Wall clock time and date at job start Mon Mar 8 2021 08:52:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.39144 * 111.00038 * 2 1 4 4 N 1.32333 * 119.72293 * 236.04670 * 3 2 1 5 5 C 1.32011 * 121.65124 * 179.97438 * 4 3 2 6 6 C 1.37980 * 120.89883 * 359.97438 * 5 4 3 7 7 C 1.50700 * 120.32623 * 179.97438 * 6 5 4 8 8 O 1.42898 * 109.47106 * 119.99968 * 7 6 5 9 9 Si 1.86297 * 109.47074 * 359.97438 * 7 6 5 10 10 C 1.38905 * 119.34782 * 359.97438 * 6 5 4 11 11 C 1.38444 * 118.48623 * 359.75328 * 10 6 5 12 12 F 1.35101 * 120.47699 * 180.27112 * 11 10 6 13 13 C 1.46898 * 111.00651 * 236.04708 * 2 1 3 14 14 H 1.08998 * 112.90630 * 75.19882 * 13 2 1 15 15 C 1.53778 * 113.61883 * 206.45950 * 13 2 1 16 16 C 1.53778 * 87.08449 * 139.97809 * 15 13 2 17 17 H 1.08993 * 113.61229 * 220.02023 * 16 15 13 18 18 O 1.42896 * 113.61445 * 89.11333 * 16 15 13 19 19 C 1.53784 * 87.08081 * 334.56700 * 16 15 13 20 20 H 1.09002 * 109.46757 * 183.95269 * 1 2 3 21 21 H 1.08999 * 109.47240 * 303.95220 * 1 2 3 22 22 H 1.09005 * 109.47153 * 63.95923 * 1 2 3 23 23 H 1.07995 * 119.54866 * 179.97438 * 5 4 3 24 24 H 1.09006 * 109.46970 * 239.99717 * 7 6 5 25 25 H 0.96704 * 113.99625 * 179.97438 * 8 7 6 26 26 H 1.48495 * 110.00207 * 298.68119 * 9 7 6 27 27 H 1.48500 * 109.99839 * 60.00152 * 9 7 6 28 28 H 1.08004 * 120.76102 * 179.97438 * 10 6 5 29 29 H 1.08999 * 113.61111 * 254.52872 * 15 13 2 30 30 H 1.08999 * 113.61280 * 25.34255 * 15 13 2 31 31 H 0.96698 * 113.99953 * 82.50585 * 18 16 15 32 32 H 1.09004 * 113.61451 * 270.88641 * 19 16 15 33 33 H 1.08994 * 113.61477 * 139.97943 * 19 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9676 1.2990 0.0000 4 7 2.8020 1.6815 -0.9533 5 6 3.2976 2.9045 -0.9904 6 6 2.9602 3.8352 -0.0292 7 6 3.5341 5.2276 -0.0838 8 8 2.4716 6.1767 -0.1957 9 14 4.6599 5.3779 -1.5605 10 6 2.0865 3.4761 0.9891 11 6 1.5780 2.1885 0.9995 12 9 0.7209 1.7980 1.9680 13 6 1.9956 -0.7659 -1.1375 14 1 1.9082 -0.2333 -2.0845 15 6 3.3940 -1.3554 -0.8889 16 6 2.9045 -2.6191 -1.6158 17 1 3.2476 -3.5466 -1.1577 18 8 3.1158 -2.5849 -3.0286 19 6 1.4816 -2.2142 -1.1958 20 1 -0.3633 -1.0253 0.0708 21 1 -0.3633 0.5739 0.8524 22 1 -0.3634 0.4512 -0.9234 23 1 3.9763 3.1803 -1.7839 24 1 4.1012 5.4228 0.8265 25 1 2.7683 7.0962 -0.2355 26 1 5.7866 4.4181 -1.4400 27 1 3.8990 5.1139 -2.8081 28 1 1.8073 4.1863 1.7535 29 1 4.1896 -0.8290 -1.4161 30 1 3.6189 -1.5159 0.1654 31 1 4.0089 -2.8385 -3.2989 32 1 1.1832 -2.6109 -0.2253 33 1 0.7335 -2.3812 -1.9706 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16977506_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:52:45 Heat of formation + Delta-G solvation = -30.522505 kcal Electronic energy + Delta-G solvation = -19418.245874 eV Core-core repulsion = 16169.151380 eV Total energy + Delta-G solvation = -3249.094494 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -50.00778 -41.86677 -40.41587 -38.22813 -37.22771 -34.89682 -33.53122 -31.80550 -28.31223 -26.67947 -26.39807 -25.20275 -23.89130 -22.54103 -20.57465 -19.04490 -18.78406 -18.51273 -18.05561 -17.75928 -17.03439 -16.46976 -16.39472 -16.22063 -15.60310 -15.25341 -15.11594 -14.62770 -14.47679 -14.17866 -14.13296 -13.89230 -13.48679 -13.27567 -12.99012 -12.77430 -12.47438 -12.14894 -11.87982 -11.36616 -11.14061 -10.88202 -10.67995 -10.63429 -10.42810 -9.16698 -5.10434 -0.28051 -0.04399 1.12610 1.53123 1.83924 2.16250 2.46422 3.02063 3.07370 3.09117 3.21240 3.44137 3.54481 3.69883 3.74536 3.77452 3.96332 4.15195 4.18603 4.23835 4.34412 4.43566 4.53889 4.59115 4.73114 4.80643 4.81371 4.85124 5.03033 5.08752 5.16355 5.24623 5.61881 5.96714 6.47280 6.66642 6.68602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 N -0.467 5.467 3 C 0.296 3.704 4 N -0.483 5.483 5 C 0.117 3.883 6 C -0.130 4.130 7 C -0.065 4.065 8 O -0.546 6.546 9 Si 0.684 3.316 10 C -0.057 4.057 11 C 0.035 3.965 12 F -0.120 7.120 13 C 0.072 3.928 14 H 0.094 0.906 15 C -0.150 4.150 16 C 0.080 3.920 17 H 0.074 0.926 18 O -0.551 6.551 19 C -0.128 4.128 20 H 0.089 0.911 21 H 0.090 0.910 22 H 0.042 0.958 23 H 0.155 0.845 24 H 0.080 0.920 25 H 0.386 0.614 26 H -0.250 1.250 27 H -0.246 1.246 28 H 0.155 0.845 29 H 0.076 0.924 30 H 0.092 0.908 31 H 0.383 0.617 32 H 0.103 0.897 33 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.680 2.854 0.625 3.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 N -0.183 5.183 3 C 0.062 3.938 4 N -0.195 5.195 5 C -0.040 4.040 6 C -0.133 4.133 7 C -0.176 4.176 8 O -0.352 6.352 9 Si 0.585 3.415 10 C -0.083 4.083 11 C 0.010 3.990 12 F -0.099 7.099 13 C -0.035 4.035 14 H 0.111 0.889 15 C -0.189 4.189 16 C 0.020 3.980 17 H 0.092 0.908 18 O -0.357 6.357 19 C -0.166 4.166 20 H 0.107 0.893 21 H 0.108 0.892 22 H 0.061 0.939 23 H 0.172 0.828 24 H 0.098 0.902 25 H 0.234 0.766 26 H -0.175 1.175 27 H -0.171 1.171 28 H 0.173 0.827 29 H 0.095 0.905 30 H 0.111 0.889 31 H 0.231 0.769 32 H 0.121 0.879 33 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 2.350 1.153 -0.240 2.628 hybrid contribution -0.223 0.434 0.731 0.879 sum 2.127 1.587 0.491 2.698 Atomic orbital electron populations 1.22709 0.83373 1.04606 1.02714 1.59457 1.09538 1.07274 1.42070 1.20006 0.94219 0.89559 0.90046 1.67674 1.11948 1.17937 1.21980 1.22267 0.97047 0.88276 0.96424 1.20131 1.00755 0.95829 0.96614 1.24546 0.95609 0.86972 1.10457 1.86484 1.32693 1.18894 1.97170 0.95024 0.79161 0.90102 0.77225 1.21383 0.94300 0.93929 0.98694 1.18098 0.96729 0.93979 0.90146 1.91475 1.67028 1.90994 1.60371 1.23149 0.96354 0.92226 0.91746 0.88867 1.23622 0.96713 0.96914 1.01622 1.22532 0.97111 0.96731 0.81648 0.90787 1.86461 1.36549 1.91709 1.20990 1.23251 0.96467 0.94524 1.02340 0.89264 0.89195 0.93950 0.82817 0.90190 0.76620 1.17481 1.17073 0.82745 0.90522 0.88940 0.76912 0.87882 0.90178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 9.00 60.06 0.54 0.55 16 2 N -0.47 -1.33 4.71 -172.41 -0.81 -2.14 16 3 C 0.30 1.16 6.35 -154.86 -0.98 0.18 16 4 N -0.48 -2.06 8.48 -12.36 -0.10 -2.17 16 5 C 0.12 0.35 9.84 -17.57 -0.17 0.18 16 6 C -0.13 -0.25 5.43 -104.47 -0.57 -0.81 16 7 C -0.06 0.07 2.83 36.01 0.10 0.17 16 8 O -0.55 0.47 12.76 -35.23 -0.45 0.02 16 9 Si 0.68 -1.38 29.82 -169.99 -5.07 -6.45 16 10 C -0.06 -0.12 9.75 -39.26 -0.38 -0.50 16 11 C 0.03 0.12 6.99 -39.09 -0.27 -0.16 16 12 F -0.12 -0.41 14.76 2.25 0.03 -0.38 16 13 C 0.07 0.17 2.49 -66.90 -0.17 0.01 16 14 H 0.09 0.40 7.63 -51.93 -0.40 0.00 16 15 C -0.15 -0.24 7.41 -25.92 -0.19 -0.43 16 16 C 0.08 0.05 5.28 -25.92 -0.14 -0.09 16 17 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 18 O -0.55 -0.84 13.59 -35.23 -0.48 -1.32 16 19 C -0.13 -0.10 6.44 -25.91 -0.17 -0.27 16 20 H 0.09 -0.04 7.05 -51.93 -0.37 -0.40 16 21 H 0.09 0.12 5.58 -51.93 -0.29 -0.17 16 22 H 0.04 0.06 8.14 -51.93 -0.42 -0.36 16 23 H 0.16 0.28 4.88 -52.49 -0.26 0.03 16 24 H 0.08 -0.23 7.96 -51.93 -0.41 -0.65 16 25 H 0.39 -2.27 8.74 45.56 0.40 -1.88 16 26 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 27 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 28 H 0.15 0.06 8.06 -52.48 -0.42 -0.36 16 29 H 0.08 0.18 8.14 -51.93 -0.42 -0.25 16 30 H 0.09 0.15 8.14 -51.93 -0.42 -0.27 16 31 H 0.38 -0.98 9.12 45.56 0.42 -0.56 16 32 H 0.10 -0.03 7.89 -51.93 -0.41 -0.44 16 33 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 LS Contribution 277.74 15.07 4.19 4.19 Total: 0.00 -6.97 277.74 -8.14 -15.11 By element: Atomic # 1 Polarization: -2.64 SS G_CDS: -3.05 Total: -5.70 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -2.40 Total: -1.17 kcal Atomic # 7 Polarization: -3.39 SS G_CDS: -0.92 Total: -4.31 kcal Atomic # 8 Polarization: -0.37 SS G_CDS: -0.93 Total: -1.30 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.03 Total: -0.38 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.07 Total: -6.45 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -6.97 -8.14 -15.11 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16977506_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.412 kcal (2) G-P(sol) polarization free energy of solvation -6.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.111 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds