Wall clock time and date at job start Mon Mar 8 2021 06:45:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86305 * 109.46717 * 2 1 4 4 C 1.50692 * 109.47366 * 240.00289 * 2 1 3 5 5 C 1.37984 * 120.32892 * 119.97363 * 4 2 1 6 6 N 1.32013 * 120.90036 * 179.76429 * 5 4 2 7 7 C 1.32343 * 121.64571 * 0.53021 * 6 5 4 8 8 N 1.39140 * 119.71781 * 179.75480 * 7 6 5 9 9 C 1.48635 * 111.00405 * 119.84913 * 8 7 6 10 10 C 1.54630 * 104.64892 * 201.42414 * 9 8 7 11 11 C 1.53352 * 104.66831 * 23.70748 * 10 9 8 12 12 C 1.52793 * 115.65790 * 129.28098 * 11 10 9 13 13 C 1.53961 * 86.78091 * 92.78366 * 12 11 10 14 14 O 1.42904 * 113.58441 * 270.02121 * 13 12 11 15 15 C 1.52968 * 115.55952 * 230.21299 * 11 10 9 16 16 C 1.48795 * 111.00026 * 4.21622 * 8 7 6 17 17 C 1.39339 * 120.56220 * 359.47172 * 7 6 5 18 18 F 1.35098 * 120.47481 * 180.28067 * 17 7 6 19 19 C 1.38442 * 119.05744 * 0.25742 * 17 7 6 20 20 H 0.96698 * 113.99748 * 299.99732 * 1 2 3 21 21 H 1.08999 * 109.47282 * 119.99725 * 2 1 3 22 22 H 1.48500 * 110.00108 * 300.00041 * 3 2 1 23 23 H 1.48498 * 110.00239 * 61.32170 * 3 2 1 24 24 H 1.07997 * 119.55266 * 0.02562 * 5 4 2 25 25 H 1.08997 * 110.40394 * 82.62720 * 9 8 7 26 26 H 1.09001 * 110.49809 * 320.26270 * 9 8 7 27 27 H 1.08993 * 110.39324 * 264.91032 * 10 9 8 28 28 H 1.08995 * 110.40030 * 142.50480 * 10 9 8 29 29 H 1.09000 * 113.65862 * 338.31155 * 12 11 10 30 30 H 1.09006 * 113.66402 * 207.25766 * 12 11 10 31 31 H 1.09002 * 113.58427 * 139.29177 * 13 12 11 32 32 H 0.96695 * 113.99595 * 178.56744 * 14 13 12 33 33 H 1.08997 * 113.66253 * 152.68656 * 15 11 10 34 34 H 1.08996 * 113.70936 * 21.57709 * 15 11 10 35 35 H 1.08996 * 110.45721 * 39.53896 * 16 8 7 36 36 H 1.08992 * 110.46238 * 276.96719 * 16 8 7 37 37 H 1.08004 * 120.75875 * 180.02562 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7246 -0.0460 -2.1433 6 7 3.1747 -0.6586 -3.2227 7 6 2.8780 -1.9228 -3.4782 8 7 3.3701 -2.5274 -4.6307 9 6 4.2210 -3.6992 -4.2958 10 6 5.1058 -3.9100 -5.5463 11 6 5.1395 -2.5396 -6.2337 12 6 6.5285 -2.0121 -6.5900 13 6 6.3278 -2.6658 -7.9695 14 8 6.7884 -4.0170 -8.0344 15 6 4.8122 -2.5426 -7.7279 16 6 4.2791 -1.6089 -5.3682 17 6 2.0819 -2.6552 -2.5999 18 9 1.7847 -3.9472 -2.8596 19 6 1.6000 -2.0401 -1.4570 20 1 -0.3933 0.4417 0.7651 21 1 1.7924 -0.5138 0.8900 22 1 1.5613 2.4680 -1.2085 23 1 1.5878 2.4586 1.2242 24 1 2.9843 0.9879 -1.9705 25 1 3.6027 -4.5785 -4.1152 26 1 4.8396 -3.4851 -3.4243 27 1 4.6604 -4.6549 -6.2056 28 1 6.1111 -4.2130 -5.2536 29 1 7.3306 -2.4623 -6.0051 30 1 6.5875 -0.9243 -6.6257 31 1 6.6884 -2.0558 -8.7977 32 1 6.6453 -4.4404 -8.8918 33 1 4.3872 -1.6044 -8.0846 34 1 4.2454 -3.4159 -8.0507 35 1 4.9043 -1.0509 -4.6712 36 1 3.7050 -0.9276 -5.9960 37 1 0.9810 -2.5820 -0.7573 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17058094_17656566.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:45:46 Heat of formation + Delta-G solvation = -32.069771 kcal Electronic energy + Delta-G solvation = -22460.247987 eV Core-core repulsion = 18927.322640 eV Total energy + Delta-G solvation = -3532.925348 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.121 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -49.87454 -42.04560 -41.01374 -38.67448 -37.70738 -35.61796 -33.66735 -32.42196 -30.58642 -28.86975 -26.88850 -26.46532 -24.91938 -23.50064 -22.59928 -22.18534 -19.81170 -18.83676 -18.62085 -18.36691 -18.03951 -17.92213 -16.98780 -16.50891 -16.45971 -15.85000 -15.71606 -15.39840 -15.27937 -15.08862 -14.42925 -14.34679 -14.14090 -14.05148 -13.89319 -13.73302 -13.27575 -12.88517 -12.73776 -12.58706 -12.43877 -12.10515 -11.76883 -11.45867 -11.16857 -11.09834 -10.82096 -10.62166 -10.57941 -10.53793 -9.17626 -5.09316 -0.24164 -0.00645 1.11456 1.48052 1.84386 2.26646 2.47584 3.03110 3.08117 3.12532 3.22908 3.39085 3.50116 3.57057 3.68139 3.75532 3.84897 3.93453 4.02405 4.15041 4.17161 4.34995 4.43885 4.46562 4.61523 4.68639 4.72164 4.77452 4.83278 4.86528 4.91120 4.95370 5.06430 5.11749 5.26520 5.29613 5.31464 5.51641 5.98323 6.29224 6.68290 6.69963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.069 4.069 3 Si 0.681 3.319 4 C -0.126 4.126 5 C 0.123 3.877 6 N -0.485 5.485 7 C 0.284 3.716 8 N -0.452 5.452 9 C 0.035 3.965 10 C -0.091 4.091 11 C -0.083 4.083 12 C -0.121 4.121 13 C 0.079 3.921 14 O -0.550 6.550 15 C -0.155 4.155 16 C 0.059 3.941 17 C 0.039 3.961 18 F -0.122 7.122 19 C -0.061 4.061 20 H 0.383 0.617 21 H 0.082 0.918 22 H -0.250 1.250 23 H -0.255 1.255 24 H 0.165 0.835 25 H 0.095 0.905 26 H 0.056 0.944 27 H 0.080 0.920 28 H 0.082 0.918 29 H 0.080 0.920 30 H 0.098 0.902 31 H 0.068 0.932 32 H 0.381 0.619 33 H 0.090 0.910 34 H 0.076 0.924 35 H 0.076 0.924 36 H 0.089 0.911 37 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.996 1.405 1.373 3.583 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.179 4.179 3 Si 0.581 3.419 4 C -0.129 4.129 5 C -0.034 4.034 6 N -0.198 5.198 7 C 0.050 3.950 8 N -0.169 5.169 9 C -0.090 4.090 10 C -0.128 4.128 11 C -0.084 4.084 12 C -0.158 4.158 13 C 0.019 3.981 14 O -0.355 6.355 15 C -0.193 4.193 16 C -0.067 4.067 17 C 0.015 3.985 18 F -0.101 7.101 19 C -0.088 4.088 20 H 0.232 0.768 21 H 0.100 0.900 22 H -0.174 1.174 23 H -0.180 1.180 24 H 0.182 0.818 25 H 0.114 0.886 26 H 0.074 0.926 27 H 0.099 0.901 28 H 0.100 0.900 29 H 0.098 0.902 30 H 0.116 0.884 31 H 0.086 0.914 32 H 0.229 0.771 33 H 0.109 0.891 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.107 0.893 37 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 3.120 2.268 0.470 3.886 hybrid contribution -1.573 -0.684 0.962 1.966 sum 1.547 1.585 1.431 2.637 Atomic orbital electron populations 1.86587 1.17466 1.80245 1.50014 1.24641 0.84756 1.11090 0.97398 0.95156 0.91461 0.74198 0.81064 1.20033 1.01052 0.93963 0.97851 1.22395 0.93431 0.99349 0.88223 1.67726 1.23084 1.08790 1.20178 1.20188 0.95073 0.89927 0.89793 1.62558 1.32553 1.07791 1.14034 1.23408 0.94399 0.92925 0.98316 1.22012 0.99850 0.95921 0.95054 1.21920 0.95713 0.95688 0.95083 1.23028 0.96545 1.00513 0.95723 1.22753 0.93620 0.83822 0.97857 1.86459 1.84044 1.25804 1.39229 1.23648 0.97247 1.03148 0.95217 1.22985 0.93411 0.94048 0.96241 1.18109 1.02745 0.80765 0.96887 1.91522 1.91562 1.33131 1.93849 1.21398 0.97172 0.94601 0.95611 0.76820 0.89992 1.17417 1.18005 0.81809 0.88640 0.92598 0.90092 0.89985 0.90173 0.88393 0.91422 0.77102 0.89106 0.90485 0.90580 0.89285 0.83040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.13 12.75 -35.23 -0.45 -0.58 16 2 C -0.07 0.08 2.83 36.00 0.10 0.18 16 3 Si 0.68 -1.36 29.82 -169.99 -5.07 -6.43 16 4 C -0.13 -0.11 5.43 -104.47 -0.57 -0.68 16 5 C 0.12 0.13 9.84 -17.57 -0.17 -0.04 16 6 N -0.49 -1.37 8.47 -12.37 -0.10 -1.48 16 7 C 0.28 0.95 6.24 -154.86 -0.97 -0.02 16 8 N -0.45 -1.25 5.34 -168.83 -0.90 -2.16 16 9 C 0.03 0.05 5.70 -2.01 -0.01 0.04 16 10 C -0.09 -0.05 5.77 -25.69 -0.15 -0.20 16 11 C -0.08 -0.02 1.18 -154.21 -0.18 -0.20 16 12 C -0.12 0.06 7.17 -26.34 -0.19 -0.13 16 13 C 0.08 -0.06 5.26 -25.74 -0.14 -0.19 16 14 O -0.55 -0.02 12.96 -35.23 -0.46 -0.47 16 15 C -0.15 0.08 7.16 -26.24 -0.19 -0.11 16 16 C 0.06 0.08 5.30 -2.53 -0.01 0.07 16 17 C 0.04 0.12 7.03 -39.10 -0.27 -0.15 16 18 F -0.12 -0.46 15.49 2.25 0.03 -0.42 16 19 C -0.06 -0.11 9.75 -39.26 -0.38 -0.49 16 20 H 0.38 -1.45 8.74 45.56 0.40 -1.06 16 21 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 22 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 23 H -0.26 0.01 7.11 56.52 0.40 0.41 16 24 H 0.17 -0.24 4.88 -52.49 -0.26 -0.49 16 25 H 0.10 0.14 7.01 -51.93 -0.36 -0.22 16 26 H 0.06 0.06 7.97 -51.93 -0.41 -0.35 16 27 H 0.08 0.07 7.77 -51.93 -0.40 -0.33 16 28 H 0.08 0.05 7.77 -51.93 -0.40 -0.36 16 29 H 0.08 0.02 7.88 -51.93 -0.41 -0.39 16 30 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.38 -1.39 9.12 45.56 0.42 -0.98 16 33 H 0.09 -0.09 7.98 -51.93 -0.41 -0.51 16 34 H 0.08 0.00 7.88 -51.93 -0.41 -0.41 16 35 H 0.08 0.12 7.19 -51.93 -0.37 -0.25 16 36 H 0.09 0.15 7.84 -51.93 -0.41 -0.26 16 37 H 0.15 0.06 8.06 -52.48 -0.42 -0.36 16 LS Contribution 302.05 15.07 4.55 4.55 Total: 0.00 -6.71 302.05 -9.44 -16.16 By element: Atomic # 1 Polarization: -3.32 SS G_CDS: -3.92 Total: -7.24 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -3.13 Total: -1.93 kcal Atomic # 7 Polarization: -2.63 SS G_CDS: -1.01 Total: -3.63 kcal Atomic # 8 Polarization: -0.15 SS G_CDS: -0.91 Total: -1.06 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.03 Total: -0.42 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.07 Total: -6.43 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -6.71 -9.44 -16.16 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058094_17656566.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.913 kcal (2) G-P(sol) polarization free energy of solvation -6.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.626 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.157 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds