Wall clock time and date at job start Mon Mar 8 2021 08:50:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.46504 * 120.00184 * 2 1 4 4 C 1.34778 * 120.00466 * 180.02562 * 2 1 3 5 5 O 1.21284 * 119.99514 * 5.02420 * 4 2 1 6 6 C 1.50699 * 120.00540 * 185.02638 * 4 2 1 7 7 H 1.09001 * 109.46899 * 25.74296 * 6 4 2 8 8 C 1.52997 * 109.47240 * 145.74398 * 6 4 2 9 9 C 1.52993 * 109.47195 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47654 * 300.00383 * 9 8 6 11 11 H 1.08993 * 109.46860 * 299.99937 * 10 9 8 12 12 N 1.46497 * 109.47652 * 179.97438 * 10 9 8 13 13 C 1.38996 * 120.00133 * 154.72229 * 12 10 9 14 14 N 1.32394 * 119.70954 * 180.27679 * 13 12 10 15 15 C 1.31971 * 121.62933 * 179.97438 * 14 13 12 16 16 C 1.38024 * 120.85049 * 0.02562 * 15 14 13 17 17 C 1.50699 * 120.33309 * 179.97438 * 16 15 14 18 18 O 1.42902 * 109.47060 * 245.00119 * 17 16 15 19 19 Si 1.86305 * 109.47150 * 4.99760 * 17 16 15 20 20 C 1.38881 * 119.33572 * 359.97420 * 16 15 14 21 21 C 1.38308 * 118.49983 * 359.73403 * 20 16 15 22 22 C 1.53006 * 109.46736 * 59.99518 * 10 9 8 23 23 C 1.52997 * 109.47293 * 300.00094 * 22 10 9 24 24 H 1.09008 * 109.47000 * 269.99172 * 1 2 3 25 25 H 1.08996 * 109.47806 * 29.99560 * 1 2 3 26 26 H 1.09006 * 109.47170 * 149.99907 * 1 2 3 27 27 H 1.08996 * 109.47461 * 238.04252 * 3 2 1 28 28 H 1.09005 * 109.46805 * 358.04099 * 3 2 1 29 29 H 1.08994 * 109.46896 * 118.03681 * 3 2 1 30 30 H 1.09001 * 109.47258 * 60.00117 * 8 6 4 31 31 H 1.09001 * 109.47385 * 300.00259 * 8 6 4 32 32 H 1.08999 * 109.47863 * 179.97438 * 9 8 6 33 33 H 1.09007 * 109.46892 * 60.00445 * 9 8 6 34 34 H 0.97004 * 119.99743 * 335.00418 * 12 10 9 35 35 H 1.08001 * 119.57732 * 180.02562 * 15 14 13 36 36 H 1.09000 * 109.47690 * 124.99983 * 17 16 15 37 37 H 0.96705 * 114.00034 * 180.02562 * 18 17 16 38 38 H 1.48503 * 110.00053 * 178.68304 * 19 17 16 39 39 H 1.48496 * 110.00023 * 300.00062 * 19 17 16 40 40 H 1.07996 * 120.75104 * 179.97438 * 20 16 15 41 41 H 1.08000 * 120.44704 * 180.28461 * 21 20 16 42 42 H 1.08993 * 109.47104 * 60.00568 * 22 10 9 43 43 H 1.09001 * 109.46531 * 180.02562 * 22 10 9 44 44 H 1.09001 * 109.47274 * 300.00547 * 23 22 10 45 45 H 1.09001 * 109.46963 * 179.97438 * 23 22 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.1389 -1.1672 -0.0005 5 8 1.5360 -2.2154 -0.0930 6 6 3.6416 -1.1697 0.1138 7 1 3.9684 -0.2653 0.6270 8 6 4.0905 -2.3976 0.9086 9 6 5.6160 -2.4006 1.0241 10 6 6.2335 -2.4449 -0.3751 11 1 5.9063 -3.3492 -0.8881 12 7 7.6943 -2.4471 -0.2645 13 6 8.4675 -2.9949 -1.2815 14 7 9.7869 -2.9987 -1.1730 15 6 10.5573 -3.5091 -2.1152 16 6 10.0095 -4.0606 -3.2558 17 6 10.9002 -4.6397 -4.3245 18 8 10.7714 -3.8691 -5.5211 19 14 12.6710 -4.5983 -3.7469 20 6 8.6292 -4.0764 -3.4086 21 6 7.8476 -3.5397 -2.4017 22 6 5.7845 -1.2170 -1.1698 23 6 4.2589 -1.2141 -1.2854 24 1 -0.3633 -0.0001 1.0277 25 1 -0.3634 0.8900 -0.5137 26 1 -0.3634 -0.8900 -0.5139 27 1 2.8502 1.3115 -0.8719 28 1 1.4896 2.0969 -0.0351 29 1 2.7974 1.3418 0.9070 30 1 3.7636 -3.3020 0.3954 31 1 3.6503 -2.3662 1.9052 32 1 5.9359 -3.2751 1.5906 33 1 5.9433 -1.4962 1.5371 34 1 8.1218 -2.0700 0.5203 35 1 11.6302 -3.4952 -1.9922 36 1 10.6068 -5.6705 -4.5230 37 1 11.3176 -4.1857 -6.2536 38 1 13.5560 -5.1957 -4.7789 39 1 13.0833 -3.1982 -3.4731 40 1 8.1763 -4.5018 -4.2919 41 1 6.7709 -3.5398 -2.4858 42 1 6.1117 -0.3127 -0.6569 43 1 6.2240 -1.2488 -2.1668 44 1 3.9317 -2.1185 -1.7984 45 1 3.9391 -0.3391 -1.8512 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17310062_13915762.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:50:47 Heat of formation + Delta-G solvation = -22.739726 kcal Electronic energy + Delta-G solvation = -25297.706954 eV Core-core repulsion = 21702.601395 eV Total energy + Delta-G solvation = -3595.105559 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.173 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.61804 -41.13340 -39.32737 -37.87199 -36.57257 -35.93028 -33.46559 -32.29784 -31.83737 -30.46276 -28.92487 -27.25733 -26.11169 -24.88124 -23.79103 -23.75366 -22.19426 -21.25359 -20.11455 -18.65939 -18.48073 -18.11276 -18.00936 -17.25030 -16.76393 -16.58294 -16.34557 -15.80097 -15.62399 -15.25529 -15.05268 -14.94389 -14.75991 -14.25719 -14.10677 -14.04955 -13.84884 -13.80693 -13.77102 -13.67334 -13.43575 -13.33285 -12.99856 -12.64268 -12.41775 -12.32001 -12.19453 -11.91555 -11.72560 -11.47257 -10.97687 -10.69000 -10.62233 -10.52388 -10.23441 -9.73259 -8.63714 -4.94031 0.33297 0.51495 1.31894 1.60115 1.61043 1.94149 1.97869 2.10110 2.87835 3.36562 3.44128 3.46799 3.52802 3.68475 3.85624 3.89074 3.95801 4.02284 4.02622 4.07717 4.15934 4.17502 4.22802 4.23706 4.33296 4.35395 4.39338 4.48756 4.52962 4.58424 4.61758 4.66161 4.79331 4.83003 4.84651 4.91381 4.98795 5.01664 5.10504 5.14126 5.23451 5.38506 5.40348 5.59534 6.06533 6.27307 6.47568 6.60083 7.15254 7.24182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.624 5.624 3 C 0.077 3.923 4 C 0.518 3.482 5 O -0.535 6.535 6 C -0.107 4.107 7 H 0.093 0.907 8 C -0.099 4.099 9 C -0.124 4.124 10 C 0.153 3.847 11 H 0.086 0.914 12 N -0.719 5.719 13 C 0.409 3.591 14 N -0.540 5.540 15 C 0.158 3.842 16 C -0.189 4.189 17 C -0.060 4.060 18 O -0.538 6.538 19 Si 0.677 3.323 20 C -0.005 4.005 21 C -0.240 4.240 22 C -0.133 4.133 23 C -0.104 4.104 24 H 0.055 0.945 25 H 0.070 0.930 26 H 0.078 0.922 27 H 0.064 0.936 28 H 0.080 0.920 29 H 0.063 0.937 30 H 0.080 0.920 31 H 0.072 0.928 32 H 0.077 0.923 33 H 0.071 0.929 34 H 0.405 0.595 35 H 0.155 0.845 36 H 0.074 0.926 37 H 0.378 0.622 38 H -0.260 1.260 39 H -0.253 1.253 40 H 0.134 0.866 41 H 0.134 0.866 42 H 0.071 0.929 43 H 0.073 0.927 44 H 0.074 0.926 45 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.399 1.766 1.130 2.134 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.359 5.359 3 C -0.066 4.066 4 C 0.306 3.694 5 O -0.412 6.412 6 C -0.129 4.129 7 H 0.111 0.889 8 C -0.137 4.137 9 C -0.162 4.162 10 C 0.048 3.952 11 H 0.104 0.896 12 N -0.350 5.350 13 C 0.174 3.826 14 N -0.256 5.256 15 C 0.001 3.999 16 C -0.194 4.194 17 C -0.171 4.171 18 O -0.345 6.345 19 Si 0.578 3.422 20 C -0.031 4.031 21 C -0.264 4.264 22 C -0.172 4.172 23 C -0.143 4.143 24 H 0.074 0.926 25 H 0.089 0.911 26 H 0.097 0.903 27 H 0.082 0.918 28 H 0.098 0.902 29 H 0.082 0.918 30 H 0.099 0.901 31 H 0.091 0.909 32 H 0.096 0.904 33 H 0.090 0.910 34 H 0.241 0.759 35 H 0.172 0.828 36 H 0.092 0.908 37 H 0.226 0.774 38 H -0.185 1.185 39 H -0.178 1.178 40 H 0.152 0.848 41 H 0.152 0.848 42 H 0.090 0.910 43 H 0.091 0.909 44 H 0.093 0.907 45 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -0.174 2.195 2.024 2.991 hybrid contribution -0.418 0.210 -1.691 1.755 sum -0.592 2.405 0.332 2.499 Atomic orbital electron populations 1.21716 0.78979 1.03407 1.02023 1.47813 1.07279 1.06529 1.74256 1.21860 0.97524 0.85208 1.01976 1.20710 0.90036 0.83105 0.75583 1.90712 1.70395 1.31199 1.48855 1.21415 0.91150 1.01434 0.98862 0.88856 1.21350 0.94230 0.97605 1.00560 1.21785 0.95280 1.03412 0.95729 1.21054 0.78452 0.98781 0.96948 0.89646 1.44578 1.04624 1.64846 1.21003 1.18382 0.87897 0.88869 0.87470 1.67170 1.03990 1.22832 1.31643 1.22189 0.98833 0.90629 0.88293 1.19899 0.94604 1.07722 0.97189 1.24529 1.09531 0.96122 0.86879 1.86601 1.68650 1.57291 1.21999 0.95167 0.74330 0.84227 0.88460 1.21173 0.92489 0.92600 0.96816 1.21481 1.01133 1.08016 0.95803 1.22042 0.94869 0.98872 1.01392 1.21431 0.94866 1.03377 0.94596 0.92605 0.91092 0.90345 0.91766 0.90165 0.91844 0.90107 0.90923 0.90403 0.90989 0.75891 0.82838 0.90823 0.77392 1.18529 1.17801 0.84844 0.84814 0.91032 0.90883 0.90712 0.91089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.05 10.45 59.84 0.63 0.58 16 2 N -0.62 0.07 3.27 -189.52 -0.62 -0.55 16 3 C 0.08 -0.26 9.52 59.85 0.57 0.31 16 4 C 0.52 0.89 6.67 -10.99 -0.07 0.81 16 5 O -0.54 -3.07 15.81 5.55 0.09 -2.98 16 6 C -0.11 0.14 1.96 -91.77 -0.18 -0.04 16 7 H 0.09 -0.27 6.45 -51.93 -0.33 -0.60 16 8 C -0.10 0.10 4.85 -26.74 -0.13 -0.03 16 9 C -0.12 0.29 5.39 -26.73 -0.14 0.15 16 10 C 0.15 -0.25 2.14 -67.93 -0.15 -0.39 16 11 H 0.09 -0.10 6.43 -51.93 -0.33 -0.44 16 12 N -0.72 0.07 5.24 -53.93 -0.28 -0.22 16 13 C 0.41 0.91 7.63 -155.03 -1.18 -0.27 16 14 N -0.54 -1.91 10.39 -12.44 -0.13 -2.04 16 15 C 0.16 0.39 9.84 -17.57 -0.17 0.22 16 16 C -0.19 -0.37 5.39 -104.46 -0.56 -0.94 16 17 C -0.06 -0.02 2.81 36.01 0.10 0.08 16 18 O -0.54 -0.79 12.82 -35.23 -0.45 -1.24 16 19 Si 0.68 -0.38 29.88 -169.99 -5.08 -5.46 16 20 C 0.00 -0.01 9.84 -39.32 -0.39 -0.40 16 21 C -0.24 -0.35 8.86 -39.22 -0.35 -0.70 16 22 C -0.13 0.26 5.43 -26.73 -0.15 0.11 16 23 C -0.10 0.18 5.18 -26.73 -0.14 0.04 16 24 H 0.06 -0.05 8.14 -51.92 -0.42 -0.47 16 25 H 0.07 -0.19 7.90 -51.93 -0.41 -0.60 16 26 H 0.08 0.09 7.36 -51.93 -0.38 -0.29 16 27 H 0.06 -0.26 7.37 -51.93 -0.38 -0.64 16 28 H 0.08 -0.36 7.78 -51.93 -0.40 -0.76 16 29 H 0.06 -0.27 7.33 -51.93 -0.38 -0.65 16 30 H 0.08 0.04 7.85 -51.93 -0.41 -0.37 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 33 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.41 -0.26 8.73 -40.82 -0.36 -0.62 16 35 H 0.15 0.09 4.87 -52.49 -0.26 -0.16 16 36 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 37 H 0.38 -0.96 8.74 45.56 0.40 -0.56 16 38 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 39 H -0.25 -0.64 7.05 56.52 0.40 -0.24 16 40 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 41 H 0.13 -0.03 6.10 -52.49 -0.32 -0.35 16 42 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.07 -0.06 7.71 -51.93 -0.40 -0.46 16 44 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 45 H 0.07 -0.15 7.41 -51.93 -0.38 -0.54 16 LS Contribution 354.47 15.07 5.34 5.34 Total: 0.00 -8.55 354.47 -10.38 -18.92 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -6.93 Total: -11.33 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -2.31 Total: -0.45 kcal Atomic # 7 Polarization: -1.77 SS G_CDS: -1.03 Total: -2.80 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.36 Total: -4.21 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.08 Total: -5.46 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -8.55 -10.38 -18.92 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17310062_13915762.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.818 kcal (2) G-P(sol) polarization free energy of solvation -8.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.740 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds