Wall clock time and date at job start Mon Mar 8 2021 06:46:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.53005 * 112.90614 * 2 1 4 4 O 1.42908 * 109.46892 * 48.75318 * 3 2 1 5 5 C 1.53775 * 113.61460 * 131.25046 * 2 1 3 6 6 C 1.53778 * 87.08125 * 139.98087 * 5 2 1 7 7 H 1.09008 * 113.68732 * 89.12525 * 6 5 2 8 8 N 1.46499 * 113.61757 * 220.01829 * 6 5 2 9 9 C 1.39146 * 120.00095 * 252.49822 * 8 6 5 10 10 N 1.32336 * 119.71918 * 0.02562 * 9 8 6 11 11 C 1.32008 * 121.64552 * 179.75597 * 10 9 8 12 12 C 1.37982 * 120.89940 * 0.48677 * 11 10 9 13 13 C 1.50703 * 120.32510 * 179.77841 * 12 11 10 14 14 O 1.42896 * 109.47055 * 119.72356 * 13 12 11 15 15 Si 1.86304 * 109.46911 * 359.72249 * 13 12 11 16 16 C 1.38900 * 119.34938 * 359.50321 * 12 11 10 17 17 C 1.38449 * 118.48304 * 0.25016 * 16 12 11 18 18 F 1.35107 * 120.46859 * 180.02562 * 17 16 12 19 19 C 1.53776 * 113.61386 * 228.75460 * 2 1 3 20 20 H 1.08995 * 109.46696 * 191.24660 * 1 2 3 21 21 H 1.08997 * 109.47128 * 311.25366 * 1 2 3 22 22 H 1.09000 * 109.46782 * 71.24916 * 1 2 3 23 23 H 1.09001 * 109.47069 * 168.74263 * 3 2 1 24 24 H 1.08996 * 109.47563 * 288.74832 * 3 2 1 25 25 H 0.96702 * 113.99786 * 180.02562 * 4 3 2 26 26 H 1.09001 * 113.61382 * 25.43961 * 5 2 1 27 27 H 1.09000 * 113.62118 * 254.52901 * 5 2 1 28 28 H 0.96995 * 119.99498 * 72.50192 * 8 6 5 29 29 H 1.07999 * 119.54832 * 180.26772 * 11 10 9 30 30 H 1.09002 * 109.47152 * 239.72164 * 13 12 11 31 31 H 0.96708 * 114.00101 * 299.99358 * 14 13 12 32 32 H 1.48501 * 109.99652 * 179.97438 * 15 13 12 33 33 H 1.48494 * 110.00064 * 301.31786 * 15 13 12 34 34 H 1.07995 * 120.75897 * 180.23211 * 16 12 11 35 35 H 1.08998 * 113.61583 * 105.47085 * 19 2 1 36 36 H 1.08996 * 113.61592 * 334.56203 * 19 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1256 1.4094 0.0000 4 8 1.4927 2.1939 1.0131 5 6 2.1461 -0.9290 1.0593 6 6 3.1924 -1.3136 0.0000 7 1 4.0718 -0.6694 -0.0010 8 7 3.5311 -2.7388 0.0000 9 6 4.7651 -3.1607 0.4853 10 7 5.6283 -2.2697 0.9460 11 6 6.8073 -2.6280 1.4195 12 6 7.1887 -3.9539 1.4419 13 6 8.5398 -4.3480 1.9808 14 8 8.3704 -5.2281 3.0937 15 14 9.4585 -2.8229 2.5293 16 6 6.3128 -4.9223 0.9683 17 6 5.0812 -4.5177 0.4823 18 9 4.1982 -5.4260 0.0124 19 6 2.1460 -0.9289 -1.0594 20 1 -0.3632 -1.0079 0.2004 21 1 -0.3633 0.6776 0.7726 22 1 -0.3633 0.3304 -0.9731 23 1 3.1954 1.3518 0.2006 24 1 1.9628 1.8727 -0.9731 25 1 1.8213 3.1016 1.0702 26 1 1.4946 -1.7536 1.3489 27 1 2.5651 -0.3989 1.9146 28 1 2.8952 -3.3884 -0.3384 29 1 7.4840 -1.8727 1.7910 30 1 9.1086 -4.8540 1.2007 31 1 7.8719 -4.8431 3.8275 32 1 10.7924 -3.1981 3.0633 33 1 9.6131 -1.8852 1.3882 34 1 6.5864 -5.9670 0.9787 35 1 2.5650 -0.3986 -1.9146 36 1 1.4946 -1.7534 -1.3490 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17058580_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:32 Heat of formation + Delta-G solvation = -57.258386 kcal Electronic energy + Delta-G solvation = -20641.552242 eV Core-core repulsion = 17235.760775 eV Total energy + Delta-G solvation = -3405.791468 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -49.85400 -41.58179 -40.81173 -38.09866 -37.28867 -35.60360 -33.20607 -31.75919 -29.93650 -27.45397 -26.85279 -26.39986 -25.17765 -23.10586 -22.35945 -19.80876 -19.04572 -18.65179 -18.30617 -18.21743 -17.54851 -16.94441 -16.56488 -16.33132 -16.08062 -15.88329 -15.51841 -15.36693 -14.93750 -14.37697 -14.27374 -14.26033 -13.95411 -13.66089 -13.46124 -13.29626 -12.97664 -12.87805 -12.59687 -12.08383 -11.79663 -11.48548 -11.45730 -11.11326 -10.83112 -10.65566 -10.65064 -10.45838 -8.74161 -5.09840 -0.06027 0.12918 1.21789 1.56442 1.92031 1.98803 2.55617 3.01935 3.05478 3.25933 3.40053 3.40807 3.58043 3.58997 3.77079 3.83964 3.96364 3.99553 4.16530 4.38278 4.40987 4.44920 4.46938 4.58504 4.67350 4.70272 4.72459 4.79278 4.91602 4.97633 5.08412 5.14120 5.21968 5.42825 5.46669 5.97073 6.19131 6.51722 6.65764 6.95946 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.081 4.081 3 C 0.098 3.902 4 O -0.568 6.568 5 C -0.140 4.140 6 C 0.134 3.866 7 H 0.119 0.881 8 N -0.706 5.706 9 C 0.391 3.609 10 N -0.513 5.513 11 C 0.148 3.852 12 C -0.211 4.211 13 C -0.055 4.055 14 O -0.541 6.541 15 Si 0.686 3.314 16 C -0.037 4.037 17 C -0.021 4.021 18 F -0.134 7.134 19 C -0.138 4.138 20 H 0.054 0.946 21 H 0.068 0.932 22 H 0.054 0.946 23 H 0.050 0.950 24 H 0.049 0.951 25 H 0.381 0.619 26 H 0.085 0.915 27 H 0.076 0.924 28 H 0.412 0.588 29 H 0.163 0.837 30 H 0.115 0.885 31 H 0.380 0.620 32 H -0.251 1.251 33 H -0.254 1.254 34 H 0.149 0.851 35 H 0.077 0.923 36 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.306 2.907 0.368 2.946 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.082 4.082 3 C 0.020 3.980 4 O -0.374 6.374 5 C -0.178 4.178 6 C 0.029 3.971 7 H 0.137 0.863 8 N -0.337 5.337 9 C 0.153 3.847 10 N -0.229 5.229 11 C -0.010 4.010 12 C -0.216 4.216 13 C -0.166 4.166 14 O -0.346 6.346 15 Si 0.587 3.413 16 C -0.063 4.063 17 C -0.048 4.048 18 F -0.113 7.113 19 C -0.177 4.177 20 H 0.073 0.927 21 H 0.087 0.913 22 H 0.074 0.926 23 H 0.068 0.932 24 H 0.067 0.933 25 H 0.228 0.772 26 H 0.103 0.897 27 H 0.095 0.905 28 H 0.250 0.750 29 H 0.179 0.821 30 H 0.133 0.867 31 H 0.227 0.773 32 H -0.176 1.176 33 H -0.179 1.179 34 H 0.167 0.833 35 H 0.095 0.905 36 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.119 3.488 -0.070 3.491 hybrid contribution -0.034 -1.276 -0.871 1.545 sum 0.085 2.212 -0.941 2.405 Atomic orbital electron populations 1.21595 0.92937 1.01952 1.02316 1.21557 0.96626 0.92839 0.97159 1.21908 0.95260 0.90149 0.90692 1.86465 1.65956 1.27531 1.57453 1.23587 0.97725 0.98891 0.97646 1.22599 0.97079 0.81211 0.96254 0.86314 1.44631 1.13915 1.08404 1.66783 1.18466 0.87839 0.87064 0.91344 1.67272 1.03871 1.35498 1.16304 1.22334 0.91542 0.93896 0.93185 1.20925 0.99230 0.93928 1.07547 1.24857 0.96446 1.04152 0.91170 1.86510 1.78333 1.42351 1.27393 0.94821 0.82015 0.77654 0.86784 1.21275 0.90489 1.01476 0.93104 1.18013 0.91154 0.85849 1.09771 1.91493 1.67208 1.65800 1.86767 1.23497 0.97655 0.99367 0.97142 0.92672 0.91263 0.92648 0.93172 0.93290 0.77174 0.89669 0.90536 0.75036 0.82084 0.86727 0.77280 1.17580 1.17887 0.83306 0.90462 0.88990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.00 9.08 37.16 0.34 0.34 16 2 C -0.08 0.05 1.19 -153.70 -0.18 -0.13 16 3 C 0.10 -0.09 6.39 37.16 0.24 0.15 16 4 O -0.57 -0.04 12.64 -35.23 -0.45 -0.49 16 5 C -0.14 0.01 6.99 -25.92 -0.18 -0.17 16 6 C 0.13 -0.06 3.92 -67.12 -0.26 -0.32 16 7 H 0.12 0.04 6.92 -51.92 -0.36 -0.32 16 8 N -0.71 -0.19 5.51 -53.06 -0.29 -0.48 16 9 C 0.39 0.68 7.49 -154.86 -1.16 -0.48 16 10 N -0.51 -0.86 9.13 -12.37 -0.11 -0.97 16 11 C 0.15 0.00 9.84 -17.57 -0.17 -0.18 16 12 C -0.21 0.04 5.40 -104.47 -0.56 -0.52 16 13 C -0.05 0.06 2.84 36.01 0.10 0.16 16 14 O -0.54 0.25 12.78 -35.23 -0.45 -0.20 16 15 Si 0.69 -1.34 29.82 -169.99 -5.07 -6.41 16 16 C -0.04 -0.03 9.75 -39.26 -0.38 -0.41 16 17 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 18 F -0.13 -0.32 16.65 2.25 0.04 -0.29 16 19 C -0.14 0.21 6.98 -25.92 -0.18 0.03 16 20 H 0.05 -0.02 7.94 -51.93 -0.41 -0.43 16 21 H 0.07 0.10 7.33 -51.93 -0.38 -0.28 16 22 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 23 H 0.05 -0.08 7.34 -51.93 -0.38 -0.46 16 24 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 25 H 0.38 -1.50 9.12 45.56 0.42 -1.09 16 26 H 0.08 0.01 7.96 -51.93 -0.41 -0.40 16 27 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 28 H 0.41 -0.31 8.20 -40.82 -0.33 -0.65 16 29 H 0.16 -0.38 4.88 -52.49 -0.26 -0.64 16 30 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 31 H 0.38 -1.60 8.70 45.56 0.40 -1.20 16 32 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 33 H -0.25 -0.05 7.11 56.52 0.40 0.36 16 34 H 0.15 0.00 8.06 -52.49 -0.42 -0.42 16 35 H 0.08 -0.14 8.10 -51.93 -0.42 -0.56 16 36 H 0.09 -0.18 8.08 -51.93 -0.42 -0.60 16 LS Contribution 302.92 15.07 4.56 4.56 Total: 0.00 -6.24 302.92 -8.33 -14.57 By element: Atomic # 1 Polarization: -4.55 SS G_CDS: -3.87 Total: -8.42 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: -2.70 Total: -1.88 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -0.41 Total: -1.45 kcal Atomic # 8 Polarization: 0.21 SS G_CDS: -0.90 Total: -0.69 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.07 Total: -6.41 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -6.24 -8.33 -14.57 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.686 kcal (2) G-P(sol) polarization free energy of solvation -6.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.572 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.258 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds