Wall clock time and date at job start Mon Mar 8 2021 06:46:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52996 * 112.84880 * 2 1 4 4 O 1.42904 * 109.47596 * 311.20026 * 3 2 1 5 5 C 1.53780 * 113.61237 * 131.19980 * 2 1 3 6 6 C 1.53777 * 87.08194 * 89.11598 * 5 2 1 7 7 H 1.09001 * 113.61854 * 140.06216 * 6 5 2 8 8 N 1.46500 * 113.61404 * 270.88203 * 6 5 2 9 9 C 1.38998 * 120.00452 * 195.04530 * 8 6 5 10 10 N 1.32394 * 119.71030 * 179.97438 * 9 8 6 11 11 C 1.31975 * 121.62221 * 179.97438 * 10 9 8 12 12 C 1.38018 * 120.85820 * 0.04807 * 11 10 9 13 13 C 1.50697 * 120.33503 * 180.24765 * 12 11 10 14 14 O 1.42901 * 109.47001 * 119.72135 * 13 12 11 15 15 Si 1.86299 * 109.47337 * 359.72291 * 13 12 11 16 16 C 1.38884 * 119.32961 * 359.97438 * 12 11 10 17 17 C 1.38304 * 118.50619 * 359.97438 * 16 12 11 18 18 C 1.53785 * 87.17485 * 25.47219 * 6 5 2 19 19 H 1.09005 * 109.47161 * 281.68866 * 1 2 3 20 20 H 1.09001 * 109.47199 * 41.68561 * 1 2 3 21 21 H 1.08999 * 109.47281 * 161.69086 * 1 2 3 22 22 H 1.09003 * 109.47105 * 71.20103 * 3 2 1 23 23 H 1.09000 * 109.47215 * 191.20026 * 3 2 1 24 24 H 0.96693 * 114.00583 * 180.02562 * 4 3 2 25 25 H 1.08999 * 113.61590 * 334.55944 * 5 2 1 26 26 H 1.09006 * 113.61042 * 203.66484 * 5 2 1 27 27 H 0.97004 * 119.99965 * 15.04423 * 8 6 5 28 28 H 1.08004 * 119.56672 * 180.02562 * 11 10 9 29 29 H 1.09001 * 109.47424 * 239.72037 * 13 12 11 30 30 H 0.96696 * 114.00162 * 300.00109 * 14 13 12 31 31 H 1.48491 * 110.00321 * 179.97438 * 15 13 12 32 32 H 1.48494 * 109.99851 * 301.32034 * 15 13 12 33 33 H 1.07998 * 120.74396 * 179.97438 * 16 12 11 34 34 H 1.07993 * 120.44825 * 180.02562 * 17 16 12 35 35 H 1.08994 * 113.61444 * 89.07715 * 18 6 5 36 36 H 1.08999 * 113.61335 * 219.97953 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1241 1.4099 0.0000 4 8 1.4913 2.1936 -1.0137 5 6 2.1460 -0.9281 1.0602 6 6 2.0929 -2.0425 0.0019 7 1 2.9710 -2.6884 0.0034 8 7 0.8348 -2.7930 0.0026 9 6 0.7508 -4.0097 -0.6642 10 7 -0.3889 -4.6834 -0.6594 11 6 -0.5108 -5.8415 -1.2804 12 6 0.5545 -6.3955 -1.9609 13 6 0.4006 -7.7159 -2.6706 14 8 0.6597 -7.5404 -4.0649 15 14 -1.3362 -8.3481 -2.4365 16 6 1.7681 -5.7209 -1.9899 17 6 1.8655 -4.5088 -1.3310 18 6 2.1470 -0.9318 -1.0603 19 1 -0.3634 0.2082 1.0064 20 1 -0.3634 0.7675 -0.6834 21 1 -0.3634 -0.9756 -0.3228 22 1 1.9600 1.8733 0.9729 23 1 3.1942 1.3533 -0.1996 24 1 1.8195 3.1013 -1.0714 25 1 1.4945 -1.1068 1.9156 26 1 3.1591 -0.6486 1.3496 27 1 0.0602 -2.4409 0.4684 28 1 -1.4564 -6.3627 -1.2553 29 1 1.1077 -8.4352 -2.2574 30 1 0.0665 -6.9122 -4.4992 31 1 -1.5012 -9.6495 -3.1322 32 1 -1.6290 -8.5045 -0.9892 33 1 2.6167 -6.1335 -2.5152 34 1 2.7941 -3.9575 -1.3336 35 1 3.1603 -0.6534 -1.3497 36 1 1.4963 -1.1136 -1.9157 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17058580_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:25 Heat of formation + Delta-G solvation = -4.967024 kcal Electronic energy + Delta-G solvation = -18502.597895 eV Core-core repulsion = 15568.527927 eV Total energy + Delta-G solvation = -2934.069968 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.131 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.74285 -40.75299 -37.97412 -37.30950 -35.21799 -33.40768 -31.42147 -30.25031 -27.60467 -26.81812 -26.19412 -24.82209 -23.25715 -21.95170 -19.51745 -18.92336 -18.41766 -18.22787 -17.40447 -16.54720 -16.47275 -16.20982 -16.01255 -15.60393 -15.26928 -15.09804 -14.48184 -14.40032 -14.15373 -14.04807 -13.69091 -13.33092 -13.12918 -13.03510 -12.46237 -12.36774 -12.11426 -11.77589 -11.60385 -11.24618 -10.97856 -10.79955 -10.65055 -10.41972 -10.38213 -8.68750 -4.98931 0.22056 0.39390 1.34200 1.63435 1.96580 2.05502 2.81746 3.21057 3.44675 3.54647 3.59846 3.63601 3.77157 3.78691 3.96006 4.07062 4.10931 4.20623 4.34339 4.45538 4.54423 4.58422 4.60440 4.74830 4.76475 4.77591 4.87591 4.92868 5.00214 5.06982 5.13388 5.23268 5.32371 5.40250 5.57028 6.05727 6.51118 6.78810 6.91301 7.13133 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.086 4.086 3 C 0.087 3.913 4 O -0.593 6.593 5 C -0.124 4.124 6 C 0.128 3.872 7 H 0.105 0.895 8 N -0.703 5.703 9 C 0.395 3.605 10 N -0.566 5.566 11 C 0.145 3.855 12 C -0.237 4.237 13 C -0.054 4.054 14 O -0.556 6.556 15 Si 0.764 3.236 16 C -0.013 4.013 17 C -0.240 4.240 18 C -0.142 4.142 19 H 0.061 0.939 20 H 0.052 0.948 21 H 0.057 0.943 22 H 0.052 0.948 23 H 0.061 0.939 24 H 0.394 0.606 25 H 0.079 0.921 26 H 0.119 0.881 27 H 0.406 0.594 28 H 0.167 0.833 29 H 0.108 0.892 30 H 0.394 0.606 31 H -0.295 1.295 32 H -0.286 1.286 33 H 0.145 0.855 34 H 0.149 0.851 35 H 0.103 0.897 36 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.437 3.948 0.951 4.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.087 4.087 3 C 0.010 3.990 4 O -0.401 6.401 5 C -0.162 4.162 6 C 0.022 3.978 7 H 0.123 0.877 8 N -0.336 5.336 9 C 0.159 3.841 10 N -0.284 5.284 11 C -0.012 4.012 12 C -0.242 4.242 13 C -0.165 4.165 14 O -0.364 6.364 15 Si 0.671 3.329 16 C -0.038 4.038 17 C -0.264 4.264 18 C -0.181 4.181 19 H 0.080 0.920 20 H 0.072 0.928 21 H 0.076 0.924 22 H 0.070 0.930 23 H 0.079 0.921 24 H 0.243 0.757 25 H 0.098 0.902 26 H 0.137 0.863 27 H 0.244 0.756 28 H 0.184 0.816 29 H 0.125 0.875 30 H 0.243 0.757 31 H -0.223 1.223 32 H -0.213 1.213 33 H 0.163 0.837 34 H 0.167 0.833 35 H 0.121 0.879 36 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 1.547 2.787 1.742 3.632 hybrid contribution 1.136 0.330 0.048 1.184 sum 2.683 3.117 1.790 4.486 Atomic orbital electron populations 1.21638 0.93585 1.01751 1.01959 1.21951 0.95887 0.93263 0.97557 1.22207 0.95737 0.90527 0.90561 1.86447 1.66776 1.28840 1.58063 1.23382 1.03432 0.93215 0.96126 1.21911 0.86325 0.92045 0.97479 0.87692 1.44565 1.14380 1.18237 1.56453 1.18635 0.89446 0.86690 0.89289 1.67131 1.25710 1.10403 1.25109 1.22453 0.98073 0.89849 0.90811 1.21046 0.95921 1.00694 1.06530 1.24841 1.12450 0.95945 0.83245 1.86449 1.62397 1.67864 1.19691 0.93826 0.78380 0.81662 0.79045 1.21395 0.97176 0.92353 0.92897 1.21670 0.99773 0.99647 1.05320 1.23643 1.01877 0.95786 0.96750 0.91969 0.92843 0.92406 0.92958 0.92102 0.75684 0.90221 0.86314 0.75550 0.81618 0.87490 0.75655 1.22301 1.21341 0.83677 0.83316 0.87913 0.92777 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.10 8.64 71.98 0.62 0.53 16 2 C -0.09 0.20 1.20 -51.56 -0.06 0.14 16 3 C 0.09 -0.28 6.52 71.98 0.47 0.19 16 4 O -0.59 -0.15 12.54 -148.98 -1.87 -2.02 16 5 C -0.12 0.71 6.97 31.12 0.22 0.93 16 6 C 0.13 -0.44 3.82 45.52 0.17 -0.26 16 7 H 0.11 -0.57 6.60 -2.39 -0.02 -0.58 16 8 N -0.70 -0.62 4.60 -322.05 -1.48 -2.10 16 9 C 0.40 1.81 7.65 133.07 1.02 2.82 16 10 N -0.57 -3.94 10.39 -193.27 -2.01 -5.95 16 11 C 0.15 0.51 9.84 84.62 0.83 1.35 16 12 C -0.24 -0.47 5.40 -19.76 -0.11 -0.58 16 13 C -0.05 -0.02 2.84 71.24 0.20 0.19 16 14 O -0.56 -0.41 12.78 -148.98 -1.90 -2.31 16 15 Si 0.76 -0.74 29.82 68.60 2.05 1.30 16 16 C -0.01 -0.02 9.77 22.44 0.22 0.20 16 17 C -0.24 -0.48 9.27 22.50 0.21 -0.27 16 18 C -0.14 0.29 7.00 31.21 0.22 0.51 16 19 H 0.06 -0.04 8.14 -2.38 -0.02 -0.06 16 20 H 0.05 0.25 7.14 -2.39 -0.02 0.24 16 21 H 0.06 0.10 5.31 -2.39 -0.01 0.09 16 22 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 23 H 0.06 -0.37 7.95 -2.39 -0.02 -0.39 16 24 H 0.39 -3.05 9.12 -74.06 -0.68 -3.72 16 25 H 0.08 -0.42 8.10 -2.39 -0.02 -0.44 16 26 H 0.12 -1.10 8.10 -2.38 -0.02 -1.12 16 27 H 0.41 0.46 6.71 -92.70 -0.62 -0.16 16 28 H 0.17 -0.09 4.88 -2.91 -0.01 -0.11 16 29 H 0.11 0.11 7.96 -2.39 -0.02 0.09 16 30 H 0.39 -2.64 8.70 -74.06 -0.64 -3.28 16 31 H -0.30 -1.78 7.11 99.48 0.71 -1.08 16 32 H -0.29 -1.15 7.11 99.48 0.71 -0.44 16 33 H 0.15 -0.09 8.06 -2.91 -0.02 -0.12 16 34 H 0.15 -0.29 6.24 -2.91 -0.02 -0.31 16 35 H 0.10 -0.47 7.97 -2.39 -0.02 -0.49 16 36 H 0.05 0.15 8.10 -2.39 -0.02 0.13 16 Total: 0.00 -15.37 290.49 -1.99 -17.36 By element: Atomic # 1 Polarization: -11.24 SS G_CDS: -0.78 Total: -12.02 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: 4.01 Total: 5.74 kcal Atomic # 7 Polarization: -4.56 SS G_CDS: -3.49 Total: -8.05 kcal Atomic # 8 Polarization: -0.56 SS G_CDS: -3.77 Total: -4.33 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: 2.05 Total: 1.30 kcal Total: -15.37 -1.99 -17.36 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.391 kcal (2) G-P(sol) polarization free energy of solvation -15.372 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds