Wall clock time and date at job start Mon Mar 8 2021 06:46:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52996 * 112.84946 * 2 1 4 4 O 1.42903 * 109.47379 * 48.80401 * 3 2 1 5 5 C 1.53779 * 113.61720 * 131.30586 * 2 1 3 6 6 C 1.53782 * 87.08402 * 139.97892 * 5 2 1 7 7 H 1.09000 * 113.68470 * 89.12703 * 6 5 2 8 8 N 1.46501 * 113.61439 * 220.02094 * 6 5 2 9 9 C 1.38409 * 119.99744 * 252.49493 * 8 6 5 10 10 N 1.32484 * 119.21494 * 180.02562 * 9 8 6 11 11 C 1.32280 * 120.74173 * 179.97438 * 10 9 8 12 12 C 1.38604 * 119.19325 * 359.97438 * 11 10 9 13 13 C 1.50700 * 120.71697 * 179.97438 * 12 11 10 14 14 O 1.42896 * 109.47341 * 300.00272 * 13 12 11 15 15 Si 1.86300 * 109.46849 * 180.02562 * 13 12 11 16 16 C 1.38601 * 118.56125 * 0.27661 * 12 11 10 17 17 N 1.32277 * 119.19335 * 359.44625 * 16 12 11 18 18 C 1.53781 * 113.61248 * 228.80222 * 2 1 3 19 19 H 1.09002 * 109.47401 * 191.19351 * 1 2 3 20 20 H 1.09000 * 109.47222 * 311.19936 * 1 2 3 21 21 H 1.09006 * 109.47447 * 71.19784 * 1 2 3 22 22 H 1.09000 * 109.47176 * 168.80848 * 3 2 1 23 23 H 1.09004 * 109.47172 * 288.80019 * 3 2 1 24 24 H 0.96700 * 114.00051 * 180.02562 * 4 3 2 25 25 H 1.09004 * 113.61293 * 25.42999 * 5 2 1 26 26 H 1.08994 * 113.61581 * 254.53066 * 5 2 1 27 27 H 0.96997 * 120.00005 * 72.50159 * 8 6 5 28 28 H 1.07995 * 120.40078 * 180.02562 * 11 10 9 29 29 H 1.09000 * 109.46989 * 60.00603 * 13 12 11 30 30 H 0.96693 * 114.00306 * 299.99773 * 14 13 12 31 31 H 1.48506 * 110.00048 * 58.68772 * 15 13 12 32 32 H 1.48502 * 109.99996 * 180.02562 * 15 13 12 33 33 H 1.08002 * 120.40316 * 179.72258 * 16 12 11 34 34 H 1.09007 * 113.60981 * 105.47207 * 18 2 1 35 35 H 1.08990 * 113.62005 * 334.56925 * 18 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1241 1.4099 0.0000 4 8 1.4913 2.1935 1.0138 5 6 2.1460 -0.9300 1.0584 6 6 3.1923 -1.3136 -0.0013 7 1 4.0717 -0.6695 -0.0016 8 7 3.5310 -2.7389 -0.0026 9 6 4.7585 -3.1590 0.4797 10 7 5.0488 -4.4516 0.4707 11 6 6.2130 -4.8863 0.9238 12 6 7.1331 -3.9713 1.4110 13 6 8.4696 -4.4288 1.9361 14 8 8.2699 -5.3213 3.0340 15 14 9.4507 -2.9518 2.5076 16 6 6.7949 -2.6272 1.4106 17 7 5.6157 -2.2588 0.9380 18 6 2.1459 -0.9281 -1.0602 19 1 -0.3634 -1.0081 0.1995 20 1 -0.3634 0.6769 0.7732 21 1 -0.3634 0.3312 -0.9729 22 1 3.1942 1.3533 0.1995 23 1 1.9600 1.8734 -0.9729 24 1 1.8191 3.1015 1.0709 25 1 1.4945 -1.7548 1.3473 26 1 2.5650 -0.4007 1.9141 27 1 2.8951 -3.3882 -0.3416 28 1 6.4441 -5.9412 0.9136 29 1 9.0144 -4.9429 1.1443 30 1 7.7904 -4.9299 3.7769 31 1 8.7040 -2.2244 3.5653 32 1 10.7713 -3.3894 3.0272 33 1 7.4876 -1.8892 1.7875 34 1 2.5650 -0.3970 -1.9150 35 1 1.4945 -1.7522 -1.3507 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17058580_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:23 Heat of formation + Delta-G solvation = 4.802769 kcal Electronic energy + Delta-G solvation = -18478.614595 eV Core-core repulsion = 15479.542365 eV Total energy + Delta-G solvation = -2999.072229 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 252.126 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -42.11364 -40.97559 -38.23994 -37.35202 -35.65485 -34.66643 -32.42864 -30.13025 -27.47064 -26.87409 -26.49866 -25.85843 -23.51764 -22.46032 -19.84692 -19.08827 -18.79150 -18.28231 -18.11356 -16.70319 -16.53021 -16.34638 -16.11149 -15.75275 -15.71348 -15.35979 -14.56540 -14.50943 -14.19047 -13.99913 -13.65192 -13.33966 -13.20127 -12.96233 -12.86037 -12.24384 -11.84648 -11.81232 -11.70625 -11.50745 -11.46173 -11.10634 -10.83526 -10.71092 -10.00769 -9.07036 -5.03748 0.08205 0.18206 1.21739 1.52213 1.84764 1.91207 2.82072 3.01434 3.16056 3.30704 3.38004 3.56000 3.63171 3.72107 3.75064 3.79773 3.95679 4.15664 4.21707 4.38115 4.46328 4.52534 4.55442 4.66597 4.71418 4.75289 4.78400 4.90652 5.05613 5.12975 5.17480 5.36429 5.43907 5.81630 6.03095 6.33941 6.43564 6.65444 7.31713 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.081 4.081 3 C 0.097 3.903 4 O -0.569 6.569 5 C -0.140 4.140 6 C 0.137 3.863 7 H 0.120 0.880 8 N -0.684 5.684 9 C 0.568 3.432 10 N -0.570 5.570 11 C 0.223 3.777 12 C -0.294 4.294 13 C -0.052 4.052 14 O -0.530 6.530 15 Si 0.677 3.323 16 C 0.199 3.801 17 N -0.563 5.563 18 C -0.136 4.136 19 H 0.054 0.946 20 H 0.068 0.932 21 H 0.055 0.945 22 H 0.050 0.950 23 H 0.050 0.950 24 H 0.381 0.619 25 H 0.085 0.915 26 H 0.075 0.925 27 H 0.415 0.585 28 H 0.170 0.830 29 H 0.120 0.880 30 H 0.376 0.624 31 H -0.258 1.258 32 H -0.253 1.253 33 H 0.166 0.834 34 H 0.078 0.922 35 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.829 2.927 -2.370 3.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.082 4.082 3 C 0.020 3.980 4 O -0.374 6.374 5 C -0.179 4.179 6 C 0.031 3.969 7 H 0.138 0.862 8 N -0.319 5.319 9 C 0.211 3.789 10 N -0.292 5.292 11 C 0.055 3.945 12 C -0.302 4.302 13 C -0.164 4.164 14 O -0.336 6.336 15 Si 0.578 3.422 16 C 0.032 3.968 17 N -0.285 5.285 18 C -0.175 4.175 19 H 0.074 0.926 20 H 0.087 0.913 21 H 0.074 0.926 22 H 0.068 0.932 23 H 0.068 0.932 24 H 0.228 0.772 25 H 0.104 0.896 26 H 0.094 0.906 27 H 0.253 0.747 28 H 0.187 0.813 29 H 0.138 0.862 30 H 0.224 0.776 31 H -0.182 1.182 32 H -0.177 1.177 33 H 0.183 0.817 34 H 0.097 0.903 35 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 0.259 2.863 -2.367 3.723 hybrid contribution 0.195 -0.597 0.913 1.108 sum 0.454 2.266 -1.454 2.730 Atomic orbital electron populations 1.21597 0.92888 1.01976 1.02350 1.21549 0.96673 0.92832 0.97096 1.21911 0.95269 0.90142 0.90715 1.86463 1.66025 1.27537 1.57411 1.23601 0.97727 0.98946 0.97659 1.22648 0.97192 0.80632 0.96433 0.86183 1.44246 1.13340 1.08318 1.65961 1.19452 0.87203 0.84926 0.87275 1.68003 1.21958 1.15318 1.23876 1.22840 0.85795 1.00379 0.85474 1.21644 1.01126 0.96063 1.11383 1.24669 0.96548 1.03354 0.91802 1.86605 1.79066 1.39750 1.28190 0.95270 0.79690 0.79324 0.87921 1.22785 0.91224 0.93755 0.89085 1.67903 1.04502 1.37844 1.18245 1.23497 0.97516 0.99372 0.97089 0.92647 0.91280 0.92582 0.93167 0.93201 0.77164 0.89599 0.90614 0.74747 0.81266 0.86198 0.77644 1.18246 1.17740 0.81705 0.90319 0.88840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.01 9.08 37.16 0.34 0.34 16 2 C -0.08 0.05 1.19 -153.70 -0.18 -0.13 16 3 C 0.10 -0.10 6.39 37.16 0.24 0.14 16 4 O -0.57 -0.07 12.64 -35.23 -0.45 -0.52 16 5 C -0.14 -0.02 6.99 -25.92 -0.18 -0.20 16 6 C 0.14 -0.05 3.90 -67.12 -0.26 -0.31 16 7 H 0.12 0.04 6.89 -51.93 -0.36 -0.32 16 8 N -0.68 -0.50 5.50 -55.00 -0.30 -0.80 16 9 C 0.57 1.54 8.42 -322.82 -2.72 -1.18 16 10 N -0.57 -1.68 10.46 -13.93 -0.15 -1.82 16 11 C 0.22 0.26 10.92 -17.22 -0.19 0.07 16 12 C -0.29 0.01 5.40 -104.35 -0.56 -0.56 16 13 C -0.05 0.06 2.85 36.01 0.10 0.16 16 14 O -0.53 -0.17 12.79 -35.23 -0.45 -0.62 16 15 Si 0.68 -1.23 29.87 -169.99 -5.08 -6.31 16 16 C 0.20 0.08 9.92 -17.23 -0.17 -0.09 16 17 N -0.56 -1.33 9.13 -13.93 -0.13 -1.45 16 18 C -0.14 0.23 6.98 -25.92 -0.18 0.05 16 19 H 0.05 -0.02 7.94 -51.93 -0.41 -0.44 16 20 H 0.07 0.10 7.32 -51.93 -0.38 -0.28 16 21 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 22 H 0.05 -0.08 7.35 -51.93 -0.38 -0.46 16 23 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 24 H 0.38 -1.48 9.12 45.56 0.42 -1.07 16 25 H 0.09 0.03 7.96 -51.93 -0.41 -0.38 16 26 H 0.08 0.11 8.10 -51.93 -0.42 -0.31 16 27 H 0.41 -0.15 8.84 -40.82 -0.36 -0.51 16 28 H 0.17 -0.10 8.06 -52.49 -0.42 -0.52 16 29 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 30 H 0.38 -0.82 8.70 45.56 0.40 -0.42 16 31 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 32 H -0.25 -0.40 7.11 56.52 0.40 0.01 16 33 H 0.17 -0.35 5.04 -52.49 -0.26 -0.61 16 34 H 0.08 -0.17 8.10 -51.93 -0.42 -0.59 16 35 H 0.09 -0.20 8.08 -51.93 -0.42 -0.62 16 LS Contribution 292.40 15.07 4.41 4.41 Total: 0.00 -6.81 292.40 -9.81 -16.62 By element: Atomic # 1 Polarization: -3.91 SS G_CDS: -3.90 Total: -7.80 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -3.77 Total: -1.71 kcal Atomic # 7 Polarization: -3.50 SS G_CDS: -0.58 Total: -4.08 kcal Atomic # 8 Polarization: -0.24 SS G_CDS: -0.90 Total: -1.14 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.08 Total: -6.31 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -6.81 -9.81 -16.62 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.427 kcal (2) G-P(sol) polarization free energy of solvation -6.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.624 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.803 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds