Wall clock time and date at job start Mon Mar 8 2021 08:52:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.39001 * 119.99991 * 2 1 4 4 N 1.32394 * 119.70809 * 10.03938 * 3 2 1 5 5 C 1.31972 * 121.62474 * 180.02562 * 4 3 2 6 6 C 1.38019 * 120.85798 * 0.02562 * 5 4 3 7 7 C 1.50696 * 120.33978 * 179.97438 * 6 5 4 8 8 O 1.42894 * 109.47360 * 245.00176 * 7 6 5 9 9 Si 1.86307 * 109.46850 * 5.00104 * 7 6 5 10 10 C 1.38890 * 119.32722 * 359.97438 * 6 5 4 11 11 C 1.38292 * 118.50458 * 359.73445 * 10 6 5 12 12 C 1.46497 * 119.99917 * 179.97438 * 2 1 3 13 13 H 1.09007 * 112.85036 * 162.93354 * 12 2 1 14 14 C 1.53778 * 113.61980 * 294.12908 * 12 2 1 15 15 C 1.53784 * 87.08128 * 89.11677 * 14 12 2 16 16 H 1.09001 * 113.61312 * 270.80310 * 15 14 12 17 17 O 1.42895 * 113.61771 * 139.98428 * 15 14 12 18 18 C 1.53781 * 87.17033 * 25.39000 * 15 14 12 19 19 H 1.09001 * 109.47261 * 270.00636 * 1 2 3 20 20 H 1.09002 * 109.46949 * 30.00310 * 1 2 3 21 21 H 1.08995 * 109.47301 * 150.00780 * 1 2 3 22 22 H 1.08000 * 119.57064 * 179.97438 * 5 4 3 23 23 H 1.09000 * 109.47519 * 124.99677 * 7 6 5 24 24 H 0.96703 * 114.00482 * 59.99495 * 8 7 6 25 25 H 1.48501 * 109.99998 * 180.02562 * 9 7 6 26 26 H 1.48501 * 109.99878 * 301.31805 * 9 7 6 27 27 H 1.08000 * 120.74583 * 180.02562 * 10 6 5 28 28 H 1.08007 * 120.45413 * 180.28534 * 11 10 6 29 29 H 1.09003 * 113.61330 * 334.56957 * 14 12 2 30 30 H 1.08994 * 113.69553 * 203.67658 * 14 12 2 31 31 H 0.96695 * 114.00242 * 181.52993 * 17 15 14 32 32 H 1.09004 * 113.61262 * 89.16233 * 18 15 14 33 33 H 1.09000 * 113.61850 * 220.05865 * 18 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1600 1.2038 0.0000 4 7 1.5074 2.3382 0.2005 5 6 2.1292 3.5022 0.2077 6 6 3.4922 3.5780 0.0043 7 6 4.1902 4.9135 0.0143 8 8 4.7227 5.1825 -1.2841 9 14 2.9732 6.2468 0.4748 10 6 4.2140 2.4109 -0.2097 11 6 3.5361 1.2055 -0.2056 12 6 2.1974 -1.2687 0.0006 13 1 3.2407 -1.1553 -0.2943 14 6 2.0067 -2.0897 1.2868 15 6 0.7885 -2.7321 0.6025 16 1 -0.1420 -2.1889 0.7679 17 8 0.6647 -4.1336 0.8519 18 6 1.4640 -2.4024 -0.7391 19 1 -0.3634 0.0001 1.0277 20 1 -0.3633 0.8900 -0.5139 21 1 -0.3633 -0.8900 -0.5137 22 1 1.5640 4.4073 0.3740 23 1 5.0009 4.8944 0.7427 24 1 4.0561 5.2142 -1.9839 25 1 3.6491 7.5690 0.4877 26 1 1.8466 6.2622 -0.4926 27 1 5.2814 2.4435 -0.3709 28 1 4.0670 0.2783 -0.3642 29 1 1.7504 -1.4850 2.1568 30 1 2.8175 -2.7912 1.4830 31 1 -0.0863 -4.5478 0.4053 32 1 2.1268 -3.1892 -1.0992 33 1 0.7703 -2.0498 -1.5023 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16977506_13915762.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:52:38 Heat of formation + Delta-G solvation = 11.973868 kcal Electronic energy + Delta-G solvation = -16913.485875 eV Core-core repulsion = 14135.688138 eV Total energy + Delta-G solvation = -2777.797737 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 237.115 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.75922 -40.57152 -38.11389 -36.91776 -34.79083 -33.37101 -31.85584 -28.54994 -26.84450 -26.63879 -24.46846 -24.10123 -22.46912 -20.44182 -19.05253 -18.51228 -18.08116 -17.52100 -16.52619 -16.39893 -16.27215 -16.03715 -15.82157 -15.06247 -14.80253 -14.38663 -14.23009 -14.11666 -13.49721 -13.45063 -13.28386 -12.96465 -12.67498 -12.42568 -12.31170 -12.02876 -11.41124 -10.97042 -10.81655 -10.72217 -10.54734 -10.38076 -8.60226 -4.91513 0.18069 0.37259 1.32941 1.59264 1.76430 1.95719 2.76607 3.24230 3.37427 3.44602 3.52564 3.57807 3.75751 3.80372 3.85834 3.99345 4.04184 4.24376 4.33793 4.44447 4.58860 4.61161 4.69367 4.72247 4.76640 4.88871 4.90330 4.92133 4.99845 5.11150 5.31122 5.53276 5.93409 6.29533 6.49664 6.85440 7.06972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.092 3.908 2 N -0.596 5.596 3 C 0.393 3.607 4 N -0.558 5.558 5 C 0.143 3.857 6 C -0.230 4.230 7 C -0.063 4.063 8 O -0.549 6.549 9 Si 0.756 3.244 10 C -0.011 4.011 11 C -0.240 4.240 12 C 0.130 3.870 13 H 0.116 0.884 14 C -0.147 4.147 15 C 0.071 3.929 16 H 0.093 0.907 17 O -0.580 6.580 18 C -0.168 4.168 19 H 0.049 0.951 20 H 0.066 0.934 21 H 0.086 0.914 22 H 0.166 0.834 23 H 0.126 0.874 24 H 0.384 0.616 25 H -0.300 1.300 26 H -0.283 1.283 27 H 0.148 0.852 28 H 0.151 0.849 29 H 0.067 0.933 30 H 0.101 0.899 31 H 0.395 0.605 32 H 0.108 0.892 33 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.307 -2.308 0.066 2.653 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 N -0.308 5.308 3 C 0.159 3.841 4 N -0.276 5.276 5 C -0.014 4.014 6 C -0.235 4.235 7 C -0.173 4.173 8 O -0.357 6.357 9 Si 0.662 3.338 10 C -0.037 4.037 11 C -0.264 4.264 12 C 0.025 3.975 13 H 0.134 0.866 14 C -0.186 4.186 15 C 0.012 3.988 16 H 0.111 0.889 17 O -0.388 6.388 18 C -0.207 4.207 19 H 0.067 0.933 20 H 0.084 0.916 21 H 0.105 0.895 22 H 0.183 0.817 23 H 0.144 0.856 24 H 0.234 0.766 25 H -0.228 1.228 26 H -0.210 1.210 27 H 0.166 0.834 28 H 0.168 0.832 29 H 0.086 0.914 30 H 0.119 0.881 31 H 0.245 0.755 32 H 0.126 0.874 33 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.641 -1.660 0.641 2.421 hybrid contribution 0.376 -0.165 -1.595 1.647 sum -1.266 -1.826 -0.954 2.418 Atomic orbital electron populations 1.21750 0.78515 1.03156 1.01618 1.46127 1.05746 1.01325 1.77644 1.18573 0.88857 0.86234 0.90419 1.67172 1.40866 0.98136 1.21375 1.22516 0.91543 0.94695 0.92628 1.20982 0.95085 0.97169 1.10272 1.24904 1.06077 0.98518 0.87793 1.86566 1.38494 1.93098 1.17519 0.94189 0.75573 0.74815 0.89229 1.21418 1.00877 0.90601 0.90803 1.21732 0.93407 1.00519 1.10715 1.21843 0.97247 0.81591 0.96823 0.86582 1.23589 0.98776 0.98375 0.97821 1.23686 0.98032 0.81886 0.95188 0.88934 1.86487 1.54912 1.22019 1.75385 1.24058 1.00901 0.97871 0.97843 0.93251 0.91560 0.89529 0.81693 0.85621 0.76645 1.22771 1.20962 0.83433 0.83197 0.91404 0.88085 0.75492 0.87360 0.89897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.08 8.70 127.77 1.11 1.03 16 2 N -0.60 -0.56 3.19 -701.41 -2.24 -2.80 16 3 C 0.39 1.65 7.33 133.07 0.98 2.63 16 4 N -0.56 -3.39 9.25 -193.27 -1.79 -5.18 16 5 C 0.14 0.38 9.84 84.62 0.83 1.22 16 6 C -0.23 -0.23 5.36 -19.76 -0.11 -0.34 16 7 C -0.06 0.04 2.82 71.23 0.20 0.24 16 8 O -0.55 -1.29 12.84 -148.98 -1.91 -3.21 16 9 Si 0.76 -1.14 29.91 68.60 2.05 0.92 16 10 C -0.01 -0.01 9.84 22.44 0.22 0.21 16 11 C -0.24 -0.33 9.36 22.50 0.21 -0.12 16 12 C 0.13 -0.31 4.35 45.58 0.20 -0.12 16 13 H 0.12 -0.51 5.72 -2.38 -0.01 -0.53 16 14 C -0.15 0.15 7.65 31.12 0.24 0.39 16 15 C 0.07 -0.17 4.56 31.12 0.14 -0.03 16 16 H 0.09 -0.37 5.81 -2.39 -0.01 -0.39 16 17 O -0.58 0.09 13.67 -148.98 -2.04 -1.95 16 18 C -0.17 0.73 7.12 31.18 0.22 0.95 16 19 H 0.05 -0.02 8.05 -2.39 -0.02 -0.04 16 20 H 0.07 0.11 7.55 -2.39 -0.02 0.09 16 21 H 0.09 -0.42 4.98 -2.39 -0.01 -0.43 16 22 H 0.17 -0.16 4.85 -2.91 -0.01 -0.17 16 23 H 0.13 -0.33 7.96 -2.39 -0.02 -0.34 16 24 H 0.38 -1.04 8.70 -74.06 -0.64 -1.69 16 25 H -0.30 -1.78 7.11 99.48 0.71 -1.07 16 26 H -0.28 -0.68 7.01 99.48 0.70 0.01 16 27 H 0.15 -0.28 8.06 -2.91 -0.02 -0.31 16 28 H 0.15 -0.40 5.86 -2.91 -0.02 -0.42 16 29 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 30 H 0.10 -0.10 8.14 -2.39 -0.02 -0.11 16 31 H 0.39 -3.24 9.12 -74.06 -0.68 -3.91 16 32 H 0.11 -0.52 8.14 -2.38 -0.02 -0.54 16 33 H 0.08 -0.41 6.98 -2.39 -0.02 -0.43 16 Total: 0.00 -14.56 267.94 -1.82 -16.37 By element: Atomic # 1 Polarization: -10.08 SS G_CDS: -0.14 Total: -10.22 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: 4.25 Total: 6.06 kcal Atomic # 7 Polarization: -3.95 SS G_CDS: -4.03 Total: -7.98 kcal Atomic # 8 Polarization: -1.21 SS G_CDS: -3.95 Total: -5.16 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: 2.05 Total: 0.92 kcal Total: -14.56 -1.82 -16.37 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16977506_13915762.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.349 kcal (2) G-P(sol) polarization free energy of solvation -14.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.375 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds