Wall clock time and date at job start Mon Mar 8 2021 08:52:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.39001 * 119.99991 * 2 1 4 4 N 1.32394 * 119.70809 * 10.03938 * 3 2 1 5 5 C 1.31972 * 121.62474 * 180.02562 * 4 3 2 6 6 C 1.38019 * 120.85798 * 0.02562 * 5 4 3 7 7 C 1.50696 * 120.33978 * 179.97438 * 6 5 4 8 8 O 1.42894 * 109.47360 * 245.00176 * 7 6 5 9 9 Si 1.86307 * 109.46850 * 5.00104 * 7 6 5 10 10 C 1.38890 * 119.32722 * 359.97438 * 6 5 4 11 11 C 1.38292 * 118.50458 * 359.73445 * 10 6 5 12 12 C 1.46497 * 119.99917 * 179.97438 * 2 1 3 13 13 H 1.09007 * 112.85036 * 162.93354 * 12 2 1 14 14 C 1.53778 * 113.61980 * 294.12908 * 12 2 1 15 15 C 1.53784 * 87.08128 * 89.11677 * 14 12 2 16 16 H 1.09001 * 113.61312 * 270.80310 * 15 14 12 17 17 O 1.42895 * 113.61771 * 139.98428 * 15 14 12 18 18 C 1.53781 * 87.17033 * 25.39000 * 15 14 12 19 19 H 1.09001 * 109.47261 * 270.00636 * 1 2 3 20 20 H 1.09002 * 109.46949 * 30.00310 * 1 2 3 21 21 H 1.08995 * 109.47301 * 150.00780 * 1 2 3 22 22 H 1.08000 * 119.57064 * 179.97438 * 5 4 3 23 23 H 1.09000 * 109.47519 * 124.99677 * 7 6 5 24 24 H 0.96703 * 114.00482 * 59.99495 * 8 7 6 25 25 H 1.48501 * 109.99998 * 180.02562 * 9 7 6 26 26 H 1.48501 * 109.99878 * 301.31805 * 9 7 6 27 27 H 1.08000 * 120.74583 * 180.02562 * 10 6 5 28 28 H 1.08007 * 120.45413 * 180.28534 * 11 10 6 29 29 H 1.09003 * 113.61330 * 334.56957 * 14 12 2 30 30 H 1.08994 * 113.69553 * 203.67658 * 14 12 2 31 31 H 0.96695 * 114.00242 * 181.52993 * 17 15 14 32 32 H 1.09004 * 113.61262 * 89.16233 * 18 15 14 33 33 H 1.09000 * 113.61850 * 220.05865 * 18 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1600 1.2038 0.0000 4 7 1.5074 2.3382 0.2005 5 6 2.1292 3.5022 0.2077 6 6 3.4922 3.5780 0.0043 7 6 4.1902 4.9135 0.0143 8 8 4.7227 5.1825 -1.2841 9 14 2.9732 6.2468 0.4748 10 6 4.2140 2.4109 -0.2097 11 6 3.5361 1.2055 -0.2056 12 6 2.1974 -1.2687 0.0006 13 1 3.2407 -1.1553 -0.2943 14 6 2.0067 -2.0897 1.2868 15 6 0.7885 -2.7321 0.6025 16 1 -0.1420 -2.1889 0.7679 17 8 0.6647 -4.1336 0.8519 18 6 1.4640 -2.4024 -0.7391 19 1 -0.3634 0.0001 1.0277 20 1 -0.3633 0.8900 -0.5139 21 1 -0.3633 -0.8900 -0.5137 22 1 1.5640 4.4073 0.3740 23 1 5.0009 4.8944 0.7427 24 1 4.0561 5.2142 -1.9839 25 1 3.6491 7.5690 0.4877 26 1 1.8466 6.2622 -0.4926 27 1 5.2814 2.4435 -0.3709 28 1 4.0670 0.2783 -0.3642 29 1 1.7504 -1.4850 2.1568 30 1 2.8175 -2.7912 1.4830 31 1 -0.0863 -4.5478 0.4053 32 1 2.1268 -3.1892 -1.0992 33 1 0.7703 -2.0498 -1.5023 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16977506_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:52:39 Heat of formation + Delta-G solvation = 11.834144 kcal Electronic energy + Delta-G solvation = -16913.491934 eV Core-core repulsion = 14135.688138 eV Total energy + Delta-G solvation = -2777.803796 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 237.115 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -41.76922 -40.61094 -38.09204 -36.94725 -34.82254 -33.33299 -31.84712 -28.58905 -26.92478 -26.65949 -24.48075 -24.11038 -22.47522 -20.50030 -19.11410 -18.50045 -18.09445 -17.51776 -16.57790 -16.38986 -16.26714 -16.04887 -15.83922 -15.10034 -14.86257 -14.32807 -14.21305 -14.10742 -13.55634 -13.48926 -13.27685 -13.06638 -12.72717 -12.41928 -12.36545 -11.93347 -11.51310 -10.96893 -10.86760 -10.71849 -10.52800 -10.32950 -8.59800 -4.95442 0.22000 0.41306 1.30150 1.58900 1.72838 1.97210 2.80827 3.10362 3.26841 3.39612 3.45941 3.51943 3.70950 3.75150 3.81743 3.89384 4.04573 4.21104 4.28023 4.36000 4.53958 4.55601 4.59365 4.62271 4.75028 4.80152 4.86094 4.86757 4.97989 5.00006 5.32209 5.53090 5.88758 6.31308 6.42067 6.59841 7.11161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.091 3.909 2 N -0.594 5.594 3 C 0.409 3.591 4 N -0.535 5.535 5 C 0.153 3.847 6 C -0.231 4.231 7 C -0.059 4.059 8 O -0.532 6.532 9 Si 0.680 3.320 10 C -0.006 4.006 11 C -0.236 4.236 12 C 0.130 3.870 13 H 0.108 0.892 14 C -0.143 4.143 15 C 0.072 3.928 16 H 0.087 0.913 17 O -0.559 6.559 18 C -0.179 4.179 19 H 0.052 0.948 20 H 0.077 0.923 21 H 0.069 0.931 22 H 0.155 0.845 23 H 0.117 0.883 24 H 0.375 0.625 25 H -0.256 1.256 26 H -0.259 1.259 27 H 0.136 0.864 28 H 0.135 0.865 29 H 0.079 0.921 30 H 0.102 0.898 31 H 0.380 0.620 32 H 0.104 0.896 33 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.463 -1.767 0.252 2.308 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 N -0.307 5.307 3 C 0.176 3.824 4 N -0.252 5.252 5 C -0.004 4.004 6 C -0.236 4.236 7 C -0.170 4.170 8 O -0.338 6.338 9 Si 0.581 3.419 10 C -0.031 4.031 11 C -0.260 4.260 12 C 0.025 3.975 13 H 0.126 0.874 14 C -0.182 4.182 15 C 0.013 3.987 16 H 0.104 0.896 17 O -0.365 6.365 18 C -0.218 4.218 19 H 0.070 0.930 20 H 0.096 0.904 21 H 0.087 0.913 22 H 0.172 0.828 23 H 0.134 0.866 24 H 0.223 0.777 25 H -0.180 1.180 26 H -0.184 1.184 27 H 0.154 0.846 28 H 0.153 0.847 29 H 0.097 0.903 30 H 0.120 0.880 31 H 0.227 0.773 32 H 0.123 0.877 33 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -1.784 -1.087 0.829 2.248 hybrid contribution 0.428 -0.343 -1.645 1.734 sum -1.356 -1.430 -0.816 2.133 Atomic orbital electron populations 1.21735 0.78776 1.02883 1.01708 1.45996 1.05429 1.01292 1.77942 1.18297 0.88167 0.85946 0.90012 1.67177 1.40049 0.97467 1.20461 1.22287 0.91063 0.94579 0.92502 1.20937 0.95303 0.96836 1.10564 1.24760 1.05555 0.98668 0.88033 1.86596 1.37426 1.93051 1.16722 0.95103 0.77984 0.78070 0.90717 1.21200 1.00226 0.90623 0.91084 1.21534 0.93698 0.99713 1.11076 1.21767 0.96756 0.82001 0.96953 0.87420 1.23589 0.98360 0.98312 0.97982 1.23639 0.97954 0.82223 0.94923 0.89551 1.86532 1.53753 1.21433 1.74762 1.24139 1.01066 0.98341 0.98224 0.92975 0.90398 0.91284 0.82790 0.86567 0.77742 1.18046 1.18359 0.84591 0.84735 0.90255 0.87972 0.77277 0.87731 0.90354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.05 8.70 59.85 0.52 0.47 16 2 N -0.59 -0.25 3.19 -173.05 -0.55 -0.80 16 3 C 0.41 0.81 7.33 -155.02 -1.14 -0.33 16 4 N -0.54 -1.47 9.25 -12.44 -0.12 -1.59 16 5 C 0.15 0.18 9.84 -17.57 -0.17 0.01 16 6 C -0.23 -0.13 5.36 -104.46 -0.56 -0.69 16 7 C -0.06 0.01 2.82 36.00 0.10 0.11 16 8 O -0.53 -0.66 12.84 -35.23 -0.45 -1.11 16 9 Si 0.68 -0.60 29.91 -169.99 -5.08 -5.69 16 10 C -0.01 0.00 9.84 -39.32 -0.39 -0.39 16 11 C -0.24 -0.19 9.36 -39.23 -0.37 -0.56 16 12 C 0.13 -0.14 4.35 -67.03 -0.29 -0.43 16 13 H 0.11 -0.20 5.72 -51.92 -0.30 -0.50 16 14 C -0.14 0.09 7.65 -25.92 -0.20 -0.11 16 15 C 0.07 -0.08 4.56 -25.92 -0.12 -0.19 16 16 H 0.09 -0.16 5.81 -51.93 -0.30 -0.46 16 17 O -0.56 -0.06 13.67 -35.23 -0.48 -0.54 16 18 C -0.18 0.33 7.12 -25.83 -0.18 0.14 16 19 H 0.05 -0.03 8.05 -51.93 -0.42 -0.44 16 20 H 0.08 0.03 7.55 -51.93 -0.39 -0.36 16 21 H 0.07 -0.15 4.98 -51.93 -0.26 -0.41 16 22 H 0.16 -0.09 4.85 -52.49 -0.25 -0.35 16 23 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 24 H 0.38 -0.52 8.70 45.56 0.40 -0.13 16 25 H -0.26 -0.61 7.11 56.52 0.40 -0.20 16 26 H -0.26 -0.26 7.01 56.52 0.40 0.14 16 27 H 0.14 -0.08 8.06 -52.49 -0.42 -0.51 16 28 H 0.13 -0.13 5.86 -52.48 -0.31 -0.44 16 29 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.38 -1.46 9.12 45.56 0.42 -1.05 16 32 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.08 -0.15 6.98 -51.93 -0.36 -0.52 16 LS Contribution 267.94 15.07 4.04 4.04 Total: 0.00 -6.40 267.94 -8.53 -14.92 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -3.09 Total: -7.26 kcal Atomic # 6 Polarization: 0.83 SS G_CDS: -2.79 Total: -1.97 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -0.67 Total: -2.39 kcal Atomic # 8 Polarization: -0.72 SS G_CDS: -0.93 Total: -1.66 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.08 Total: -5.69 kcal Total LS contribution 4.04 Total: 4.04 kcal Total: -6.40 -8.53 -14.92 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16977506_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.758 kcal (2) G-P(sol) polarization free energy of solvation -6.397 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.526 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.923 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds