Wall clock time and date at job start Mon Mar 8 2021 08:50:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33329 * 125.94840 * 2 1 4 4 C 1.50698 * 122.70858 * 359.96481 * 3 2 1 5 5 O 1.42900 * 109.47494 * 329.99915 * 4 3 2 6 6 Si 1.86306 * 109.46820 * 209.99661 * 4 3 2 7 7 N 1.32117 * 114.57659 * 179.79019 * 3 2 1 8 8 C 1.29680 * 116.86756 * 0.51986 * 7 3 2 9 9 N 1.38619 * 124.95194 * 179.71888 * 8 7 3 10 10 C 1.46500 * 120.00285 * 180.02562 * 9 8 7 11 11 H 1.09000 * 109.47064 * 34.98966 * 10 9 8 12 12 C 1.52993 * 109.47333 * 154.99853 * 10 9 8 13 13 C 1.52994 * 109.47147 * 179.97438 * 12 10 9 14 14 C 1.53001 * 109.47257 * 299.99814 * 13 12 10 15 15 H 1.08999 * 109.47308 * 300.00109 * 14 13 12 16 16 C 1.50700 * 109.46953 * 179.97438 * 14 13 12 17 17 O 1.21279 * 120.00347 * 359.97438 * 16 14 13 18 18 N 1.34780 * 120.00112 * 180.02562 * 16 14 13 19 19 C 1.46500 * 120.00487 * 180.02562 * 18 16 14 20 20 C 1.46498 * 119.99674 * 359.97438 * 18 16 14 21 21 C 1.53002 * 109.46783 * 60.00158 * 14 13 12 22 22 C 1.52994 * 109.47095 * 299.99941 * 21 14 13 23 23 S 1.70970 * 110.10225 * 359.71512 * 8 7 3 24 24 H 1.09001 * 109.46953 * 179.71216 * 1 2 3 25 25 H 1.09000 * 109.47318 * 299.70813 * 1 2 3 26 26 H 1.09000 * 109.47161 * 59.71444 * 1 2 3 27 27 H 1.09000 * 109.47423 * 89.99830 * 4 3 2 28 28 H 0.96699 * 113.99787 * 180.02562 * 5 4 3 29 29 H 1.48497 * 109.99880 * 298.68114 * 6 4 3 30 30 H 1.48498 * 110.00078 * 60.00433 * 6 4 3 31 31 H 0.97002 * 119.99652 * 0.02562 * 9 8 7 32 32 H 1.09002 * 109.46908 * 300.00171 * 12 10 9 33 33 H 1.08999 * 109.47079 * 59.99822 * 12 10 9 34 34 H 1.08999 * 109.47051 * 60.00081 * 13 12 10 35 35 H 1.09001 * 109.47507 * 180.02562 * 13 12 10 36 36 H 1.09003 * 109.46936 * 59.99369 * 19 18 16 37 37 H 1.08999 * 109.47166 * 179.97438 * 19 18 16 38 38 H 1.08999 * 109.46958 * 299.99913 * 19 18 16 39 39 H 1.09003 * 109.47378 * 89.99927 * 20 18 16 40 40 H 1.09001 * 109.47248 * 210.00265 * 20 18 16 41 41 H 1.09001 * 109.47317 * 329.99950 * 20 18 16 42 42 H 1.08999 * 109.47238 * 59.99909 * 21 14 13 43 43 H 1.09002 * 109.46801 * 179.97438 * 21 14 13 44 44 H 1.08999 * 109.47051 * 300.00082 * 22 21 14 45 45 H 1.09003 * 109.46914 * 180.02562 * 22 21 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7413 2.4830 -0.0008 5 8 0.4815 2.5019 -0.6750 6 14 2.9327 3.6147 -0.8788 7 7 3.5850 0.8189 0.0044 8 6 3.9315 -0.4308 -0.0024 9 7 5.2385 -0.8924 -0.0049 10 6 5.5067 -2.3327 -0.0132 11 1 4.7457 -2.8405 -0.6057 12 6 6.8854 -2.5912 -0.6242 13 6 7.1657 -4.0952 -0.6323 14 6 7.1355 -4.6274 0.8018 15 1 7.8964 -4.1193 1.3941 16 6 7.4109 -6.1090 0.7937 17 8 7.6112 -6.6829 -0.2558 18 7 7.4338 -6.7967 1.9526 19 6 7.7021 -8.2368 1.9448 20 6 7.1913 -6.1036 3.2203 21 6 5.7567 -4.3689 1.4127 22 6 5.4764 -2.8649 1.4209 23 16 2.5413 -1.4260 -0.0077 24 1 -0.3633 -1.0277 -0.0052 25 1 -0.3634 0.5093 0.8926 26 1 -0.3633 0.5183 -0.8874 27 1 1.6085 2.8218 1.0267 28 1 0.0694 3.3757 -0.7140 29 1 4.2369 3.6285 -0.1689 30 1 3.1222 3.1636 -2.2808 31 1 5.9756 -0.2619 -0.0010 32 1 6.9071 -2.2116 -1.6457 33 1 7.6464 -2.0833 -0.0316 34 1 6.4047 -4.6034 -1.2246 35 1 8.1481 -4.2794 -1.0671 36 1 8.6845 -8.4210 1.5099 37 1 7.6805 -8.6160 2.9665 38 1 6.9414 -8.7449 1.3522 39 1 6.1246 -6.1180 3.4441 40 1 7.7369 -6.6059 4.0192 41 1 7.5320 -5.0713 3.1411 42 1 4.9958 -4.8771 0.8205 43 1 5.7351 -4.7485 2.4343 44 1 6.2374 -2.3567 2.0132 45 1 4.4944 -2.6807 1.8565 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17310062_15704122.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:50:53 Heat of formation + Delta-G solvation = -15.103106 kcal Electronic energy + Delta-G solvation = -26016.053682 eV Core-core repulsion = 22354.893899 eV Total energy + Delta-G solvation = -3661.159783 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.145 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.59477 -40.91382 -39.48133 -37.64970 -36.70049 -36.02018 -33.01953 -32.08891 -31.10050 -29.26327 -28.72373 -27.24133 -25.54574 -24.60658 -24.03869 -23.34520 -21.68023 -20.37506 -20.02580 -19.25676 -18.16293 -18.01536 -17.38328 -17.22889 -16.86439 -16.70724 -16.22040 -15.70103 -15.61114 -15.36097 -15.11730 -15.01010 -14.46998 -14.12331 -14.02877 -13.88303 -13.85445 -13.78348 -13.71605 -13.47889 -13.36286 -13.27447 -12.96684 -12.89983 -12.62636 -12.59243 -12.30245 -11.99116 -11.83893 -11.59923 -11.55946 -10.97082 -10.71284 -10.57275 -10.28936 -9.93000 -9.77035 -8.56409 -4.80001 0.09368 0.21575 0.82971 1.41604 1.58688 1.78898 1.90885 1.95378 1.98920 2.39192 3.12320 3.32177 3.36360 3.39948 3.78437 3.85485 3.86306 3.97259 4.00464 4.07069 4.14273 4.16827 4.23197 4.24291 4.29360 4.41581 4.44592 4.46726 4.52801 4.55323 4.58959 4.68186 4.80494 4.83080 4.88795 4.92861 4.93783 4.96376 5.08962 5.14539 5.21082 5.35145 5.42862 5.61882 6.24426 6.27830 6.64911 6.95479 7.12135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.228 4.228 3 C 0.098 3.902 4 C -0.035 4.035 5 O -0.545 6.545 6 Si 0.712 3.288 7 N -0.550 5.550 8 C 0.320 3.680 9 N -0.692 5.692 10 C 0.150 3.850 11 H 0.084 0.916 12 C -0.124 4.124 13 C -0.095 4.095 14 C -0.107 4.107 15 H 0.100 0.900 16 C 0.516 3.484 17 O -0.534 6.534 18 N -0.623 5.623 19 C 0.087 3.913 20 C 0.073 3.927 21 C -0.120 4.120 22 C -0.134 4.134 23 S 0.102 5.898 24 H 0.056 0.944 25 H 0.072 0.928 26 H 0.090 0.910 27 H 0.080 0.920 28 H 0.385 0.615 29 H -0.252 1.252 30 H -0.264 1.264 31 H 0.411 0.589 32 H 0.078 0.922 33 H 0.074 0.926 34 H 0.076 0.924 35 H 0.080 0.920 36 H 0.061 0.939 37 H 0.076 0.924 38 H 0.062 0.938 39 H 0.063 0.937 40 H 0.074 0.926 41 H 0.076 0.924 42 H 0.072 0.928 43 H 0.085 0.915 44 H 0.074 0.926 45 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.061 1.415 5.206 5.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.350 4.350 3 C -0.031 4.031 4 C -0.147 4.147 5 O -0.351 6.351 6 Si 0.612 3.388 7 N -0.277 5.277 8 C -0.052 4.052 9 N -0.332 5.332 10 C 0.045 3.955 11 H 0.101 0.899 12 C -0.162 4.162 13 C -0.133 4.133 14 C -0.129 4.129 15 H 0.118 0.882 16 C 0.304 3.696 17 O -0.410 6.410 18 N -0.357 5.357 19 C -0.055 4.055 20 C -0.070 4.070 21 C -0.158 4.158 22 C -0.173 4.173 23 S 0.350 5.650 24 H 0.075 0.925 25 H 0.091 0.909 26 H 0.108 0.892 27 H 0.097 0.903 28 H 0.233 0.767 29 H -0.177 1.177 30 H -0.189 1.189 31 H 0.249 0.751 32 H 0.097 0.903 33 H 0.093 0.907 34 H 0.094 0.906 35 H 0.099 0.901 36 H 0.080 0.920 37 H 0.095 0.905 38 H 0.081 0.919 39 H 0.081 0.919 40 H 0.092 0.908 41 H 0.094 0.906 42 H 0.091 0.909 43 H 0.103 0.897 44 H 0.093 0.907 45 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 0.216 -0.359 4.160 4.181 hybrid contribution 0.101 0.409 0.523 0.672 sum 0.317 0.051 4.683 4.694 Atomic orbital electron populations 1.20098 0.86237 1.01373 1.03884 1.25184 1.01525 0.92429 1.15900 1.18904 0.86450 0.95106 1.02604 1.23960 0.93025 0.96254 1.01438 1.86429 1.33957 1.35684 1.79017 0.96200 0.78899 0.84618 0.79124 1.65705 1.17205 1.16883 1.27902 1.23222 0.91969 0.91201 0.98760 1.44062 1.01666 1.07000 1.80465 1.21221 0.98709 0.78674 0.96888 0.89852 1.21796 0.95114 0.97231 1.02076 1.21296 1.04017 0.93490 0.94542 1.21389 0.99543 0.92285 0.99639 0.88183 1.20679 0.76377 0.89453 0.83100 1.90727 1.48576 1.70917 1.30769 1.47788 1.71499 1.09460 1.06977 1.21659 1.01792 0.79585 1.02474 1.22059 1.01521 0.98122 0.85297 1.21784 0.95373 0.96160 1.02517 1.22051 1.03222 0.95428 0.96614 1.83965 0.96441 1.10500 1.74067 0.92549 0.90913 0.89202 0.90250 0.76690 1.17725 1.18892 0.75085 0.90291 0.90688 0.90569 0.90146 0.91985 0.90525 0.91946 0.91901 0.90760 0.90567 0.90893 0.89657 0.90692 0.90839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.09 8.92 36.01 0.32 0.23 16 2 C -0.23 -0.84 6.50 -36.02 -0.23 -1.08 16 3 C 0.10 0.45 5.95 -84.18 -0.50 -0.05 16 4 C -0.03 -0.05 2.93 36.00 0.11 0.05 16 5 O -0.54 -0.01 9.79 -35.23 -0.35 -0.35 16 6 Si 0.71 0.97 32.09 -169.99 -5.45 -4.49 16 7 N -0.55 -2.97 8.95 -11.36 -0.10 -3.07 16 8 C 0.32 1.09 8.22 -87.68 -0.72 0.37 16 9 N -0.69 -0.50 5.23 -55.78 -0.29 -0.79 16 10 C 0.15 -0.17 2.40 -67.93 -0.16 -0.34 16 11 H 0.08 -0.03 7.26 -51.93 -0.38 -0.41 16 12 C -0.12 0.24 5.39 -26.74 -0.14 0.10 16 13 C -0.10 0.07 4.49 -26.73 -0.12 -0.05 16 14 C -0.11 0.15 1.72 -91.77 -0.16 -0.01 16 15 H 0.10 -0.28 7.40 -51.93 -0.38 -0.67 16 16 C 0.52 0.85 7.08 -10.98 -0.08 0.77 16 17 O -0.53 -3.11 15.98 5.56 0.09 -3.02 16 18 N -0.62 0.21 3.27 -189.51 -0.62 -0.41 16 19 C 0.09 -0.06 10.16 59.85 0.61 0.55 16 20 C 0.07 -0.27 8.77 59.85 0.52 0.26 16 21 C -0.12 0.30 4.84 -26.73 -0.13 0.17 16 22 C -0.13 0.29 5.51 -26.73 -0.15 0.14 16 23 S 0.10 0.24 21.69 -107.50 -2.33 -2.09 16 24 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 25 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 26 H 0.09 0.17 6.72 -51.93 -0.35 -0.17 16 27 H 0.08 0.00 7.96 -51.93 -0.41 -0.42 16 28 H 0.38 -1.97 8.74 45.56 0.40 -1.57 16 29 H -0.25 -1.22 7.11 56.52 0.40 -0.82 16 30 H -0.26 -1.47 7.11 56.52 0.40 -1.07 16 31 H 0.41 0.04 8.73 -40.82 -0.36 -0.32 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.08 0.04 8.10 -51.93 -0.42 -0.38 16 35 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 36 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.08 -0.24 7.79 -51.93 -0.40 -0.64 16 38 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.06 -0.28 6.95 -51.93 -0.36 -0.64 16 40 H 0.07 -0.34 7.92 -51.93 -0.41 -0.75 16 41 H 0.08 -0.35 6.01 -51.93 -0.31 -0.67 16 42 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.09 -0.31 4.53 -51.93 -0.24 -0.55 16 44 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.07 -0.09 8.04 -51.93 -0.42 -0.51 16 LS Contribution 363.48 15.07 5.48 5.48 Total: 0.00 -10.04 363.48 -11.46 -21.49 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -7.04 Total: -13.86 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -0.84 Total: 1.11 kcal Atomic # 7 Polarization: -3.26 SS G_CDS: -1.01 Total: -4.27 kcal Atomic # 8 Polarization: -3.12 SS G_CDS: -0.26 Total: -3.38 kcal Atomic # 14 Polarization: 0.97 SS G_CDS: -5.45 Total: -4.49 kcal Atomic # 16 Polarization: 0.24 SS G_CDS: -2.33 Total: -2.09 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -10.04 -11.46 -21.49 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17310062_15704122.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.390 kcal (2) G-P(sol) polarization free energy of solvation -10.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds