 0.908 22 H 0.203 0.797 23 H 0.122 0.878 24 H 0.248 0.752 25 H -0.228 1.228 26 H -0.204 1.204 27 H 0.200 0.800 28 H 0.085 0.915 29 H 0.130 0.870 30 H 0.250 0.750 31 H 0.127 0.873 32 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -1.301 -1.820 2.168 3.116 hybrid contribution 0.134 1.520 -1.236 1.964 sum -1.168 -0.300 0.932 1.524 Atomic orbital electron populations 1.21729 0.76513 1.04020 1.02222 1.46359 1.06358 1.01010 1.75432 1.19693 0.85635 0.87195 0.88450 1.68019 1.41160 0.98244 1.23147 1.23195 0.91597 0.95390 0.85344 1.20829 0.96374 0.96191 1.12364 1.24542 1.09971 0.91298 0.90878 1.86536 1.70185 1.36245 1.43978 0.94396 0.72363 0.81348 0.86327 1.23099 1.00645 0.86347 0.87509 1.67936 1.07288 1.32172 1.23131 1.22690 0.97126 0.79750 0.97377 0.87749 1.23614 1.03539 0.94111 0.97161 1.22496 0.85658 0.93724 0.95249 0.88401 1.86450 1.29745 1.51939 1.69947 1.24149 1.02638 0.95569 0.98861 0.92630 0.88737 0.90756 0.79697 0.87770 0.75159 1.22784 1.20408 0.80008 0.91470 0.87045 0.74953 0.87256 0.90719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.03 9.04 127.77 1.16 1.18 16 2 N -0.58 -3.24 3.18 -708.69 -2.26 -5.49 16 3 C 0.55 5.46 8.18 261.48 2.14 7.60 16 4 N -0.58 -5.37 9.11 -197.97 -1.80 -7.18 16 5 C 0.21 1.15 10.92 84.71 0.93 2.08 16 6 C -0.25 -0.92 5.43 -19.69 -0.11 -1.03 16 7 C -0.06 0.09 2.84 71.24 0.20 0.30 16 8 O -0.56 -0.42 12.76 -148.98 -1.90 -2.32 16 9 Si 0.75 -1.88 29.87 68.60 2.05 0.16 16 10 C 0.19 1.04 9.92 84.71 0.84 1.88 16 11 N -0.58 -5.86 9.00 -197.98 -1.78 -7.64 16 12 C 0.13 0.51 4.16 45.51 0.19 0.70 16 13 H 0.10 0.92 7.11 -2.39 -0.02 0.90 16 14 C -0.15 -0.08 7.45 31.12 0.23 0.15 16 15 C 0.09 -0.18 5.27 31.12 0.16 -0.02 16 16 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 17 O -0.57 -0.46 13.59 -148.98 -2.03 -2.48 16 18 C -0.17 0.24 7.34 31.12 0.23 0.47 16 19 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 20 H 0.09 -0.47 6.34 -2.39 -0.02 -0.48 16 21 H 0.07 0.17 7.33 -2.39 -0.02 0.15 16 22 H 0.19 0.11 8.06 -2.91 -0.02 0.08 16 23 H 0.10 -0.69 7.96 -2.39 -0.02 -0.71 16 24 H 0.40 -2.96 8.74 -74.06 -0.65 -3.61 16 25 H -0.30 -1.64 7.11 99.48 0.71 -0.93 16 26 H -0.28 -0.28 7.11 99.48 0.71 0.43 16 27 H 0.18 0.03 5.04 -2.91 -0.01 0.02 16 28 H 0.07 0.26 8.14 -2.39 -0.02 0.24 16 29 H 0.11 -0.30 6.92 -2.39 -0.02 -0.32 16 30 H 0.40 -3.11 9.12 -74.06 -0.68 -3.78 16 31 H 0.11 -0.48 6.72 -2.39 -0.02 -0.49 16 32 H 0.07 -0.02 8.14 -2.38 -0.02 -0.04 16 Total: 0.00 -18.98 268.21 -1.88 -20.86 By element: Atomic # 1 Polarization: -9.08 SS G_CDS: -0.13 Total: -9.21 kcal Atomic # 6 Polarization: 7.33 SS G_CDS: 5.97 Total: 13.30 kcal Atomic # 7 Polarization: -14.47 SS G_CDS: -5.84 Total: -20.31 kcal Atomic # 8 Polarization: -0.87 SS G_CDS: -3.93 Total: -4.80 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: 2.05 Total: 0.16 kcal Total: -18.98 -1.88 -20.86 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16977506_12175864.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.938 kcal (2) G-P(sol) polarization free energy of solvation -18.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.959 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.856 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.081 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds