Wall clock time and date at job start Mon Mar 8 2021 06:46:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52996 * 112.84880 * 2 1 4 4 O 1.42904 * 109.47596 * 311.20026 * 3 2 1 5 5 C 1.53780 * 113.61237 * 131.19980 * 2 1 3 6 6 C 1.53777 * 87.08194 * 89.11598 * 5 2 1 7 7 H 1.09001 * 113.61854 * 140.06216 * 6 5 2 8 8 N 1.46500 * 113.61404 * 270.88203 * 6 5 2 9 9 C 1.38998 * 120.00452 * 195.04530 * 8 6 5 10 10 N 1.32394 * 119.71030 * 179.97438 * 9 8 6 11 11 C 1.31975 * 121.62221 * 179.97438 * 10 9 8 12 12 C 1.38018 * 120.85820 * 0.04807 * 11 10 9 13 13 C 1.50697 * 120.33503 * 180.24765 * 12 11 10 14 14 O 1.42901 * 109.47001 * 119.72135 * 13 12 11 15 15 Si 1.86299 * 109.47337 * 359.72291 * 13 12 11 16 16 C 1.38884 * 119.32961 * 359.97438 * 12 11 10 17 17 C 1.38304 * 118.50619 * 359.97438 * 16 12 11 18 18 C 1.53785 * 87.17485 * 25.47219 * 6 5 2 19 19 H 1.09005 * 109.47161 * 281.68866 * 1 2 3 20 20 H 1.09001 * 109.47199 * 41.68561 * 1 2 3 21 21 H 1.08999 * 109.47281 * 161.69086 * 1 2 3 22 22 H 1.09003 * 109.47105 * 71.20103 * 3 2 1 23 23 H 1.09000 * 109.47215 * 191.20026 * 3 2 1 24 24 H 0.96693 * 114.00583 * 180.02562 * 4 3 2 25 25 H 1.08999 * 113.61590 * 334.55944 * 5 2 1 26 26 H 1.09006 * 113.61042 * 203.66484 * 5 2 1 27 27 H 0.97004 * 119.99965 * 15.04423 * 8 6 5 28 28 H 1.08004 * 119.56672 * 180.02562 * 11 10 9 29 29 H 1.09001 * 109.47424 * 239.72037 * 13 12 11 30 30 H 0.96696 * 114.00162 * 300.00109 * 14 13 12 31 31 H 1.48491 * 110.00321 * 179.97438 * 15 13 12 32 32 H 1.48494 * 109.99851 * 301.32034 * 15 13 12 33 33 H 1.07998 * 120.74396 * 179.97438 * 16 12 11 34 34 H 1.07993 * 120.44825 * 180.02562 * 17 16 12 35 35 H 1.08994 * 113.61444 * 89.07715 * 18 6 5 36 36 H 1.08999 * 113.61335 * 219.97953 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1241 1.4099 0.0000 4 8 1.4913 2.1936 -1.0137 5 6 2.1460 -0.9281 1.0602 6 6 2.0929 -2.0425 0.0019 7 1 2.9710 -2.6884 0.0034 8 7 0.8348 -2.7930 0.0026 9 6 0.7508 -4.0097 -0.6642 10 7 -0.3889 -4.6834 -0.6594 11 6 -0.5108 -5.8415 -1.2804 12 6 0.5545 -6.3955 -1.9609 13 6 0.4006 -7.7159 -2.6706 14 8 0.6597 -7.5404 -4.0649 15 14 -1.3362 -8.3481 -2.4365 16 6 1.7681 -5.7209 -1.9899 17 6 1.8655 -4.5088 -1.3310 18 6 2.1470 -0.9318 -1.0603 19 1 -0.3634 0.2082 1.0064 20 1 -0.3634 0.7675 -0.6834 21 1 -0.3634 -0.9756 -0.3228 22 1 1.9600 1.8733 0.9729 23 1 3.1942 1.3533 -0.1996 24 1 1.8195 3.1013 -1.0714 25 1 1.4945 -1.1068 1.9156 26 1 3.1591 -0.6486 1.3496 27 1 0.0602 -2.4409 0.4684 28 1 -1.4564 -6.3627 -1.2553 29 1 1.1077 -8.4352 -2.2574 30 1 0.0665 -6.9122 -4.4992 31 1 -1.5012 -9.6495 -3.1322 32 1 -1.6290 -8.5045 -0.9892 33 1 2.6167 -6.1335 -2.5152 34 1 2.7941 -3.9575 -1.3336 35 1 3.1603 -0.6534 -1.3497 36 1 1.4963 -1.1136 -1.9157 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17058580_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:26 Heat of formation + Delta-G solvation = -4.993766 kcal Electronic energy + Delta-G solvation = -18502.599055 eV Core-core repulsion = 15568.527927 eV Total energy + Delta-G solvation = -2934.071128 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.131 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.76369 -40.77654 -37.97232 -37.37213 -35.22400 -33.34160 -31.41045 -30.28200 -27.67008 -26.94548 -26.18784 -24.78016 -23.26378 -21.97164 -19.60741 -18.91648 -18.41371 -18.30494 -17.39889 -16.60115 -16.44588 -16.26508 -15.99926 -15.68175 -15.26815 -15.08290 -14.51003 -14.40265 -14.13475 -14.00952 -13.72134 -13.38473 -13.19765 -13.04980 -12.52015 -12.34589 -11.96690 -11.87737 -11.66116 -11.35363 -11.02034 -10.83837 -10.64675 -10.36594 -10.33373 -8.66492 -5.00651 0.28466 0.46410 1.33927 1.65494 2.00335 2.02891 2.88125 3.04747 3.32095 3.48294 3.50998 3.60356 3.68082 3.81330 3.89284 4.04030 4.08544 4.13468 4.31707 4.38343 4.43978 4.46952 4.55883 4.57776 4.65016 4.77171 4.78392 4.87340 5.01182 5.05649 5.06421 5.15537 5.34988 5.40899 5.57625 6.04794 6.54316 6.61846 6.63761 7.19160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.081 4.081 3 C 0.090 3.910 4 O -0.569 6.569 5 C -0.135 4.135 6 C 0.130 3.870 7 H 0.095 0.905 8 N -0.704 5.704 9 C 0.409 3.591 10 N -0.540 5.540 11 C 0.156 3.844 12 C -0.236 4.236 13 C -0.052 4.052 14 O -0.543 6.543 15 Si 0.682 3.318 16 C -0.006 4.006 17 C -0.237 4.237 18 C -0.144 4.144 19 H 0.056 0.944 20 H 0.072 0.928 21 H 0.063 0.937 22 H 0.046 0.954 23 H 0.047 0.953 24 H 0.379 0.621 25 H 0.079 0.921 26 H 0.099 0.901 27 H 0.408 0.592 28 H 0.155 0.845 29 H 0.112 0.888 30 H 0.378 0.622 31 H -0.253 1.253 32 H -0.256 1.256 33 H 0.135 0.865 34 H 0.134 0.866 35 H 0.091 0.909 36 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.528 3.567 0.714 3.946 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.081 4.081 3 C 0.012 3.988 4 O -0.375 6.375 5 C -0.173 4.173 6 C 0.024 3.976 7 H 0.113 0.887 8 N -0.338 5.338 9 C 0.174 3.826 10 N -0.257 5.257 11 C -0.002 4.002 12 C -0.241 4.241 13 C -0.164 4.164 14 O -0.348 6.348 15 Si 0.584 3.416 16 C -0.032 4.032 17 C -0.261 4.261 18 C -0.183 4.183 19 H 0.075 0.925 20 H 0.091 0.909 21 H 0.082 0.918 22 H 0.064 0.936 23 H 0.066 0.934 24 H 0.226 0.774 25 H 0.098 0.902 26 H 0.118 0.882 27 H 0.247 0.753 28 H 0.171 0.829 29 H 0.129 0.871 30 H 0.226 0.774 31 H -0.178 1.178 32 H -0.181 1.181 33 H 0.153 0.847 34 H 0.152 0.848 35 H 0.109 0.891 36 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 0.625 2.360 1.515 2.874 hybrid contribution 1.424 0.439 0.142 1.497 sum 2.049 2.800 1.657 3.845 Atomic orbital electron populations 1.21698 0.92421 1.02853 1.02294 1.21916 0.96717 0.92591 0.96886 1.22114 0.95169 0.90945 0.90549 1.86482 1.66003 1.27506 1.57499 1.23402 1.02537 0.94560 0.96824 1.21789 0.86728 0.91905 0.97225 0.88733 1.44459 1.13795 1.18656 1.56925 1.18378 0.89292 0.86144 0.88830 1.67127 1.24862 1.09571 1.24111 1.22200 0.97251 0.89954 0.90793 1.20985 0.95980 1.00510 1.06652 1.24777 1.11972 0.96353 0.83296 1.86486 1.61508 1.67169 1.19638 0.94831 0.80025 0.84332 0.82409 1.21188 0.96806 0.92280 0.92900 1.21489 0.99442 0.99512 1.05682 1.23654 1.01758 0.95376 0.97489 0.92460 0.90874 0.91828 0.93575 0.93448 0.77358 0.90211 0.88225 0.75339 0.82879 0.87109 0.77432 1.17823 1.18104 0.84676 0.84848 0.89098 0.90518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.01 8.64 37.16 0.32 0.33 16 2 C -0.08 0.09 1.20 -153.55 -0.18 -0.09 16 3 C 0.09 -0.12 6.52 37.16 0.24 0.12 16 4 O -0.57 -0.03 12.54 -35.23 -0.44 -0.47 16 5 C -0.14 0.32 6.97 -25.92 -0.18 0.14 16 6 C 0.13 -0.19 3.82 -67.12 -0.26 -0.45 16 7 H 0.09 -0.20 6.60 -51.93 -0.34 -0.54 16 8 N -0.70 -0.18 4.60 -53.14 -0.24 -0.42 16 9 C 0.41 0.84 7.65 -155.03 -1.19 -0.34 16 10 N -0.54 -1.68 10.39 -12.44 -0.13 -1.81 16 11 C 0.16 0.24 9.84 -17.57 -0.17 0.07 16 12 C -0.24 -0.22 5.40 -104.46 -0.56 -0.78 16 13 C -0.05 -0.01 2.84 36.00 0.10 0.09 16 14 O -0.54 -0.28 12.78 -35.23 -0.45 -0.73 16 15 Si 0.68 -0.45 29.82 -169.99 -5.07 -5.52 16 16 C -0.01 -0.01 9.77 -39.32 -0.38 -0.39 16 17 C -0.24 -0.25 9.27 -39.22 -0.36 -0.61 16 18 C -0.14 0.14 7.00 -25.77 -0.18 -0.04 16 19 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 20 H 0.07 0.12 7.14 -51.93 -0.37 -0.26 16 21 H 0.06 0.01 5.31 -51.93 -0.28 -0.26 16 22 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 23 H 0.05 -0.11 7.95 -51.93 -0.41 -0.52 16 24 H 0.38 -1.48 9.12 45.56 0.42 -1.06 16 25 H 0.08 -0.17 8.10 -51.93 -0.42 -0.59 16 26 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 27 H 0.41 0.07 6.71 -40.82 -0.27 -0.20 16 28 H 0.15 -0.07 4.88 -52.48 -0.26 -0.33 16 29 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 30 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 31 H -0.25 -0.63 7.11 56.52 0.40 -0.22 16 32 H -0.26 -0.43 7.11 56.52 0.40 -0.02 16 33 H 0.14 -0.01 8.06 -52.49 -0.42 -0.44 16 34 H 0.13 -0.09 6.24 -52.49 -0.33 -0.41 16 35 H 0.09 -0.17 7.97 -51.93 -0.41 -0.58 16 36 H 0.08 0.07 8.10 -51.93 -0.42 -0.35 16 LS Contribution 290.49 15.07 4.38 4.38 Total: 0.00 -6.45 290.49 -8.77 -15.22 By element: Atomic # 1 Polarization: -4.68 SS G_CDS: -4.00 Total: -8.69 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -2.81 Total: -1.95 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: -0.37 Total: -2.23 kcal Atomic # 8 Polarization: -0.31 SS G_CDS: -0.89 Total: -1.20 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.07 Total: -5.52 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -6.45 -8.77 -15.22 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.223 kcal (2) G-P(sol) polarization free energy of solvation -6.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.766 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.217 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds