Wall clock time and date at job start Mon Mar 8 2021 06:46:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.53005 * 112.90614 * 2 1 4 4 O 1.42908 * 109.46892 * 48.75318 * 3 2 1 5 5 C 1.53775 * 113.61460 * 131.25046 * 2 1 3 6 6 C 1.53778 * 87.08125 * 139.98087 * 5 2 1 7 7 H 1.09008 * 113.68732 * 89.12525 * 6 5 2 8 8 N 1.46499 * 113.61757 * 220.01829 * 6 5 2 9 9 C 1.39146 * 120.00095 * 252.49822 * 8 6 5 10 10 N 1.32336 * 119.71918 * 0.02562 * 9 8 6 11 11 C 1.32008 * 121.64552 * 179.75597 * 10 9 8 12 12 C 1.37982 * 120.89940 * 0.48677 * 11 10 9 13 13 C 1.50703 * 120.32510 * 179.77841 * 12 11 10 14 14 O 1.42896 * 109.47055 * 119.72356 * 13 12 11 15 15 Si 1.86304 * 109.46911 * 359.72249 * 13 12 11 16 16 C 1.38900 * 119.34938 * 359.50321 * 12 11 10 17 17 C 1.38449 * 118.48304 * 0.25016 * 16 12 11 18 18 F 1.35107 * 120.46859 * 180.02562 * 17 16 12 19 19 C 1.53776 * 113.61386 * 228.75460 * 2 1 3 20 20 H 1.08995 * 109.46696 * 191.24660 * 1 2 3 21 21 H 1.08997 * 109.47128 * 311.25366 * 1 2 3 22 22 H 1.09000 * 109.46782 * 71.24916 * 1 2 3 23 23 H 1.09001 * 109.47069 * 168.74263 * 3 2 1 24 24 H 1.08996 * 109.47563 * 288.74832 * 3 2 1 25 25 H 0.96702 * 113.99786 * 180.02562 * 4 3 2 26 26 H 1.09001 * 113.61382 * 25.43961 * 5 2 1 27 27 H 1.09000 * 113.62118 * 254.52901 * 5 2 1 28 28 H 0.96995 * 119.99498 * 72.50192 * 8 6 5 29 29 H 1.07999 * 119.54832 * 180.26772 * 11 10 9 30 30 H 1.09002 * 109.47152 * 239.72164 * 13 12 11 31 31 H 0.96708 * 114.00101 * 299.99358 * 14 13 12 32 32 H 1.48501 * 109.99652 * 179.97438 * 15 13 12 33 33 H 1.48494 * 110.00064 * 301.31786 * 15 13 12 34 34 H 1.07995 * 120.75897 * 180.23211 * 16 12 11 35 35 H 1.08998 * 113.61583 * 105.47085 * 19 2 1 36 36 H 1.08996 * 113.61592 * 334.56203 * 19 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1256 1.4094 0.0000 4 8 1.4927 2.1939 1.0131 5 6 2.1461 -0.9290 1.0593 6 6 3.1924 -1.3136 0.0000 7 1 4.0718 -0.6694 -0.0010 8 7 3.5311 -2.7388 0.0000 9 6 4.7651 -3.1607 0.4853 10 7 5.6283 -2.2697 0.9460 11 6 6.8073 -2.6280 1.4195 12 6 7.1887 -3.9539 1.4419 13 6 8.5398 -4.3480 1.9808 14 8 8.3704 -5.2281 3.0937 15 14 9.4585 -2.8229 2.5293 16 6 6.3128 -4.9223 0.9683 17 6 5.0812 -4.5177 0.4823 18 9 4.1982 -5.4260 0.0124 19 6 2.1460 -0.9289 -1.0594 20 1 -0.3632 -1.0079 0.2004 21 1 -0.3633 0.6776 0.7726 22 1 -0.3633 0.3304 -0.9731 23 1 3.1954 1.3518 0.2006 24 1 1.9628 1.8727 -0.9731 25 1 1.8213 3.1016 1.0702 26 1 1.4946 -1.7536 1.3489 27 1 2.5651 -0.3989 1.9146 28 1 2.8952 -3.3884 -0.3384 29 1 7.4840 -1.8727 1.7910 30 1 9.1086 -4.8540 1.2007 31 1 7.8719 -4.8431 3.8275 32 1 10.7924 -3.1981 3.0633 33 1 9.6131 -1.8852 1.3882 34 1 6.5864 -5.9670 0.9787 35 1 2.5650 -0.3986 -1.9146 36 1 1.4946 -1.7534 -1.3490 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17058580_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:31 Heat of formation + Delta-G solvation = -56.880797 kcal Electronic energy + Delta-G solvation = -20641.535869 eV Core-core repulsion = 17235.760775 eV Total energy + Delta-G solvation = -3405.775094 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -49.97300 -41.59040 -40.78548 -38.05330 -37.23206 -35.59188 -33.24259 -31.76548 -29.92776 -27.39327 -26.80861 -26.36309 -25.20738 -23.11872 -22.35663 -19.79430 -19.02501 -18.64306 -18.32771 -18.17845 -17.54967 -17.02961 -16.54614 -16.29246 -16.04793 -15.85343 -15.47266 -15.39970 -14.94841 -14.38293 -14.27763 -14.26906 -13.98632 -13.62458 -13.47148 -13.22369 -12.95532 -12.85894 -12.54737 -12.12741 -11.74923 -11.44643 -11.42591 -11.09130 -10.76462 -10.70216 -10.67357 -10.41538 -8.76549 -4.96895 -0.10073 0.08661 1.31910 1.65865 1.98972 1.99749 2.51891 3.01012 3.14618 3.26823 3.44538 3.48745 3.64998 3.66245 3.81705 3.84520 3.97843 4.06296 4.22870 4.40942 4.44684 4.48579 4.56501 4.63620 4.71079 4.74785 4.80769 4.84439 4.90241 4.96734 5.09520 5.15668 5.24560 5.41845 5.47180 5.97544 6.18314 6.78210 6.91632 6.93854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 C -0.082 4.082 3 C 0.096 3.904 4 O -0.589 6.589 5 C -0.138 4.138 6 C 0.137 3.863 7 H 0.113 0.887 8 N -0.704 5.704 9 C 0.382 3.618 10 N -0.527 5.527 11 C 0.147 3.853 12 C -0.206 4.206 13 C -0.059 4.059 14 O -0.556 6.556 15 Si 0.774 3.226 16 C -0.040 4.040 17 C -0.039 4.039 18 F -0.141 7.141 19 C -0.128 4.128 20 H 0.057 0.943 21 H 0.052 0.948 22 H 0.059 0.941 23 H 0.055 0.945 24 H 0.058 0.942 25 H 0.396 0.604 26 H 0.081 0.919 27 H 0.063 0.937 28 H 0.416 0.584 29 H 0.184 0.816 30 H 0.111 0.889 31 H 0.396 0.604 32 H -0.296 1.296 33 H -0.278 1.278 34 H 0.154 0.846 35 H 0.085 0.915 36 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.133 3.276 0.241 3.288 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.083 4.083 3 C 0.018 3.982 4 O -0.397 6.397 5 C -0.178 4.178 6 C 0.032 3.968 7 H 0.131 0.869 8 N -0.335 5.335 9 C 0.143 3.857 10 N -0.244 5.244 11 C -0.010 4.010 12 C -0.212 4.212 13 C -0.170 4.170 14 O -0.364 6.364 15 Si 0.679 3.321 16 C -0.067 4.067 17 C -0.065 4.065 18 F -0.120 7.120 19 C -0.166 4.166 20 H 0.076 0.924 21 H 0.071 0.929 22 H 0.078 0.922 23 H 0.074 0.926 24 H 0.077 0.923 25 H 0.246 0.754 26 H 0.100 0.900 27 H 0.082 0.918 28 H 0.254 0.746 29 H 0.200 0.800 30 H 0.129 0.871 31 H 0.246 0.754 32 H -0.224 1.224 33 H -0.205 1.205 34 H 0.171 0.829 35 H 0.104 0.896 36 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.256 3.861 -0.192 3.874 hybrid contribution -0.042 -1.396 -0.796 1.607 sum 0.214 2.465 -0.987 2.664 Atomic orbital electron populations 1.21566 0.93403 1.01689 1.01955 1.21589 0.96241 0.93276 0.97210 1.21969 0.95422 0.89862 0.90945 1.86425 1.66564 1.28879 1.57881 1.23547 0.97895 0.98864 0.97451 1.22560 0.96913 0.80774 0.96590 0.86892 1.44685 1.13628 1.08763 1.66467 1.18615 0.88340 0.87147 0.91568 1.67324 1.04477 1.35704 1.16870 1.22706 0.91328 0.94502 0.92427 1.20992 0.99327 0.93719 1.07129 1.25003 0.96018 1.04751 0.91192 1.86476 1.78750 1.43105 1.28070 0.93787 0.78896 0.75273 0.84157 1.21426 0.90346 1.02027 0.92853 1.18151 0.91585 0.85935 1.10858 1.91466 1.67517 1.66032 1.87002 1.23446 0.97066 0.99257 0.96874 0.92397 0.92872 0.92194 0.92642 0.92343 0.75416 0.90014 0.91836 0.74623 0.79982 0.87126 0.75429 1.22416 1.20479 0.82865 0.89631 0.88331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.03 9.08 71.98 0.65 0.63 16 2 C -0.08 0.10 1.19 -51.66 -0.06 0.03 16 3 C 0.10 -0.19 6.39 71.98 0.46 0.27 16 4 O -0.59 -0.20 12.64 -148.98 -1.88 -2.08 16 5 C -0.14 -0.06 6.99 31.12 0.22 0.16 16 6 C 0.14 -0.10 3.92 45.52 0.18 0.08 16 7 H 0.11 0.08 6.92 -2.38 -0.02 0.06 16 8 N -0.70 -0.63 5.51 -321.78 -1.77 -2.40 16 9 C 0.38 1.48 7.49 133.08 1.00 2.48 16 10 N -0.53 -1.77 9.13 -193.04 -1.76 -3.53 16 11 C 0.15 -0.08 9.84 84.61 0.83 0.75 16 12 C -0.21 0.13 5.40 -19.77 -0.11 0.03 16 13 C -0.06 0.14 2.84 71.24 0.20 0.35 16 14 O -0.56 0.78 12.78 -148.98 -1.90 -1.12 16 15 Si 0.77 -3.40 29.82 68.60 2.05 -1.35 16 16 C -0.04 -0.08 9.75 22.48 0.22 0.14 16 17 C -0.04 -0.16 7.35 22.59 0.17 0.00 16 18 F -0.14 -0.80 16.65 44.97 0.75 -0.05 16 19 C -0.13 0.44 6.98 31.12 0.22 0.65 16 20 H 0.06 -0.03 7.94 -2.39 -0.02 -0.05 16 21 H 0.05 0.19 7.33 -2.39 -0.02 0.18 16 22 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 23 H 0.06 -0.18 7.34 -2.39 -0.02 -0.20 16 24 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 25 H 0.40 -3.10 9.12 -74.06 -0.68 -3.78 16 26 H 0.08 0.08 7.96 -2.39 -0.02 0.06 16 27 H 0.06 0.19 8.10 -2.39 -0.02 0.17 16 28 H 0.42 -0.45 8.20 -92.71 -0.76 -1.21 16 29 H 0.18 -1.06 4.88 -2.91 -0.01 -1.08 16 30 H 0.11 -0.18 7.96 -2.39 -0.02 -0.20 16 31 H 0.40 -3.64 8.70 -74.05 -0.64 -4.29 16 32 H -0.30 -0.99 7.11 99.48 0.71 -0.28 16 33 H -0.28 0.08 7.11 99.48 0.71 0.78 16 34 H 0.15 0.06 8.06 -2.91 -0.02 0.04 16 35 H 0.09 -0.40 8.10 -2.39 -0.02 -0.42 16 36 H 0.10 -0.45 8.08 -2.39 -0.02 -0.47 16 Total: 0.00 -14.50 302.92 -1.46 -15.96 By element: Atomic # 1 Polarization: -10.07 SS G_CDS: -0.91 Total: -10.98 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: 3.98 Total: 5.57 kcal Atomic # 7 Polarization: -2.40 SS G_CDS: -3.53 Total: -5.94 kcal Atomic # 8 Polarization: 0.58 SS G_CDS: -3.79 Total: -3.20 kcal Atomic # 9 Polarization: -0.80 SS G_CDS: 0.75 Total: -0.05 kcal Atomic # 14 Polarization: -3.40 SS G_CDS: 2.05 Total: -1.35 kcal Total: -14.50 -1.46 -15.96 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17058580_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.925 kcal (2) G-P(sol) polarization free energy of solvation -14.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.956 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds