Wall clock time and date at job start Mon Mar 8 2021 06:46:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53006 * 112.90339 * 2 1 4 4 O 1.42905 * 109.47124 * 311.25403 * 3 2 1 5 5 C 1.53774 * 113.62058 * 131.24970 * 2 1 3 6 6 C 1.53785 * 87.17034 * 89.15755 * 5 2 1 7 7 H 1.09000 * 113.61223 * 139.94055 * 6 5 2 8 8 N 1.46500 * 113.61819 * 270.84431 * 6 5 2 9 9 C 1.38613 * 120.00100 * 196.69491 * 8 6 5 10 10 N 1.29689 * 124.94743 * 0.02562 * 9 8 6 11 11 C 1.32115 * 116.86594 * 179.97438 * 10 9 8 12 12 C 1.33331 * 114.57801 * 0.02562 * 11 10 9 13 13 C 1.50710 * 125.95137 * 180.02562 * 12 11 10 14 14 O 1.42907 * 109.46883 * 300.00119 * 13 12 11 15 15 Si 1.86292 * 109.47044 * 179.97438 * 13 12 11 16 16 S 1.70962 * 124.94962 * 179.72158 * 9 8 6 17 17 C 1.53774 * 87.07932 * 25.39480 * 6 5 2 18 18 H 1.09005 * 109.46938 * 281.31003 * 1 2 3 19 19 H 1.09001 * 109.47414 * 41.31542 * 1 2 3 20 20 H 1.09005 * 109.46816 * 161.31440 * 1 2 3 21 21 H 1.08997 * 109.47130 * 71.25484 * 3 2 1 22 22 H 1.08996 * 109.47239 * 191.25145 * 3 2 1 23 23 H 0.96706 * 113.99649 * 180.02562 * 4 3 2 24 24 H 1.09003 * 113.61178 * 334.57589 * 5 2 1 25 25 H 1.08997 * 113.61711 * 203.75104 * 5 2 1 26 26 H 0.96998 * 119.99845 * 16.69249 * 8 6 5 27 27 H 1.07998 * 122.71230 * 180.02562 * 11 10 9 28 28 H 1.09001 * 109.47041 * 59.99683 * 13 12 11 29 29 H 0.96696 * 113.99678 * 179.97438 * 14 13 12 30 30 H 1.48502 * 109.99866 * 59.99948 * 15 13 12 31 31 H 1.48504 * 109.99967 * 181.31702 * 15 13 12 32 32 H 1.09001 * 113.62137 * 89.11848 * 17 6 5 33 33 H 1.09007 * 113.61392 * 220.01524 * 17 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1255 1.4094 0.0000 4 8 1.4925 2.1940 -1.0129 5 6 2.1462 -0.9289 1.0593 6 6 2.0951 -2.0437 0.0012 7 1 2.9748 -2.6873 0.0021 8 7 0.8381 -2.7962 0.0016 9 6 0.7662 -4.0259 -0.6341 10 7 1.7492 -4.5991 -1.2563 11 6 1.5030 -5.7747 -1.8066 12 6 0.2549 -6.2137 -1.6418 13 6 -0.3009 -7.5154 -2.1597 14 8 -0.1946 -7.5453 -3.5845 15 14 -2.0910 -7.6663 -1.6664 16 16 -0.6291 -5.0112 -0.7059 17 6 2.1467 -0.9314 -1.0594 18 1 -0.3633 0.2016 1.0078 19 1 -0.3634 0.7719 -0.6785 20 1 -0.3633 -0.9736 -0.3293 21 1 1.9627 1.8726 0.9731 22 1 3.1953 1.3519 -0.2005 23 1 1.8216 3.1015 -1.0705 24 1 1.4946 -1.1086 1.9145 25 1 3.1586 -0.6488 1.3499 26 1 0.0562 -2.4340 0.4468 27 1 2.2522 -6.3348 -2.3463 28 1 0.2637 -8.3458 -1.7357 29 1 -0.5338 -8.3563 -3.9872 30 1 -2.8719 -6.5398 -2.2378 31 1 -2.6420 -8.9600 -2.1439 32 1 3.1594 -0.6509 -1.3491 33 1 1.4957 -1.1130 -1.9146 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17058580_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:28 Heat of formation + Delta-G solvation = 4.584768 kcal Electronic energy + Delta-G solvation = -17113.630079 eV Core-core repulsion = 14269.126554 eV Total energy + Delta-G solvation = -2844.503525 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 257.087 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.44483 -40.26148 -37.95790 -37.38958 -35.12745 -31.42193 -30.42688 -27.75091 -26.88612 -26.33452 -24.65305 -22.87372 -20.57336 -19.94036 -19.04296 -18.56122 -18.28761 -17.57615 -16.68148 -16.33374 -16.02096 -15.79082 -15.43652 -15.33646 -14.59112 -14.44551 -14.31043 -13.95061 -13.66487 -13.32189 -13.07794 -12.81398 -12.48430 -12.34292 -12.25520 -11.87796 -11.62764 -11.30013 -10.99195 -10.77769 -10.59548 -10.20361 -10.07231 -8.63358 -5.05446 0.02599 0.12912 0.75854 1.26328 1.55522 1.92969 2.11210 2.17771 3.07735 3.37354 3.38988 3.52283 3.71583 3.77730 3.96222 4.03963 4.14209 4.43178 4.43613 4.46235 4.52206 4.65858 4.72915 4.79874 4.85557 4.88412 4.99724 5.11237 5.15205 5.29185 5.40521 5.95969 6.11255 6.42990 6.66422 7.10552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.085 4.085 3 C 0.091 3.909 4 O -0.570 6.570 5 C -0.136 4.136 6 C 0.139 3.861 7 H 0.103 0.897 8 N -0.676 5.676 9 C 0.326 3.674 10 N -0.547 5.547 11 C 0.119 3.881 12 C -0.262 4.262 13 C -0.018 4.018 14 O -0.534 6.534 15 Si 0.650 3.350 16 S 0.094 5.906 17 C -0.138 4.138 18 H 0.058 0.942 19 H 0.074 0.926 20 H 0.057 0.943 21 H 0.046 0.954 22 H 0.048 0.952 23 H 0.379 0.621 24 H 0.078 0.922 25 H 0.100 0.900 26 H 0.415 0.585 27 H 0.175 0.825 28 H 0.084 0.916 29 H 0.381 0.619 30 H -0.239 1.239 31 H -0.241 1.241 32 H 0.090 0.910 33 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.037 0.434 4.242 4.265 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.085 4.085 3 C 0.013 3.987 4 O -0.375 6.375 5 C -0.174 4.174 6 C 0.031 3.969 7 H 0.121 0.879 8 N -0.317 5.317 9 C -0.045 4.045 10 N -0.272 5.272 11 C -0.032 4.032 12 C -0.384 4.384 13 C -0.130 4.130 14 O -0.342 6.342 15 Si 0.549 3.451 16 S 0.343 5.657 17 C -0.177 4.177 18 H 0.077 0.923 19 H 0.093 0.907 20 H 0.076 0.924 21 H 0.064 0.936 22 H 0.066 0.934 23 H 0.226 0.774 24 H 0.097 0.903 25 H 0.118 0.882 26 H 0.255 0.745 27 H 0.192 0.808 28 H 0.102 0.898 29 H 0.229 0.771 30 H -0.163 1.163 31 H -0.165 1.165 32 H 0.109 0.891 33 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -1.223 0.802 4.342 4.582 hybrid contribution 0.995 -0.253 -1.263 1.628 sum -0.228 0.549 3.079 3.136 Atomic orbital electron populations 1.21681 0.92680 1.02430 1.02320 1.21957 0.96516 0.92767 0.97265 1.22109 0.95261 0.90856 0.90498 1.86483 1.65918 1.27508 1.57627 1.23440 1.02571 0.94686 0.96720 1.21797 0.86778 0.91829 0.96471 0.87855 1.44023 1.14037 1.15428 1.58204 1.23708 0.93280 0.91881 0.95602 1.66481 1.30563 1.11827 1.18340 1.21295 0.95022 0.90378 0.96527 1.24303 0.97171 1.02796 1.14121 1.23700 1.10907 0.94758 0.83684 1.86619 1.84765 1.44637 1.18157 0.95270 0.75216 0.82537 0.92060 1.83908 1.14127 1.13443 1.54243 1.23563 1.01730 0.95040 0.97386 0.92317 0.90721 0.92446 0.93576 0.93378 0.77370 0.90323 0.88158 0.74468 0.80814 0.89845 0.77119 1.16322 1.16478 0.89112 0.90794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.05 8.64 37.16 0.32 0.37 16 2 C -0.08 0.05 1.20 -153.61 -0.18 -0.13 16 3 C 0.09 -0.08 6.52 37.16 0.24 0.16 16 4 O -0.57 -0.27 12.54 -35.23 -0.44 -0.71 16 5 C -0.14 0.26 6.97 -25.92 -0.18 0.08 16 6 C 0.14 0.00 4.34 -67.12 -0.29 -0.29 16 7 H 0.10 0.11 7.87 -51.93 -0.41 -0.29 16 8 N -0.68 -0.22 4.64 -54.99 -0.26 -0.48 16 9 C 0.33 0.80 8.09 -87.68 -0.71 0.10 16 10 N -0.55 -2.26 9.96 -15.21 -0.15 -2.41 16 11 C 0.12 0.39 11.22 -19.14 -0.21 0.18 16 12 C -0.26 -0.62 5.78 -36.02 -0.21 -0.83 16 13 C -0.02 -0.01 2.98 36.01 0.11 0.10 16 14 O -0.53 -0.84 12.85 -35.23 -0.45 -1.29 16 15 Si 0.65 -0.07 31.05 -169.99 -5.28 -5.35 16 16 S 0.09 0.13 20.57 -107.50 -2.21 -2.08 16 17 C -0.14 -0.08 6.99 -25.83 -0.18 -0.26 16 18 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 19 H 0.07 0.11 7.14 -51.93 -0.37 -0.26 16 20 H 0.06 -0.03 5.31 -51.93 -0.28 -0.31 16 21 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 22 H 0.05 -0.08 7.95 -51.93 -0.41 -0.49 16 23 H 0.38 -1.32 9.12 45.56 0.42 -0.91 16 24 H 0.08 -0.19 8.10 -51.93 -0.42 -0.61 16 25 H 0.10 -0.29 8.10 -51.93 -0.42 -0.71 16 26 H 0.41 -0.58 6.64 -40.82 -0.27 -0.85 16 27 H 0.17 0.33 8.06 -52.49 -0.42 -0.09 16 28 H 0.08 -0.12 7.96 -51.93 -0.41 -0.54 16 29 H 0.38 -1.02 8.74 45.56 0.40 -0.62 16 30 H -0.24 -0.74 7.11 56.52 0.40 -0.34 16 31 H -0.24 -0.26 7.11 56.52 0.40 0.14 16 32 H 0.09 0.01 7.96 -51.93 -0.41 -0.40 16 33 H 0.07 0.20 8.10 -51.92 -0.42 -0.22 16 LS Contribution 285.87 15.07 4.31 4.31 Total: 0.00 -6.81 285.87 -9.26 -16.07 By element: Atomic # 1 Polarization: -4.04 SS G_CDS: -3.48 Total: -7.52 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -1.30 Total: -0.53 kcal Atomic # 7 Polarization: -2.49 SS G_CDS: -0.41 Total: -2.89 kcal Atomic # 8 Polarization: -1.11 SS G_CDS: -0.89 Total: -2.00 kcal Atomic # 14 Polarization: -0.07 SS G_CDS: -5.28 Total: -5.35 kcal Atomic # 16 Polarization: 0.13 SS G_CDS: -2.21 Total: -2.08 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -6.81 -9.26 -16.07 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.655 kcal (2) G-P(sol) polarization free energy of solvation -6.810 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.260 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.070 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds