Wall clock time and date at job start Mon Mar 8 2021 06:46:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.33325 * 125.95018 * 2 1 4 4 C 1.50701 * 122.71181 * 0.02562 * 3 2 1 5 5 O 1.42894 * 109.47261 * 45.15066 * 4 3 2 6 6 Si 1.86301 * 109.47316 * 165.15194 * 4 3 2 7 7 N 1.32126 * 114.57994 * 180.28700 * 3 2 1 8 8 C 1.29684 * 116.86159 * 359.48699 * 7 3 2 9 9 N 1.38618 * 124.94678 * 180.22312 * 8 7 3 10 10 C 1.46493 * 120.00036 * 180.28296 * 9 8 7 11 11 H 1.09005 * 112.84839 * 328.54527 * 10 9 8 12 12 C 1.53783 * 113.61869 * 99.85061 * 10 9 8 13 13 C 1.53786 * 87.07814 * 89.11421 * 12 10 9 14 14 C 1.52998 * 113.61557 * 270.88717 * 13 12 10 15 15 C 1.53004 * 113.68771 * 139.99524 * 13 12 10 16 16 O 1.42893 * 109.47186 * 82.46455 * 15 13 12 17 17 C 1.53784 * 87.08105 * 25.43835 * 13 12 10 18 18 S 1.70959 * 110.10540 * 0.49180 * 8 7 3 19 19 H 1.09005 * 109.47135 * 83.96188 * 1 2 3 20 20 H 1.08998 * 109.47101 * 203.95808 * 1 2 3 21 21 H 1.08992 * 109.47297 * 323.96283 * 1 2 3 22 22 H 1.09000 * 109.46779 * 285.15172 * 4 3 2 23 23 H 0.96701 * 113.99809 * 59.99880 * 5 4 3 24 24 H 1.48494 * 109.99869 * 179.97438 * 6 4 3 25 25 H 1.48500 * 110.00141 * 301.31777 * 6 4 3 26 26 H 0.97005 * 119.99683 * 0.27746 * 9 8 7 27 27 H 1.08999 * 113.61695 * 203.66558 * 12 10 9 28 28 H 1.09000 * 113.61061 * 334.57250 * 12 10 9 29 29 H 1.09002 * 109.46874 * 150.42945 * 14 13 12 30 30 H 1.09000 * 109.46898 * 270.42433 * 14 13 12 31 31 H 1.08996 * 109.47259 * 30.42834 * 14 13 12 32 32 H 1.08999 * 109.46915 * 202.46583 * 15 13 12 33 33 H 1.09003 * 109.47340 * 322.46507 * 15 13 12 34 34 H 0.96697 * 114.00273 * 179.97438 * 16 15 13 35 35 H 1.09001 * 113.60870 * 220.02188 * 17 13 12 36 36 H 1.09000 * 113.61825 * 89.11042 * 17 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 0.0006 5 8 0.6834 2.5807 0.9561 6 14 3.0969 3.6792 0.4505 7 7 3.5850 0.8188 -0.0060 8 6 3.9314 -0.4309 -0.0007 9 7 5.2385 -0.8925 -0.0012 10 6 5.5066 -2.3327 -0.0011 11 1 4.7419 -2.9056 0.5234 12 6 5.8558 -2.8945 -1.3894 13 6 7.3232 -2.5672 -1.0660 14 6 7.7402 -1.1531 -1.4747 15 6 8.3100 -3.6373 -1.5374 16 8 8.6020 -3.4391 -2.9220 17 6 6.9418 -2.6922 0.4185 18 16 2.5414 -1.4260 -0.0006 19 1 -0.3634 0.1081 -1.0220 20 1 -0.3633 -0.9391 0.4173 21 1 -0.3633 0.8309 0.6045 22 1 1.3586 2.7239 -0.9912 23 1 0.9525 2.3791 1.8628 24 1 2.5691 5.0671 0.4539 25 1 3.6490 3.3419 1.7872 26 1 5.9756 -0.2619 -0.0017 27 1 5.6585 -3.9617 -1.4909 28 1 5.4489 -2.3076 -2.2129 29 1 8.5245 -0.7980 -0.8061 30 1 8.1140 -1.1662 -2.4986 31 1 6.8793 -0.4876 -1.4107 32 1 9.2301 -3.5635 -0.9578 33 1 7.8700 -4.6246 -1.3965 34 1 9.2231 -4.0829 -3.2891 35 1 7.4115 -1.9419 1.0546 36 1 7.0413 -3.7041 0.8113 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17058580_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:30 Heat of formation + Delta-G solvation = -2.103963 kcal Electronic energy + Delta-G solvation = -19080.838785 eV Core-core repulsion = 16080.507596 eV Total energy + Delta-G solvation = -3000.331189 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.103 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.56401 -40.78710 -37.92313 -37.39357 -35.27210 -32.60075 -30.57565 -29.08415 -27.59848 -27.00352 -25.61217 -24.36907 -23.00136 -20.67057 -19.78969 -18.82562 -18.34951 -17.90378 -17.58268 -16.72298 -16.58920 -16.11910 -15.85113 -15.63683 -15.28135 -14.64317 -14.46983 -14.13402 -14.08697 -13.75488 -13.61767 -13.45917 -13.25804 -13.11104 -12.69844 -12.54609 -12.27460 -11.94486 -11.78473 -11.60035 -11.40836 -10.98097 -10.81589 -10.54031 -10.39818 -9.99926 -8.59442 -4.61901 0.06088 0.22024 0.82696 1.48357 1.83605 1.89913 1.97724 2.15352 2.98588 3.22353 3.37111 3.40784 3.51231 3.59900 3.86087 4.02798 4.19121 4.24252 4.37764 4.40650 4.41917 4.51734 4.53471 4.61606 4.71839 4.80326 4.81458 4.92063 4.95898 5.00078 5.06678 5.17682 5.34024 5.35282 5.68542 6.26982 6.41532 6.61229 6.98236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C -0.234 4.234 3 C 0.064 3.936 4 C -0.042 4.042 5 O -0.526 6.526 6 Si 0.724 3.276 7 N -0.540 5.540 8 C 0.320 3.680 9 N -0.676 5.676 10 C 0.124 3.876 11 H 0.095 0.905 12 C -0.143 4.143 13 C -0.082 4.082 14 C -0.136 4.136 15 C 0.090 3.910 16 O -0.569 6.569 17 C -0.132 4.132 18 S 0.102 5.898 19 H 0.070 0.930 20 H 0.061 0.939 21 H 0.097 0.903 22 H 0.123 0.877 23 H 0.376 0.624 24 H -0.264 1.264 25 H -0.268 1.268 26 H 0.415 0.585 27 H 0.094 0.906 28 H 0.078 0.922 29 H 0.058 0.942 30 H 0.074 0.926 31 H 0.062 0.938 32 H 0.047 0.953 33 H 0.048 0.952 34 H 0.380 0.620 35 H 0.082 0.918 36 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.017 -4.490 -0.012 5.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.357 4.357 3 C -0.066 4.066 4 C -0.155 4.155 5 O -0.331 6.331 6 Si 0.625 3.375 7 N -0.266 5.266 8 C -0.051 4.051 9 N -0.319 5.319 10 C 0.018 3.982 11 H 0.113 0.887 12 C -0.182 4.182 13 C -0.082 4.082 14 C -0.193 4.193 15 C 0.013 3.987 16 O -0.375 6.375 17 C -0.170 4.170 18 S 0.352 5.648 19 H 0.088 0.912 20 H 0.080 0.920 21 H 0.115 0.885 22 H 0.140 0.860 23 H 0.224 0.776 24 H -0.190 1.190 25 H -0.192 1.192 26 H 0.256 0.744 27 H 0.113 0.887 28 H 0.097 0.903 29 H 0.077 0.923 30 H 0.093 0.907 31 H 0.081 0.919 32 H 0.065 0.935 33 H 0.066 0.934 34 H 0.227 0.773 35 H 0.101 0.899 36 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.816 -4.094 0.119 4.970 hybrid contribution -0.061 -0.143 0.817 0.831 sum 2.754 -4.237 0.936 5.139 Atomic orbital electron populations 1.20319 0.86641 1.03446 1.03185 1.25158 1.01273 0.92845 1.16397 1.20019 0.86691 0.97187 1.02703 1.24503 0.98527 0.95719 0.96708 1.86551 1.35020 1.91397 1.20179 0.93549 0.81671 0.75429 0.86866 1.65691 1.17093 1.16488 1.27363 1.23244 0.91750 0.91445 0.98629 1.43924 1.01791 1.06275 1.79893 1.21929 0.98202 0.79914 0.98149 0.88700 1.23624 0.95322 1.01903 0.97328 1.21887 0.94615 0.96507 0.95159 1.21709 1.01263 0.93355 1.03003 1.22098 0.97358 0.96836 0.82444 1.86479 1.68349 1.58113 1.24537 1.23402 0.94175 1.03386 0.96045 1.83994 0.96438 1.10572 1.73833 0.91166 0.91991 0.88490 0.85964 0.77596 1.19036 1.19243 0.74374 0.88739 0.90284 0.92285 0.90674 0.91909 0.93490 0.93389 0.77289 0.89949 0.87932 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.06 9.97 36.00 0.36 0.30 16 2 C -0.23 -0.51 6.49 -36.03 -0.23 -0.75 16 3 C 0.06 0.17 6.00 -84.18 -0.50 -0.33 16 4 C -0.04 -0.07 2.73 36.01 0.10 0.03 16 5 O -0.53 -0.83 10.28 -35.23 -0.36 -1.19 16 6 Si 0.72 1.27 31.87 -169.99 -5.42 -4.15 16 7 N -0.54 -1.68 8.60 -11.36 -0.10 -1.78 16 8 C 0.32 0.62 8.24 -87.68 -0.72 -0.11 16 9 N -0.68 0.13 4.65 -54.99 -0.26 -0.13 16 10 C 0.12 -0.22 4.18 -67.12 -0.28 -0.50 16 11 H 0.10 -0.19 7.33 -51.93 -0.38 -0.57 16 12 C -0.14 0.20 6.99 -25.92 -0.18 0.02 16 13 C -0.08 0.14 1.19 -153.69 -0.18 -0.05 16 14 C -0.14 0.11 8.64 37.16 0.32 0.43 16 15 C 0.09 -0.17 6.52 37.16 0.24 0.07 16 16 O -0.57 0.25 12.54 -35.23 -0.44 -0.19 16 17 C -0.13 0.39 6.98 -25.92 -0.18 0.21 16 18 S 0.10 0.12 21.82 -107.50 -2.35 -2.22 16 19 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 20 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 21 H 0.10 0.08 5.73 -51.93 -0.30 -0.21 16 22 H 0.12 0.09 7.96 -51.93 -0.41 -0.33 16 23 H 0.38 -0.27 8.70 45.56 0.40 0.12 16 24 H -0.26 -1.06 7.11 56.52 0.40 -0.66 16 25 H -0.27 -1.24 7.11 56.52 0.40 -0.84 16 26 H 0.41 -0.27 6.59 -40.82 -0.27 -0.54 16 27 H 0.09 -0.21 7.97 -51.93 -0.41 -0.62 16 28 H 0.08 0.03 8.10 -51.93 -0.42 -0.39 16 29 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 0.07 7.14 -51.93 -0.37 -0.30 16 31 H 0.06 -0.05 5.26 -51.93 -0.27 -0.32 16 32 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.05 -0.14 7.95 -51.93 -0.41 -0.55 16 34 H 0.38 -1.63 9.12 45.56 0.42 -1.22 16 35 H 0.08 -0.24 8.10 -51.93 -0.42 -0.66 16 36 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 LS Contribution 302.51 15.07 4.56 4.56 Total: 0.00 -5.76 302.51 -9.80 -15.56 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -4.17 Total: -9.79 kcal Atomic # 6 Polarization: 0.60 SS G_CDS: -1.27 Total: -0.66 kcal Atomic # 7 Polarization: -1.56 SS G_CDS: -0.35 Total: -1.91 kcal Atomic # 8 Polarization: -0.58 SS G_CDS: -0.80 Total: -1.38 kcal Atomic # 14 Polarization: 1.27 SS G_CDS: -5.42 Total: -4.15 kcal Atomic # 16 Polarization: 0.12 SS G_CDS: -2.35 Total: -2.22 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -5.76 -9.80 -15.56 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.459 kcal (2) G-P(sol) polarization free energy of solvation -5.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.695 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds