Wall clock time and date at job start Mon Mar 8 2021 08:50:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46509 * 1 3 3 C 1.46501 * 119.99801 * 2 1 4 4 C 1.34776 * 120.00064 * 179.72141 * 2 1 3 5 5 O 1.21285 * 120.00126 * 5.08563 * 4 2 1 6 6 C 1.50702 * 120.00142 * 185.08399 * 4 2 1 7 7 H 1.09005 * 109.46354 * 331.79186 * 6 4 2 8 8 C 1.52999 * 109.47078 * 91.78819 * 6 4 2 9 9 C 1.52992 * 109.46942 * 180.02562 * 8 6 4 10 10 C 1.53003 * 109.47250 * 299.99872 * 9 8 6 11 11 H 1.08999 * 109.47036 * 300.00447 * 10 9 8 12 12 N 1.46502 * 109.47300 * 180.02562 * 10 9 8 13 13 C 1.39142 * 120.00117 * 85.00151 * 12 10 9 14 14 N 1.32334 * 119.71634 * 0.02562 * 13 12 10 15 15 C 1.32007 * 121.64959 * 179.97438 * 14 13 12 16 16 C 1.37989 * 120.90018 * 0.02562 * 15 14 13 17 17 C 1.50698 * 120.32791 * 179.97438 * 16 15 14 18 18 O 1.42906 * 109.46706 * 120.00172 * 17 16 15 19 19 Si 1.86293 * 109.47122 * 0.02562 * 17 16 15 20 20 C 1.38906 * 119.34068 * 359.97438 * 16 15 14 21 21 C 1.38442 * 118.48819 * 359.75215 * 20 16 15 22 22 F 1.35099 * 120.46847 * 180.27128 * 21 20 16 23 23 C 1.52999 * 109.47044 * 60.00190 * 10 9 8 24 24 C 1.52991 * 109.47047 * 211.79155 * 6 4 2 25 25 H 1.09000 * 109.46713 * 90.00193 * 1 2 3 26 26 H 1.09004 * 109.46656 * 209.99957 * 1 2 3 27 27 H 1.08999 * 109.47241 * 329.99941 * 1 2 3 28 28 H 1.08998 * 109.47000 * 5.15278 * 3 2 1 29 29 H 1.08999 * 109.46908 * 125.14647 * 3 2 1 30 30 H 1.08995 * 109.46713 * 245.15110 * 3 2 1 31 31 H 1.09000 * 109.47438 * 300.00203 * 8 6 4 32 32 H 1.08999 * 109.46994 * 60.00028 * 8 6 4 33 33 H 1.09007 * 109.47438 * 180.02562 * 9 8 6 34 34 H 1.08999 * 109.47466 * 60.00056 * 9 8 6 35 35 H 0.97005 * 120.00067 * 265.00221 * 12 10 9 36 36 H 1.08003 * 119.55525 * 180.02562 * 15 14 13 37 37 H 1.08999 * 109.47039 * 239.99643 * 17 16 15 38 38 H 0.96697 * 113.99802 * 299.99986 * 18 17 16 39 39 H 1.48501 * 110.00214 * 58.67791 * 19 17 16 40 40 H 1.48500 * 110.00081 * 179.97438 * 19 17 16 41 41 H 1.08002 * 120.74969 * 179.97438 * 20 16 15 42 42 H 1.09000 * 109.47438 * 180.02562 * 23 10 9 43 43 H 1.09011 * 109.47041 * 59.99773 * 23 10 9 44 44 H 1.08998 * 109.47671 * 299.99677 * 24 6 4 45 45 H 1.09000 * 109.47841 * 59.99797 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1976 1.2688 0.0000 4 6 2.1390 -1.1672 0.0057 5 8 1.5362 -2.2159 -0.0823 6 6 3.6416 -1.1692 0.1213 7 1 4.0395 -0.2455 -0.2990 8 6 4.0395 -1.2718 1.5951 9 6 5.5649 -1.2732 1.7125 10 6 6.1343 -2.4687 0.9462 11 1 5.7367 -3.3925 1.3664 12 7 7.5950 -2.4704 1.0591 13 6 8.2068 -3.0567 2.1628 14 7 7.4638 -3.6116 3.1069 15 6 8.0039 -4.1786 4.1696 16 6 9.3734 -4.2129 4.3355 17 6 9.9762 -4.8632 5.5540 18 8 10.8267 -5.9378 5.1488 19 14 8.6162 -5.5247 6.6418 20 6 10.1907 -3.6421 3.3682 21 6 9.5966 -3.0596 2.2617 22 9 10.3536 -2.4976 1.2940 23 6 5.7364 -2.3662 -0.5276 24 6 4.2104 -2.3649 -0.6450 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5139 27 1 -0.3634 0.8900 0.5138 28 1 1.4928 2.0951 0.0923 29 1 2.8915 1.2876 0.8403 30 1 2.7532 1.3674 -0.9325 31 1 3.6342 -0.4198 2.1411 32 1 3.6415 -2.1953 2.0155 33 1 5.8485 -1.3467 2.7625 34 1 5.9626 -0.3494 1.2923 35 1 8.1357 -2.0629 0.3645 36 1 7.3654 -4.6218 4.9194 37 1 10.5594 -4.1273 6.1075 38 1 10.3736 -6.6313 4.6499 39 1 7.7948 -6.5057 5.8882 40 1 9.1977 -6.1691 7.8468 41 1 11.2653 -3.6557 3.4752 42 1 6.1417 -3.2181 -1.0736 43 1 6.1341 -1.4423 -0.9479 44 1 3.8125 -3.2886 -0.2247 45 1 3.9269 -2.2920 -1.6949 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17310062_17656566.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:50:56 Heat of formation + Delta-G solvation = -69.651805 kcal Electronic energy + Delta-G solvation = -27848.506991 eV Core-core repulsion = 23781.913196 eV Total energy + Delta-G solvation = -4066.593795 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.164 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -49.85205 -41.58852 -41.19751 -39.32057 -38.01078 -36.54629 -35.97748 -33.27722 -32.32072 -31.87902 -30.39825 -28.91791 -27.25800 -26.37898 -25.12764 -23.84276 -23.49910 -22.70974 -21.29486 -20.08046 -19.29393 -18.53183 -18.32264 -18.01581 -17.62769 -17.21301 -16.96091 -16.69509 -16.40895 -16.18099 -15.96681 -15.53143 -15.44657 -15.14990 -14.92469 -14.56551 -14.33324 -14.27456 -14.05124 -13.87525 -13.74578 -13.68358 -13.46308 -13.36081 -13.25979 -12.97674 -12.72056 -12.53438 -12.36516 -12.21972 -12.02532 -11.79019 -11.41858 -11.11268 -10.78380 -10.63676 -10.58605 -10.50145 -9.71629 -8.75680 -5.00812 -0.05033 0.13934 1.22509 1.55419 1.63673 1.91789 1.93373 2.01948 2.57097 3.04951 3.25917 3.34177 3.43132 3.55637 3.57140 3.59951 3.84762 3.94061 3.97660 4.01665 4.10432 4.13979 4.23161 4.26747 4.32901 4.37949 4.40517 4.44921 4.46834 4.55840 4.60833 4.65278 4.71267 4.74921 4.85808 4.92093 4.96521 4.98709 5.05332 5.10283 5.20968 5.27870 5.41579 5.45308 5.97043 6.18900 6.30406 6.35571 6.97561 7.18690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.083 3.917 2 N -0.625 5.625 3 C 0.078 3.922 4 C 0.517 3.483 5 O -0.535 6.535 6 C -0.107 4.107 7 H 0.092 0.908 8 C -0.102 4.102 9 C -0.125 4.125 10 C 0.155 3.845 11 H 0.095 0.905 12 N -0.714 5.714 13 C 0.393 3.607 14 N -0.511 5.511 15 C 0.148 3.852 16 C -0.209 4.209 17 C -0.061 4.061 18 O -0.530 6.530 19 Si 0.681 3.319 20 C -0.038 4.038 21 C -0.022 4.022 22 F -0.134 7.134 23 C -0.127 4.127 24 C -0.098 4.098 25 H 0.055 0.945 26 H 0.076 0.924 27 H 0.070 0.930 28 H 0.079 0.921 29 H 0.065 0.935 30 H 0.061 0.939 31 H 0.069 0.931 32 H 0.075 0.925 33 H 0.075 0.925 34 H 0.064 0.936 35 H 0.411 0.589 36 H 0.163 0.837 37 H 0.120 0.880 38 H 0.377 0.623 39 H -0.256 1.256 40 H -0.254 1.254 41 H 0.149 0.851 42 H 0.074 0.926 43 H 0.069 0.931 44 H 0.080 0.920 45 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.944 5.413 0.692 5.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 N -0.359 5.359 3 C -0.066 4.066 4 C 0.305 3.695 5 O -0.411 6.411 6 C -0.128 4.128 7 H 0.110 0.890 8 C -0.140 4.140 9 C -0.164 4.164 10 C 0.051 3.949 11 H 0.113 0.887 12 N -0.345 5.345 13 C 0.154 3.846 14 N -0.227 5.227 15 C -0.009 4.009 16 C -0.215 4.215 17 C -0.171 4.171 18 O -0.336 6.336 19 Si 0.582 3.418 20 C -0.064 4.064 21 C -0.048 4.048 22 F -0.113 7.113 23 C -0.165 4.165 24 C -0.136 4.136 25 H 0.074 0.926 26 H 0.095 0.905 27 H 0.089 0.911 28 H 0.098 0.902 29 H 0.084 0.916 30 H 0.080 0.920 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.094 0.906 34 H 0.083 0.917 35 H 0.248 0.752 36 H 0.179 0.821 37 H 0.138 0.862 38 H 0.224 0.776 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.166 0.834 42 H 0.093 0.907 43 H 0.088 0.912 44 H 0.099 0.901 45 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -2.272 4.539 1.171 5.210 hybrid contribution 1.710 -0.224 -1.262 2.137 sum -0.562 4.315 -0.092 4.352 Atomic orbital electron populations 1.21704 0.78977 1.03204 1.02045 1.47819 1.07255 1.06528 1.74319 1.21856 0.97533 0.85209 1.01962 1.20722 0.90095 0.83074 0.75563 1.90714 1.70380 1.31178 1.48816 1.21415 0.91321 1.01416 0.98686 0.88989 1.21397 0.95924 1.03364 0.93351 1.21921 0.94433 0.98360 1.01662 1.21016 0.78453 0.99920 0.95538 0.88720 1.44694 1.07020 1.61591 1.21239 1.18436 0.86485 0.90898 0.88781 1.67323 1.38112 1.14531 1.02762 1.22348 0.92003 0.93260 0.93267 1.20860 0.94333 1.06449 0.99819 1.24819 1.02749 0.91816 0.97766 1.86609 1.37513 1.33665 1.75854 0.95154 0.79413 0.87419 0.79851 1.21273 1.01614 0.92859 0.90653 1.18008 0.87954 1.07589 0.91265 1.91490 1.75391 1.83358 1.61060 1.21838 0.96319 1.02992 0.95369 1.21338 0.93705 0.98107 1.00475 0.92649 0.90539 0.91084 0.90212 0.91601 0.92027 0.91221 0.90599 0.90615 0.91707 0.75191 0.82050 0.86228 0.77570 1.18064 1.17861 0.83356 0.90703 0.91230 0.90092 0.91061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.04 10.39 59.85 0.62 0.58 16 2 N -0.62 -0.03 3.27 -189.51 -0.62 -0.65 16 3 C 0.08 -0.26 9.38 59.85 0.56 0.31 16 4 C 0.52 1.04 6.70 -10.98 -0.07 0.97 16 5 O -0.53 -3.26 15.84 5.55 0.09 -3.17 16 6 C -0.11 0.09 1.86 -91.78 -0.17 -0.08 16 7 H 0.09 -0.24 6.58 -51.93 -0.34 -0.58 16 8 C -0.10 0.13 5.19 -26.74 -0.14 -0.01 16 9 C -0.12 0.18 5.51 -26.73 -0.15 0.04 16 10 C 0.16 -0.14 2.47 -67.93 -0.17 -0.31 16 11 H 0.09 0.07 7.54 -51.93 -0.39 -0.32 16 12 N -0.71 0.26 5.23 -53.85 -0.28 -0.03 16 13 C 0.39 0.49 7.47 -154.86 -1.16 -0.66 16 14 N -0.51 -0.69 9.20 -12.37 -0.11 -0.81 16 15 C 0.15 -0.02 9.84 -17.57 -0.17 -0.20 16 16 C -0.21 0.08 5.40 -104.47 -0.56 -0.48 16 17 C -0.06 0.07 2.84 36.00 0.10 0.17 16 18 O -0.53 -0.26 12.78 -35.23 -0.45 -0.71 16 19 Si 0.68 -1.22 29.82 -169.99 -5.07 -6.29 16 20 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 21 C -0.02 -0.03 7.35 -39.10 -0.29 -0.32 16 22 F -0.13 -0.27 16.65 2.25 0.04 -0.23 16 23 C -0.13 0.23 5.39 -26.70 -0.14 0.09 16 24 C -0.10 0.05 4.83 -26.71 -0.13 -0.08 16 25 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.08 0.09 7.49 -51.93 -0.39 -0.30 16 27 H 0.07 -0.19 7.88 -51.93 -0.41 -0.60 16 28 H 0.08 -0.35 7.77 -51.93 -0.40 -0.76 16 29 H 0.07 -0.27 7.27 -51.93 -0.38 -0.65 16 30 H 0.06 -0.24 7.83 -51.93 -0.41 -0.65 16 31 H 0.07 -0.13 7.66 -51.93 -0.40 -0.53 16 32 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.41 -0.58 8.08 -40.82 -0.33 -0.91 16 36 H 0.16 -0.36 4.88 -52.48 -0.26 -0.62 16 37 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 38 H 0.38 -0.82 8.70 45.56 0.40 -0.42 16 39 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 40 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 41 H 0.15 -0.03 8.06 -52.49 -0.42 -0.46 16 42 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.07 -0.19 8.14 -51.92 -0.42 -0.62 16 44 H 0.08 0.10 7.85 -51.93 -0.41 -0.30 16 45 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 363.87 15.07 5.48 5.48 Total: 0.00 -7.75 363.87 -9.88 -17.63 By element: Atomic # 1 Polarization: -4.13 SS G_CDS: -6.71 Total: -10.83 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -2.25 Total: -0.39 kcal Atomic # 7 Polarization: -0.47 SS G_CDS: -1.02 Total: -1.48 kcal Atomic # 8 Polarization: -3.52 SS G_CDS: -0.36 Total: -3.88 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.04 Total: -0.23 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.07 Total: -6.29 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -7.75 -9.88 -17.63 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17310062_17656566.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.025 kcal (2) G-P(sol) polarization free energy of solvation -7.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.627 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.652 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds