Wall clock time and date at job start Mon Mar 8 2021 06:46:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.33325 * 125.95018 * 2 1 4 4 C 1.50701 * 122.71181 * 0.02562 * 3 2 1 5 5 O 1.42894 * 109.47261 * 45.15066 * 4 3 2 6 6 Si 1.86301 * 109.47316 * 165.15194 * 4 3 2 7 7 N 1.32126 * 114.57994 * 180.28700 * 3 2 1 8 8 C 1.29684 * 116.86159 * 359.48699 * 7 3 2 9 9 N 1.38618 * 124.94678 * 180.22312 * 8 7 3 10 10 C 1.46493 * 120.00036 * 180.28296 * 9 8 7 11 11 H 1.09005 * 112.84839 * 328.54527 * 10 9 8 12 12 C 1.53783 * 113.61869 * 99.85061 * 10 9 8 13 13 C 1.53786 * 87.07814 * 89.11421 * 12 10 9 14 14 C 1.52998 * 113.61557 * 270.88717 * 13 12 10 15 15 C 1.53004 * 113.68771 * 139.99524 * 13 12 10 16 16 O 1.42893 * 109.47186 * 82.46455 * 15 13 12 17 17 C 1.53784 * 87.08105 * 25.43835 * 13 12 10 18 18 S 1.70959 * 110.10540 * 0.49180 * 8 7 3 19 19 H 1.09005 * 109.47135 * 83.96188 * 1 2 3 20 20 H 1.08998 * 109.47101 * 203.95808 * 1 2 3 21 21 H 1.08992 * 109.47297 * 323.96283 * 1 2 3 22 22 H 1.09000 * 109.46779 * 285.15172 * 4 3 2 23 23 H 0.96701 * 113.99809 * 59.99880 * 5 4 3 24 24 H 1.48494 * 109.99869 * 179.97438 * 6 4 3 25 25 H 1.48500 * 110.00141 * 301.31777 * 6 4 3 26 26 H 0.97005 * 119.99683 * 0.27746 * 9 8 7 27 27 H 1.08999 * 113.61695 * 203.66558 * 12 10 9 28 28 H 1.09000 * 113.61061 * 334.57250 * 12 10 9 29 29 H 1.09002 * 109.46874 * 150.42945 * 14 13 12 30 30 H 1.09000 * 109.46898 * 270.42433 * 14 13 12 31 31 H 1.08996 * 109.47259 * 30.42834 * 14 13 12 32 32 H 1.08999 * 109.46915 * 202.46583 * 15 13 12 33 33 H 1.09003 * 109.47340 * 322.46507 * 15 13 12 34 34 H 0.96697 * 114.00273 * 179.97438 * 16 15 13 35 35 H 1.09001 * 113.60870 * 220.02188 * 17 13 12 36 36 H 1.09000 * 113.61825 * 89.11042 * 17 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 0.0006 5 8 0.6834 2.5807 0.9561 6 14 3.0969 3.6792 0.4505 7 7 3.5850 0.8188 -0.0060 8 6 3.9314 -0.4309 -0.0007 9 7 5.2385 -0.8925 -0.0012 10 6 5.5066 -2.3327 -0.0011 11 1 4.7419 -2.9056 0.5234 12 6 5.8558 -2.8945 -1.3894 13 6 7.3232 -2.5672 -1.0660 14 6 7.7402 -1.1531 -1.4747 15 6 8.3100 -3.6373 -1.5374 16 8 8.6020 -3.4391 -2.9220 17 6 6.9418 -2.6922 0.4185 18 16 2.5414 -1.4260 -0.0006 19 1 -0.3634 0.1081 -1.0220 20 1 -0.3633 -0.9391 0.4173 21 1 -0.3633 0.8309 0.6045 22 1 1.3586 2.7239 -0.9912 23 1 0.9525 2.3791 1.8628 24 1 2.5691 5.0671 0.4539 25 1 3.6490 3.3419 1.7872 26 1 5.9756 -0.2619 -0.0017 27 1 5.6585 -3.9617 -1.4909 28 1 5.4489 -2.3076 -2.2129 29 1 8.5245 -0.7980 -0.8061 30 1 8.1140 -1.1662 -2.4986 31 1 6.8793 -0.4876 -1.4107 32 1 9.2301 -3.5635 -0.9578 33 1 7.8700 -4.6246 -1.3965 34 1 9.2231 -4.0829 -3.2891 35 1 7.4115 -1.9419 1.0546 36 1 7.0413 -3.7041 0.8113 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17058580_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:29 Heat of formation + Delta-G solvation = -0.176605 kcal Electronic energy + Delta-G solvation = -19080.755209 eV Core-core repulsion = 16080.507596 eV Total energy + Delta-G solvation = -3000.247613 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.103 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.49064 -40.84316 -37.97653 -37.33136 -35.27365 -32.65217 -30.50260 -29.16230 -27.48607 -26.83415 -25.69681 -24.43484 -22.91717 -20.74256 -19.71140 -18.84364 -18.22743 -17.99487 -17.60583 -16.76760 -16.57127 -16.05220 -15.80416 -15.68558 -15.33256 -14.56214 -14.35834 -14.32108 -14.08178 -13.84439 -13.58831 -13.43277 -13.19418 -13.05910 -12.79225 -12.48140 -12.43378 -12.00224 -11.79557 -11.52963 -11.26539 -10.91080 -10.73843 -10.65534 -10.51171 -10.09742 -8.65308 -4.79441 -0.05039 0.13390 0.71857 1.33033 1.67938 1.80700 1.86593 1.94742 3.18903 3.30966 3.38441 3.46305 3.58542 3.70611 4.03552 4.12357 4.17693 4.34055 4.36674 4.51627 4.57733 4.61056 4.69301 4.74269 4.77515 4.86384 4.88147 4.91792 5.01913 5.08311 5.13984 5.20600 5.30830 5.38830 5.72572 6.25605 6.40254 6.88917 6.92499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 C -0.247 4.247 3 C 0.053 3.947 4 C -0.040 4.040 5 O -0.532 6.532 6 Si 0.782 3.218 7 N -0.561 5.561 8 C 0.310 3.690 9 N -0.671 5.671 10 C 0.121 3.879 11 H 0.101 0.899 12 C -0.141 4.141 13 C -0.086 4.086 14 C -0.133 4.133 15 C 0.088 3.912 16 O -0.593 6.593 17 C -0.119 4.119 18 S 0.122 5.878 19 H 0.072 0.928 20 H 0.069 0.931 21 H 0.095 0.905 22 H 0.133 0.867 23 H 0.385 0.615 24 H -0.295 1.295 25 H -0.307 1.307 26 H 0.416 0.584 27 H 0.105 0.895 28 H 0.057 0.943 29 H 0.065 0.935 30 H 0.055 0.945 31 H 0.058 0.942 32 H 0.054 0.946 33 H 0.061 0.939 34 H 0.394 0.606 35 H 0.085 0.915 36 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.134 -5.637 0.238 6.454 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.371 4.371 3 C -0.077 4.077 4 C -0.153 4.153 5 O -0.339 6.339 6 Si 0.689 3.311 7 N -0.289 5.289 8 C -0.061 4.061 9 N -0.314 5.314 10 C 0.015 3.985 11 H 0.119 0.881 12 C -0.181 4.181 13 C -0.086 4.086 14 C -0.191 4.191 15 C 0.010 3.990 16 O -0.401 6.401 17 C -0.157 4.157 18 S 0.371 5.629 19 H 0.091 0.909 20 H 0.088 0.912 21 H 0.113 0.887 22 H 0.150 0.850 23 H 0.234 0.766 24 H -0.223 1.223 25 H -0.234 1.234 26 H 0.257 0.743 27 H 0.124 0.876 28 H 0.076 0.924 29 H 0.084 0.916 30 H 0.074 0.926 31 H 0.077 0.923 32 H 0.072 0.928 33 H 0.079 0.921 34 H 0.243 0.757 35 H 0.103 0.897 36 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 2.953 -5.268 0.355 6.049 hybrid contribution -0.057 0.193 0.755 0.782 sum 2.896 -5.075 1.110 5.947 Atomic orbital electron populations 1.20324 0.85817 1.03792 1.03370 1.25400 1.02044 0.93216 1.16403 1.20154 0.86791 0.97670 1.03120 1.24511 0.98308 0.95220 0.97248 1.86528 1.35132 1.91370 1.20885 0.92810 0.80554 0.73170 0.84613 1.65693 1.17459 1.17269 1.28472 1.23497 0.92689 0.91514 0.98372 1.44077 1.01147 1.07064 1.79074 1.22067 0.99291 0.78991 0.98154 0.88126 1.23624 0.95565 1.02206 0.96668 1.21917 0.94500 0.95988 0.96217 1.21660 1.01221 0.94219 1.01969 1.22192 0.97668 0.97230 0.81900 1.86443 1.69040 1.59180 1.25448 1.23386 0.92708 1.04522 0.95106 1.83835 0.95652 1.09783 1.73592 0.90902 0.91222 0.88653 0.84977 0.76570 1.22285 1.23447 0.74251 0.87643 0.92377 0.91641 0.92641 0.92305 0.92796 0.92114 0.75658 0.89672 0.86003 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.10 9.97 71.24 0.71 0.62 16 2 C -0.25 -1.09 6.49 24.57 0.16 -0.94 16 3 C 0.05 0.31 6.00 41.40 0.25 0.55 16 4 C -0.04 -0.14 2.73 71.24 0.19 0.05 16 5 O -0.53 -1.80 10.28 -148.98 -1.53 -3.33 16 6 Si 0.78 3.60 31.87 68.60 2.19 5.79 16 7 N -0.56 -3.84 8.60 -189.86 -1.63 -5.48 16 8 C 0.31 1.29 8.24 179.32 1.48 2.77 16 9 N -0.67 0.13 4.65 -327.90 -1.53 -1.39 16 10 C 0.12 -0.49 4.18 45.52 0.19 -0.30 16 11 H 0.10 -0.50 7.33 -2.38 -0.02 -0.52 16 12 C -0.14 0.42 6.99 31.12 0.22 0.63 16 13 C -0.09 0.32 1.19 -51.65 -0.06 0.26 16 14 C -0.13 0.15 8.64 71.98 0.62 0.77 16 15 C 0.09 -0.39 6.52 71.98 0.47 0.08 16 16 O -0.59 0.49 12.54 -148.98 -1.87 -1.38 16 17 C -0.12 0.85 6.98 31.12 0.22 1.07 16 18 S 0.12 0.28 21.82 -56.49 -1.23 -0.95 16 19 H 0.07 0.05 8.14 -2.38 -0.02 0.03 16 20 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 21 H 0.10 0.15 5.73 -2.39 -0.01 0.14 16 22 H 0.13 0.19 7.96 -2.39 -0.02 0.17 16 23 H 0.39 -0.39 8.70 -74.06 -0.64 -1.03 16 24 H -0.29 -2.78 7.11 99.48 0.71 -2.08 16 25 H -0.31 -3.43 7.11 99.48 0.71 -2.72 16 26 H 0.42 -0.37 6.59 -92.70 -0.61 -0.98 16 27 H 0.11 -0.55 7.97 -2.39 -0.02 -0.57 16 28 H 0.06 0.09 8.10 -2.39 -0.02 0.07 16 29 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.05 0.17 7.14 -2.39 -0.02 0.15 16 31 H 0.06 -0.03 5.26 -2.39 -0.01 -0.04 16 32 H 0.05 -0.32 8.14 -2.39 -0.02 -0.34 16 33 H 0.06 -0.43 7.95 -2.39 -0.02 -0.45 16 34 H 0.39 -3.40 9.12 -74.06 -0.68 -4.07 16 35 H 0.08 -0.60 8.10 -2.39 -0.02 -0.62 16 36 H 0.12 -1.29 8.10 -2.39 -0.02 -1.31 16 Total: 0.00 -13.68 302.51 -1.93 -15.61 By element: Atomic # 1 Polarization: -13.66 SS G_CDS: -0.77 Total: -14.43 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: 4.44 Total: 5.56 kcal Atomic # 7 Polarization: -3.71 SS G_CDS: -3.16 Total: -6.87 kcal Atomic # 8 Polarization: -1.31 SS G_CDS: -3.40 Total: -4.71 kcal Atomic # 14 Polarization: 3.60 SS G_CDS: 2.19 Total: 5.79 kcal Atomic # 16 Polarization: 0.28 SS G_CDS: -1.23 Total: -0.95 kcal Total: -13.68 -1.93 -15.61 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.434 kcal (2) G-P(sol) polarization free energy of solvation -13.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.611 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds