Wall clock time and date at job start Mon Mar 8 2021 08:50:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.46497 * 119.99410 * 2 1 4 4 C 1.34774 * 120.00266 * 179.97438 * 2 1 3 5 5 O 1.21283 * 119.99890 * 4.29166 * 4 2 1 6 6 C 1.50693 * 119.99946 * 184.28478 * 4 2 1 7 7 H 1.09005 * 109.47582 * 323.66401 * 6 4 2 8 8 C 1.52995 * 109.47327 * 83.66580 * 6 4 2 9 9 C 1.52995 * 109.47845 * 179.97438 * 8 6 4 10 10 C 1.53000 * 109.46926 * 300.00455 * 9 8 6 11 11 H 1.09005 * 109.47028 * 299.99393 * 10 9 8 12 12 N 1.46502 * 109.47032 * 179.97438 * 10 9 8 13 13 C 1.38414 * 120.00036 * 154.99547 * 12 10 9 14 14 N 1.32496 * 119.21329 * 359.73635 * 13 12 10 15 15 C 1.32274 * 120.73366 * 179.71740 * 14 13 12 16 16 C 1.38603 * 119.20067 * 0.54109 * 15 14 13 17 17 C 1.50700 * 120.72262 * 179.71222 * 16 15 14 18 18 O 1.42899 * 109.47001 * 245.02254 * 17 16 15 19 19 Si 1.86305 * 109.47201 * 5.01787 * 17 16 15 20 20 C 1.38607 * 118.55735 * 359.72563 * 16 15 14 21 21 N 1.32276 * 119.19513 * 0.02562 * 20 16 15 22 22 C 1.52998 * 109.47376 * 59.99693 * 10 9 8 23 23 C 1.52995 * 109.47335 * 203.66581 * 6 4 2 24 24 H 1.09004 * 109.47435 * 269.99496 * 1 2 3 25 25 H 1.08993 * 109.47783 * 30.00329 * 1 2 3 26 26 H 1.09000 * 109.46992 * 150.00160 * 1 2 3 27 27 H 1.09003 * 109.46923 * 184.85333 * 3 2 1 28 28 H 1.09002 * 109.47172 * 304.84994 * 3 2 1 29 29 H 1.08999 * 109.47517 * 64.85076 * 3 2 1 30 30 H 1.09005 * 109.46931 * 59.99983 * 8 6 4 31 31 H 1.09006 * 109.47282 * 300.00388 * 8 6 4 32 32 H 1.09005 * 109.47225 * 59.99722 * 9 8 6 33 33 H 1.08999 * 109.47740 * 179.97438 * 9 8 6 34 34 H 0.97000 * 120.00504 * 334.99708 * 12 10 9 35 35 H 1.08001 * 120.40002 * 180.29321 * 15 14 13 36 36 H 1.08997 * 109.47272 * 125.01853 * 17 16 15 37 37 H 0.96696 * 114.00580 * 59.99164 * 18 17 16 38 38 H 1.48496 * 109.99796 * 58.67985 * 19 17 16 39 39 H 1.48491 * 109.99963 * 180.02562 * 19 17 16 40 40 H 1.08002 * 120.39822 * 180.02562 * 20 16 15 41 41 H 1.09001 * 109.47333 * 180.02562 * 22 10 9 42 42 H 1.08995 * 109.47295 * 59.99861 * 22 10 9 43 43 H 1.09005 * 109.47095 * 300.00123 * 23 6 4 44 44 H 1.08999 * 109.47637 * 59.99989 * 23 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.1389 -1.1671 0.0005 5 8 1.5351 -2.2161 -0.0776 6 6 3.6427 -1.1688 0.0980 7 1 4.0437 -0.3195 -0.4551 8 6 4.0587 -1.0633 1.5665 9 6 5.5855 -1.0657 1.6657 10 6 6.1330 -2.3654 1.0727 11 1 5.7317 -3.2146 1.6259 12 7 7.5950 -2.3674 1.1671 13 6 8.2850 -3.5670 1.1956 14 7 7.6073 -4.7042 1.1420 15 6 8.2365 -5.8676 1.1616 16 6 9.6195 -5.8870 1.2507 17 6 10.3708 -7.1930 1.2822 18 8 11.0213 -7.3380 2.5462 19 14 9.1776 -8.6019 1.0327 20 6 10.2966 -4.6790 1.3105 21 7 9.6070 -3.5507 1.2815 22 6 5.7171 -2.4709 -0.3959 23 6 4.1908 -2.4683 -0.4951 24 1 -0.3634 -0.0001 1.0277 25 1 -0.3634 0.8899 -0.5138 26 1 -0.3633 -0.8900 -0.5138 27 1 3.2659 1.0715 -0.0869 28 1 1.8704 1.8770 -0.8434 29 1 2.0008 1.8018 0.9302 30 1 3.6578 -1.9127 2.1197 31 1 3.6682 -0.1375 1.9892 32 1 5.9868 -0.2165 1.1125 33 1 5.8818 -0.9900 2.7119 34 1 8.0795 -1.5282 1.2096 35 1 7.6790 -6.7913 1.1128 36 1 11.1159 -7.2028 0.4868 37 1 10.4177 -7.3377 3.3016 38 1 8.4713 -8.4457 -0.2642 39 1 9.9061 -9.8956 1.0623 40 1 11.3742 -4.6594 1.3800 41 1 6.1068 -3.3971 -0.8183 42 1 6.1184 -1.6218 -0.9491 43 1 3.7899 -3.3177 0.0580 44 1 3.8945 -2.5436 -1.5414 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17310062_12175864.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:50:44 Heat of formation + Delta-G solvation = -4.408972 kcal Electronic energy + Delta-G solvation = -25472.499624 eV Core-core repulsion = 21812.763035 eV Total energy + Delta-G solvation = -3659.736589 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.168 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.09744 -41.37723 -39.35743 -37.98787 -36.55557 -36.02188 -34.66232 -32.84314 -31.92972 -30.76116 -28.91906 -27.26654 -26.42679 -25.80382 -24.03292 -23.70085 -22.86046 -21.35573 -20.04982 -19.31781 -18.68631 -18.12402 -18.04131 -17.29140 -16.73513 -16.56813 -16.46894 -16.09545 -15.76368 -15.58435 -15.26039 -15.14619 -14.88164 -14.57610 -14.38126 -14.04740 -13.92832 -13.71304 -13.55495 -13.43440 -13.25977 -13.19393 -13.08028 -12.62443 -12.35770 -12.20509 -12.19309 -11.83773 -11.74949 -11.72624 -11.40176 -11.10076 -10.63155 -10.54995 -9.98175 -9.73087 -9.08105 -5.08921 0.10027 0.19547 1.24465 1.58779 1.62967 1.79786 1.94532 1.98986 2.86326 3.16365 3.36838 3.43292 3.51347 3.59567 3.63737 3.73580 3.77318 3.86762 3.90206 4.07641 4.14357 4.21375 4.26286 4.29026 4.31133 4.36936 4.38294 4.51180 4.56726 4.58874 4.60579 4.69181 4.79514 4.86515 4.87144 4.90854 5.02104 5.13728 5.20661 5.23842 5.36748 5.43093 5.81113 6.04533 6.29944 6.43424 6.53015 7.17949 7.33066 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.082 3.918 2 N -0.624 5.624 3 C 0.070 3.930 4 C 0.516 3.484 5 O -0.534 6.534 6 C -0.110 4.110 7 H 0.096 0.904 8 C -0.102 4.102 9 C -0.125 4.125 10 C 0.159 3.841 11 H 0.096 0.904 12 N -0.692 5.692 13 C 0.569 3.431 14 N -0.560 5.560 15 C 0.200 3.800 16 C -0.295 4.295 17 C -0.045 4.045 18 O -0.541 6.541 19 Si 0.679 3.321 20 C 0.223 3.777 21 N -0.570 5.570 22 C -0.127 4.127 23 C -0.098 4.098 24 H 0.055 0.945 25 H 0.070 0.930 26 H 0.078 0.922 27 H 0.083 0.917 28 H 0.065 0.935 29 H 0.063 0.937 30 H 0.076 0.924 31 H 0.074 0.926 32 H 0.072 0.928 33 H 0.076 0.924 34 H 0.413 0.587 35 H 0.166 0.834 36 H 0.115 0.885 37 H 0.379 0.621 38 H -0.255 1.255 39 H -0.251 1.251 40 H 0.169 0.831 41 H 0.072 0.928 42 H 0.063 0.937 43 H 0.080 0.920 44 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.928 4.228 1.663 4.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 N -0.358 5.358 3 C -0.073 4.073 4 C 0.304 3.696 5 O -0.410 6.410 6 C -0.131 4.131 7 H 0.114 0.886 8 C -0.141 4.141 9 C -0.163 4.163 10 C 0.054 3.946 11 H 0.114 0.886 12 N -0.328 5.328 13 C 0.212 3.788 14 N -0.282 5.282 15 C 0.032 3.968 16 C -0.304 4.304 17 C -0.158 4.158 18 O -0.346 6.346 19 Si 0.581 3.419 20 C 0.055 3.945 21 N -0.292 5.292 22 C -0.166 4.166 23 C -0.136 4.136 24 H 0.074 0.926 25 H 0.089 0.911 26 H 0.097 0.903 27 H 0.101 0.899 28 H 0.084 0.916 29 H 0.081 0.919 30 H 0.094 0.906 31 H 0.092 0.908 32 H 0.090 0.910 33 H 0.095 0.905 34 H 0.251 0.749 35 H 0.183 0.817 36 H 0.132 0.868 37 H 0.226 0.774 38 H -0.180 1.180 39 H -0.175 1.175 40 H 0.186 0.814 41 H 0.091 0.909 42 H 0.082 0.918 43 H 0.098 0.902 44 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -1.697 3.872 0.714 4.288 hybrid contribution 1.024 0.222 -0.321 1.095 sum -0.674 4.094 0.394 4.168 Atomic orbital electron populations 1.21658 0.78980 1.03364 1.02045 1.47787 1.07295 1.06501 1.74213 1.21970 0.97691 0.85245 1.02351 1.20729 0.90064 0.83154 0.75612 1.90717 1.70338 1.31107 1.48851 1.21455 0.91515 1.01248 0.98868 0.88648 1.21401 0.95138 1.03472 0.94043 1.21798 0.95352 0.97139 1.02001 1.21042 0.77733 0.99240 0.96589 0.88579 1.44280 1.06310 1.03937 1.78244 1.19395 0.85214 0.86760 0.87414 1.67933 1.40429 0.97663 1.22157 1.22771 0.90779 0.95380 0.87826 1.21701 0.96215 0.98572 1.13890 1.24686 1.02359 0.99419 0.89307 1.86508 1.37291 1.95901 1.14887 0.94992 0.82380 0.77674 0.86899 1.22826 1.00351 0.85689 0.85662 1.67986 1.06946 1.32006 1.22248 1.21948 0.95508 1.02847 0.96337 1.21331 0.94215 0.96399 1.01667 0.92593 0.91134 0.90345 0.89869 0.91628 0.91876 0.90560 0.90751 0.90959 0.90491 0.74932 0.81729 0.86757 0.77373 1.17961 1.17535 0.81355 0.90889 0.91809 0.90152 0.91230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.03 10.51 59.85 0.63 0.60 16 2 N -0.62 0.02 3.27 -189.52 -0.62 -0.60 16 3 C 0.07 -0.24 10.32 59.85 0.62 0.38 16 4 C 0.52 0.99 6.79 -10.99 -0.07 0.92 16 5 O -0.53 -3.24 15.63 5.55 0.09 -3.15 16 6 C -0.11 0.12 1.69 -91.78 -0.16 -0.04 16 7 H 0.10 -0.27 6.11 -51.93 -0.32 -0.59 16 8 C -0.10 0.22 5.16 -26.74 -0.14 0.08 16 9 C -0.12 0.36 5.39 -26.73 -0.14 0.21 16 10 C 0.16 -0.14 2.45 -67.93 -0.17 -0.31 16 11 H 0.10 0.06 7.50 -51.93 -0.39 -0.33 16 12 N -0.69 -0.05 5.22 -55.79 -0.29 -0.35 16 13 C 0.57 1.33 8.40 -322.80 -2.71 -1.39 16 14 N -0.56 -1.23 9.20 -13.93 -0.13 -1.36 16 15 C 0.20 0.07 9.92 -17.23 -0.17 -0.10 16 16 C -0.30 0.00 5.36 -104.35 -0.56 -0.56 16 17 C -0.05 0.05 2.83 36.01 0.10 0.15 16 18 O -0.54 0.31 12.85 -35.23 -0.45 -0.14 16 19 Si 0.68 -1.11 29.89 -169.99 -5.08 -6.19 16 20 C 0.22 0.25 10.99 -17.22 -0.19 0.06 16 21 N -0.57 -1.53 10.46 -13.93 -0.15 -1.67 16 22 C -0.13 0.06 5.50 -26.76 -0.15 -0.08 16 23 C -0.10 -0.01 4.71 -26.76 -0.13 -0.14 16 24 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.07 -0.17 8.07 -51.93 -0.42 -0.59 16 26 H 0.08 0.10 7.37 -51.93 -0.38 -0.28 16 27 H 0.08 -0.38 5.27 -51.93 -0.27 -0.66 16 28 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 29 H 0.06 -0.26 8.14 -51.93 -0.42 -0.69 16 30 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.07 -0.23 7.90 -51.93 -0.41 -0.64 16 32 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.41 -0.47 8.72 -40.82 -0.36 -0.83 16 35 H 0.17 -0.35 5.07 -52.49 -0.27 -0.62 16 36 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 37 H 0.38 -1.58 8.70 45.56 0.40 -1.18 16 38 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 39 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 40 H 0.17 -0.11 8.06 -52.49 -0.42 -0.53 16 41 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 42 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 43 H 0.08 0.15 7.88 -51.93 -0.41 -0.26 16 44 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 LS Contribution 352.66 15.07 5.31 5.31 Total: 0.00 -8.83 352.66 -11.22 -20.05 By element: Atomic # 1 Polarization: -5.02 SS G_CDS: -6.67 Total: -11.68 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: -3.24 Total: -0.22 kcal Atomic # 7 Polarization: -2.79 SS G_CDS: -1.19 Total: -3.98 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.37 Total: -3.29 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.08 Total: -6.19 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -8.83 -11.22 -20.05 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17310062_12175864.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.640 kcal (2) G-P(sol) polarization free energy of solvation -8.831 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.409 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds