Wall clock time and date at job start Mon Mar 8 2021 08:50:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.46497 * 119.99410 * 2 1 4 4 C 1.34774 * 120.00266 * 179.97438 * 2 1 3 5 5 O 1.21283 * 119.99890 * 4.29166 * 4 2 1 6 6 C 1.50693 * 119.99946 * 184.28478 * 4 2 1 7 7 H 1.09005 * 109.47582 * 323.66401 * 6 4 2 8 8 C 1.52995 * 109.47327 * 83.66580 * 6 4 2 9 9 C 1.52995 * 109.47845 * 179.97438 * 8 6 4 10 10 C 1.53000 * 109.46926 * 300.00455 * 9 8 6 11 11 H 1.09005 * 109.47028 * 299.99393 * 10 9 8 12 12 N 1.46502 * 109.47032 * 179.97438 * 10 9 8 13 13 C 1.38414 * 120.00036 * 154.99547 * 12 10 9 14 14 N 1.32496 * 119.21329 * 359.73635 * 13 12 10 15 15 C 1.32274 * 120.73366 * 179.71740 * 14 13 12 16 16 C 1.38603 * 119.20067 * 0.54109 * 15 14 13 17 17 C 1.50700 * 120.72262 * 179.71222 * 16 15 14 18 18 O 1.42899 * 109.47001 * 245.02254 * 17 16 15 19 19 Si 1.86305 * 109.47201 * 5.01787 * 17 16 15 20 20 C 1.38607 * 118.55735 * 359.72563 * 16 15 14 21 21 N 1.32276 * 119.19513 * 0.02562 * 20 16 15 22 22 C 1.52998 * 109.47376 * 59.99693 * 10 9 8 23 23 C 1.52995 * 109.47335 * 203.66581 * 6 4 2 24 24 H 1.09004 * 109.47435 * 269.99496 * 1 2 3 25 25 H 1.08993 * 109.47783 * 30.00329 * 1 2 3 26 26 H 1.09000 * 109.46992 * 150.00160 * 1 2 3 27 27 H 1.09003 * 109.46923 * 184.85333 * 3 2 1 28 28 H 1.09002 * 109.47172 * 304.84994 * 3 2 1 29 29 H 1.08999 * 109.47517 * 64.85076 * 3 2 1 30 30 H 1.09005 * 109.46931 * 59.99983 * 8 6 4 31 31 H 1.09006 * 109.47282 * 300.00388 * 8 6 4 32 32 H 1.09005 * 109.47225 * 59.99722 * 9 8 6 33 33 H 1.08999 * 109.47740 * 179.97438 * 9 8 6 34 34 H 0.97000 * 120.00504 * 334.99708 * 12 10 9 35 35 H 1.08001 * 120.40002 * 180.29321 * 15 14 13 36 36 H 1.08997 * 109.47272 * 125.01853 * 17 16 15 37 37 H 0.96696 * 114.00580 * 59.99164 * 18 17 16 38 38 H 1.48496 * 109.99796 * 58.67985 * 19 17 16 39 39 H 1.48491 * 109.99963 * 180.02562 * 19 17 16 40 40 H 1.08002 * 120.39822 * 180.02562 * 20 16 15 41 41 H 1.09001 * 109.47333 * 180.02562 * 22 10 9 42 42 H 1.08995 * 109.47295 * 59.99861 * 22 10 9 43 43 H 1.09005 * 109.47095 * 300.00123 * 23 6 4 44 44 H 1.08999 * 109.47637 * 59.99989 * 23 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.1389 -1.1671 0.0005 5 8 1.5351 -2.2161 -0.0776 6 6 3.6427 -1.1688 0.0980 7 1 4.0437 -0.3195 -0.4551 8 6 4.0587 -1.0633 1.5665 9 6 5.5855 -1.0657 1.6657 10 6 6.1330 -2.3654 1.0727 11 1 5.7317 -3.2146 1.6259 12 7 7.5950 -2.3674 1.1671 13 6 8.2850 -3.5670 1.1956 14 7 7.6073 -4.7042 1.1420 15 6 8.2365 -5.8676 1.1616 16 6 9.6195 -5.8870 1.2507 17 6 10.3708 -7.1930 1.2822 18 8 11.0213 -7.3380 2.5462 19 14 9.1776 -8.6019 1.0327 20 6 10.2966 -4.6790 1.3105 21 7 9.6070 -3.5507 1.2815 22 6 5.7171 -2.4709 -0.3959 23 6 4.1908 -2.4683 -0.4951 24 1 -0.3634 -0.0001 1.0277 25 1 -0.3634 0.8899 -0.5138 26 1 -0.3633 -0.8900 -0.5138 27 1 3.2659 1.0715 -0.0869 28 1 1.8704 1.8770 -0.8434 29 1 2.0008 1.8018 0.9302 30 1 3.6578 -1.9127 2.1197 31 1 3.6682 -0.1375 1.9892 32 1 5.9868 -0.2165 1.1125 33 1 5.8818 -0.9900 2.7119 34 1 8.0795 -1.5282 1.2096 35 1 7.6790 -6.7913 1.1128 36 1 11.1159 -7.2028 0.4868 37 1 10.4177 -7.3377 3.3016 38 1 8.4713 -8.4457 -0.2642 39 1 9.9061 -9.8956 1.0623 40 1 11.3742 -4.6594 1.3800 41 1 6.1068 -3.3971 -0.8183 42 1 6.1184 -1.6218 -0.9491 43 1 3.7899 -3.3177 0.0580 44 1 3.8945 -2.5436 -1.5414 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17310062_12175864.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:50:43 Heat of formation + Delta-G solvation = -3.558539 kcal Electronic energy + Delta-G solvation = -25472.462746 eV Core-core repulsion = 21812.763035 eV Total energy + Delta-G solvation = -3659.699711 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.168 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.13950 -41.42175 -39.35462 -37.94434 -36.61587 -36.01706 -34.73352 -32.84535 -31.86203 -30.73421 -28.78943 -27.22040 -26.40810 -25.84218 -23.98266 -23.64851 -22.86998 -21.30173 -20.05801 -19.32708 -18.70936 -18.12781 -18.00924 -17.30286 -16.73664 -16.57687 -16.43131 -16.09109 -15.76190 -15.56522 -15.19850 -15.11811 -14.83183 -14.58573 -14.39685 -14.09664 -13.91698 -13.52350 -13.42337 -13.36996 -13.21364 -13.18501 -12.99438 -12.62455 -12.29348 -12.27106 -12.10291 -11.90724 -11.77336 -11.72366 -11.35088 -11.07446 -10.74352 -10.52743 -10.03857 -9.72870 -9.09697 -5.00297 0.05546 0.13963 1.31647 1.53553 1.63498 1.80943 1.97724 2.04261 2.80030 3.16444 3.42171 3.55102 3.60242 3.66139 3.68070 3.72155 3.80473 3.96254 4.07039 4.15544 4.23241 4.29151 4.35378 4.42625 4.45481 4.46877 4.48612 4.56421 4.63563 4.73258 4.78113 4.81234 4.88274 4.90000 4.96178 5.03955 5.13412 5.15690 5.22165 5.27535 5.40592 5.46881 5.78020 6.06216 6.31504 6.42749 6.78578 7.11051 7.28877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.623 5.623 3 C 0.063 3.937 4 C 0.507 3.493 5 O -0.589 6.589 6 C -0.101 4.101 7 H 0.124 0.876 8 C -0.096 4.096 9 C -0.114 4.114 10 C 0.162 3.838 11 H 0.076 0.924 12 N -0.686 5.686 13 C 0.553 3.447 14 N -0.578 5.578 15 C 0.193 3.807 16 C -0.288 4.288 17 C -0.044 4.044 18 O -0.554 6.554 19 Si 0.763 3.237 20 C 0.213 3.787 21 N -0.588 5.588 22 C -0.117 4.117 23 C -0.093 4.093 24 H 0.058 0.942 25 H 0.094 0.906 26 H 0.053 0.947 27 H 0.099 0.901 28 H 0.076 0.924 29 H 0.077 0.923 30 H 0.056 0.944 31 H 0.093 0.907 32 H 0.095 0.905 33 H 0.082 0.918 34 H 0.420 0.580 35 H 0.185 0.815 36 H 0.114 0.886 37 H 0.395 0.605 38 H -0.287 1.287 39 H -0.295 1.295 40 H 0.182 0.818 41 H 0.051 0.949 42 H 0.077 0.923 43 H 0.055 0.945 44 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.287 6.090 2.116 6.454 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.356 5.356 3 C -0.078 4.078 4 C 0.297 3.703 5 O -0.469 6.469 6 C -0.122 4.122 7 H 0.141 0.859 8 C -0.135 4.135 9 C -0.152 4.152 10 C 0.057 3.943 11 H 0.094 0.906 12 N -0.322 5.322 13 C 0.197 3.803 14 N -0.300 5.300 15 C 0.026 3.974 16 C -0.297 4.297 17 C -0.156 4.156 18 O -0.361 6.361 19 Si 0.669 3.331 20 C 0.045 3.955 21 N -0.311 5.311 22 C -0.156 4.156 23 C -0.132 4.132 24 H 0.077 0.923 25 H 0.112 0.888 26 H 0.072 0.928 27 H 0.117 0.883 28 H 0.095 0.905 29 H 0.095 0.905 30 H 0.075 0.925 31 H 0.111 0.889 32 H 0.113 0.887 33 H 0.101 0.899 34 H 0.258 0.742 35 H 0.202 0.798 36 H 0.132 0.868 37 H 0.244 0.756 38 H -0.214 1.214 39 H -0.222 1.222 40 H 0.199 0.801 41 H 0.069 0.931 42 H 0.096 0.904 43 H 0.074 0.926 44 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -1.055 5.801 1.195 6.016 hybrid contribution 0.814 -0.384 -0.482 1.021 sum -0.240 5.417 0.712 5.469 Atomic orbital electron populations 1.21706 0.79176 1.03322 1.02238 1.47973 1.07594 1.07240 1.72777 1.22236 0.98273 0.83716 1.03598 1.21279 0.91241 0.82949 0.74851 1.90689 1.71522 1.33110 1.51568 1.21449 0.89490 1.01277 0.99991 0.85867 1.21372 0.95643 1.03593 0.92881 1.21740 0.94474 0.96496 1.02525 1.21006 0.77327 0.99891 0.96053 0.90557 1.44310 1.06485 1.03640 1.77727 1.19668 0.85432 0.87438 0.87809 1.67976 1.40966 0.98225 1.22871 1.23150 0.91266 0.95680 0.87297 1.21748 0.96030 0.98686 1.13209 1.24742 1.02376 0.99042 0.89432 1.86476 1.38326 1.95812 1.15510 0.93985 0.80159 0.74319 0.84642 1.23143 1.01075 0.85792 0.85489 1.68008 1.07174 1.32763 1.23129 1.21827 0.94687 1.02280 0.96773 1.21227 0.94685 0.96539 1.00708 0.92318 0.88751 0.92767 0.88306 0.90538 0.90478 0.92469 0.88898 0.88689 0.89910 0.74179 0.79843 0.86828 0.75554 1.21368 1.22212 0.80061 0.93067 0.90418 0.92610 0.92312 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.04 10.51 127.77 1.34 1.31 16 2 N -0.62 0.25 3.27 -871.90 -2.85 -2.60 16 3 C 0.06 -0.56 10.32 127.77 1.32 0.75 16 4 C 0.51 2.37 6.79 87.66 0.60 2.97 16 5 O -0.59 -8.66 15.63 -3.04 -0.05 -8.71 16 6 C -0.10 0.23 1.69 -11.55 -0.02 0.22 16 7 H 0.12 -0.98 6.11 -2.38 -0.01 -0.99 16 8 C -0.10 0.49 5.16 30.59 0.16 0.64 16 9 C -0.11 0.81 5.39 30.59 0.16 0.97 16 10 C 0.16 -0.25 2.45 44.99 0.11 -0.14 16 11 H 0.08 0.21 7.50 -2.38 -0.02 0.19 16 12 N -0.69 -0.13 5.22 -330.42 -1.73 -1.85 16 13 C 0.55 2.90 8.40 261.48 2.20 5.09 16 14 N -0.58 -3.08 9.20 -197.98 -1.82 -4.90 16 15 C 0.19 0.23 9.92 84.71 0.84 1.07 16 16 C -0.29 -0.03 5.36 -19.69 -0.11 -0.13 16 17 C -0.04 0.10 2.83 71.24 0.20 0.30 16 18 O -0.55 0.94 12.85 -148.98 -1.91 -0.98 16 19 Si 0.76 -2.31 29.89 68.60 2.05 -0.26 16 20 C 0.21 0.50 10.99 84.71 0.93 1.43 16 21 N -0.59 -3.35 10.46 -197.98 -2.07 -5.42 16 22 C -0.12 0.05 5.50 30.58 0.17 0.22 16 23 C -0.09 -0.16 4.71 30.58 0.14 -0.02 16 24 H 0.06 -0.06 8.14 -2.38 -0.02 -0.08 16 25 H 0.09 -0.53 8.07 -2.39 -0.02 -0.55 16 26 H 0.05 0.25 7.37 -2.39 -0.02 0.24 16 27 H 0.10 -1.20 5.27 -2.39 -0.01 -1.21 16 28 H 0.08 -0.80 8.14 -2.39 -0.02 -0.81 16 29 H 0.08 -0.85 8.14 -2.39 -0.02 -0.86 16 30 H 0.06 -0.04 8.14 -2.38 -0.02 -0.06 16 31 H 0.09 -0.77 7.90 -2.38 -0.02 -0.78 16 32 H 0.09 -1.03 8.14 -2.38 -0.02 -1.05 16 33 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 34 H 0.42 -1.23 8.72 -92.71 -0.81 -2.04 16 35 H 0.19 -0.75 5.07 -2.91 -0.01 -0.76 16 36 H 0.11 -0.22 7.96 -2.39 -0.02 -0.24 16 37 H 0.39 -3.60 8.70 -74.06 -0.64 -4.24 16 38 H -0.29 -0.67 7.11 99.48 0.71 0.04 16 39 H -0.29 -1.31 7.11 99.48 0.71 -0.60 16 40 H 0.18 -0.25 8.06 -2.91 -0.02 -0.27 16 41 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 42 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 43 H 0.06 0.37 7.88 -2.38 -0.02 0.35 16 44 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 Total: 0.00 -23.52 352.66 -0.73 -24.24 By element: Atomic # 1 Polarization: -13.83 SS G_CDS: -0.39 Total: -14.22 kcal Atomic # 6 Polarization: 6.64 SS G_CDS: 8.05 Total: 14.69 kcal Atomic # 7 Polarization: -6.30 SS G_CDS: -8.47 Total: -14.77 kcal Atomic # 8 Polarization: -7.72 SS G_CDS: -1.96 Total: -9.68 kcal Atomic # 14 Polarization: -2.31 SS G_CDS: 2.05 Total: -0.26 kcal Total: -23.52 -0.73 -24.24 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17310062_12175864.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.684 kcal (2) G-P(sol) polarization free energy of solvation -23.516 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.242 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds