Wall clock time and date at job start Mon Mar 8 2021 08:51:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53001 * 109.47411 * 2 1 4 4 C 1.53003 * 109.47227 * 240.00051 * 2 1 3 5 5 O 1.45202 * 109.47441 * 119.99868 * 2 1 3 6 6 C 1.34641 * 116.99668 * 59.99887 * 5 2 1 7 7 O 1.21518 * 120.00066 * 0.02562 * 6 5 2 8 8 N 1.34770 * 119.99989 * 180.02562 * 6 5 2 9 9 C 1.46501 * 119.99996 * 180.02562 * 8 6 5 10 10 C 1.53004 * 109.47320 * 179.97438 * 9 8 6 11 11 C 1.53920 * 113.58806 * 184.99550 * 10 9 8 12 12 C 1.53067 * 86.84091 * 220.46871 * 11 10 9 13 13 C 1.52780 * 120.92300 * 259.74716 * 12 11 10 14 14 C 1.53648 * 83.31985 * 208.46742 * 13 12 11 15 15 N 1.46684 * 120.99411 * 150.36498 * 12 11 10 16 16 C 1.38405 * 110.99920 * 264.01830 * 15 12 11 17 17 N 1.32494 * 119.21949 * 113.73593 * 16 15 12 18 18 C 1.32279 * 120.74501 * 179.97438 * 17 16 15 19 19 C 1.38607 * 119.19099 * 0.02562 * 18 17 16 20 20 C 1.50707 * 120.71745 * 179.97438 * 19 18 17 21 21 O 1.42896 * 109.46879 * 300.00322 * 20 19 18 22 22 Si 1.86295 * 109.47138 * 179.97438 * 20 19 18 23 23 C 1.38602 * 118.56244 * 0.26856 * 19 18 17 24 24 N 1.32277 * 119.19341 * 359.45249 * 23 19 18 25 25 C 1.53063 * 87.86472 * 25.00019 * 12 11 10 26 26 H 1.08998 * 109.46922 * 299.99719 * 1 2 3 27 27 H 1.08996 * 109.46767 * 59.99877 * 1 2 3 28 28 H 1.09002 * 109.46948 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47723 * 179.97438 * 3 2 1 30 30 H 1.09001 * 109.47219 * 300.00310 * 3 2 1 31 31 H 1.09004 * 109.46805 * 59.99761 * 3 2 1 32 32 H 1.09002 * 109.47149 * 299.99868 * 4 2 1 33 33 H 1.09001 * 109.46810 * 60.00053 * 4 2 1 34 34 H 1.09006 * 109.46979 * 180.02562 * 4 2 1 35 35 H 0.96995 * 120.00054 * 359.97438 * 8 6 5 36 36 H 1.08999 * 109.47550 * 59.99924 * 9 8 6 37 37 H 1.09003 * 109.47411 * 299.99739 * 9 8 6 38 38 H 1.08997 * 112.82494 * 316.11250 * 10 9 8 39 39 H 1.09005 * 113.64620 * 105.98118 * 11 10 9 40 40 H 1.08997 * 113.65466 * 334.95731 * 11 10 9 41 41 H 1.09001 * 114.21655 * 322.05085 * 13 12 11 42 42 H 1.09005 * 114.21083 * 94.68940 * 13 12 11 43 43 H 1.08996 * 113.44174 * 270.52195 * 14 13 12 44 44 H 1.09007 * 113.44152 * 140.16849 * 14 13 12 45 45 H 1.07995 * 120.40021 * 179.97438 * 18 17 16 46 46 H 1.09004 * 109.46436 * 59.99858 * 20 19 18 47 47 H 0.96704 * 113.99850 * 180.02562 * 21 20 19 48 48 H 1.48503 * 109.99867 * 60.00003 * 22 20 19 49 49 H 1.48502 * 109.99729 * 181.32009 * 22 20 19 50 50 H 1.07992 * 120.40190 * 179.72607 * 23 19 18 51 51 H 1.08995 * 113.65030 * 89.48614 * 25 12 11 52 52 H 1.08997 * 113.65431 * 220.52014 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0141 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5097 0.5035 8 7 2.0672 -2.6654 2.4171 9 6 1.6741 -4.0669 2.5830 10 6 2.2741 -4.6149 3.8794 11 6 2.0211 -6.1188 4.0877 12 6 1.7723 -5.7866 5.5610 13 6 2.8570 -6.0176 6.6119 14 6 1.6554 -6.2038 7.5513 15 7 0.8559 -6.5942 6.3732 16 6 -0.4035 -6.0220 6.4168 17 7 -1.4202 -6.6519 5.8467 18 6 -2.6367 -6.1328 5.8708 19 6 -2.8398 -4.9155 6.5016 20 6 -4.2112 -4.2924 6.5491 21 8 -4.6762 -4.0625 5.2177 22 14 -4.1262 -2.6731 7.4663 23 6 -1.7532 -4.2806 7.0824 24 7 -0.5639 -4.8571 7.0273 25 6 1.3944 -4.3708 5.1187 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6767 -1.7489 -1.2493 33 1 1.6767 -0.2074 -2.1392 34 1 3.1301 -0.7216 -1.2490 35 1 2.6268 -2.2366 3.0832 36 1 2.0412 -4.6498 1.7384 37 1 0.5872 -4.1365 2.6275 38 1 3.3152 -4.3242 4.0195 39 1 2.9029 -6.7376 3.9218 40 1 1.1378 -6.4898 3.5679 41 1 3.4461 -6.9212 6.4552 42 1 3.4650 -5.1389 6.8275 43 1 1.3198 -5.2763 8.0151 44 1 1.7891 -7.0111 8.2715 45 1 -3.4613 -6.6509 5.4040 46 1 -4.8981 -4.9650 7.0629 47 1 -5.5551 -3.6617 5.1717 48 1 -3.1925 -1.7471 6.7764 49 1 -5.4781 -2.0640 7.5478 50 1 -1.8768 -3.3290 7.5778 51 1 0.3358 -4.2530 4.8873 52 1 1.7746 -3.5905 5.7780 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17310064_12175864.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:51:00 Heat of formation + Delta-G solvation = 30.338075 kcal Electronic energy + Delta-G solvation = -33993.558225 eV Core-core repulsion = 29577.344811 eV Total energy + Delta-G solvation = -4416.213414 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.199 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.27404 -41.67338 -41.34517 -38.77030 -38.16803 -37.40682 -35.41754 -34.87898 -34.58730 -33.74812 -30.26125 -28.80047 -28.30401 -28.26090 -27.07449 -26.38107 -25.86360 -24.61381 -23.26892 -22.99845 -21.92399 -20.84046 -19.91896 -19.15976 -19.01548 -18.65384 -18.24687 -17.62115 -17.19025 -17.05023 -16.83129 -16.57239 -16.31520 -16.03157 -15.75189 -15.55885 -15.39552 -15.05957 -14.79284 -14.75446 -14.52244 -14.27664 -14.11497 -13.66380 -13.51337 -13.40491 -13.21223 -13.05862 -13.01746 -12.82939 -12.79726 -12.73186 -12.55800 -12.33088 -12.30554 -12.24286 -12.09758 -11.93257 -11.82888 -11.60727 -11.29852 -11.24840 -11.02992 -10.91905 -10.54178 -10.37965 -10.14193 -9.78386 -5.18106 -0.39367 -0.01894 1.02922 1.24493 1.39532 1.76173 1.95802 2.19256 2.43650 2.88527 3.04902 3.11887 3.22737 3.34714 3.37460 3.43527 3.46782 3.61224 3.63033 3.80816 3.85099 3.85883 3.89686 3.99960 4.12381 4.15643 4.25220 4.31419 4.50140 4.55853 4.58377 4.61321 4.62369 4.65218 4.66392 4.69889 4.76330 4.78355 4.80217 4.84517 4.87442 4.91794 4.95763 4.97926 5.07787 5.10276 5.18745 5.22156 5.32916 5.39398 5.49423 5.64283 5.68477 6.06386 6.22544 6.46759 7.01240 7.48083 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.648 3.352 7 O -0.567 6.567 8 N -0.710 5.710 9 C 0.151 3.849 10 C -0.122 4.122 11 C -0.105 4.105 12 C 0.052 3.948 13 C -0.116 4.116 14 C 0.009 3.991 15 N -0.407 5.407 16 C 0.464 3.536 17 N -0.492 5.492 18 C 0.188 3.812 19 C -0.189 4.189 20 C -0.064 4.064 21 O -0.535 6.535 22 Si 0.676 3.324 23 C 0.167 3.833 24 N -0.532 5.532 25 C -0.121 4.121 26 H 0.059 0.941 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.066 0.934 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.406 0.594 36 H 0.076 0.924 37 H 0.068 0.932 38 H 0.106 0.894 39 H 0.086 0.914 40 H 0.092 0.908 41 H 0.102 0.898 42 H 0.088 0.912 43 H 0.102 0.898 44 H 0.092 0.908 45 H 0.174 0.826 46 H 0.085 0.915 47 H 0.385 0.615 48 H -0.251 1.251 49 H -0.253 1.253 50 H 0.169 0.831 51 H 0.079 0.921 52 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.336 2.520 4.818 5.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.456 6.456 8 N -0.370 5.370 9 C 0.028 3.972 10 C -0.142 4.142 11 C -0.144 4.144 12 C -0.037 4.037 13 C -0.154 4.154 14 C -0.119 4.119 15 N -0.129 5.129 16 C 0.109 3.891 17 N -0.206 5.206 18 C 0.021 3.979 19 C -0.194 4.194 20 C -0.175 4.175 21 O -0.343 6.343 22 Si 0.576 3.424 23 C 0.000 4.000 24 N -0.249 5.249 25 C -0.160 4.160 26 H 0.078 0.922 27 H 0.091 0.909 28 H 0.105 0.895 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.241 0.759 36 H 0.094 0.906 37 H 0.087 0.913 38 H 0.124 0.876 39 H 0.104 0.896 40 H 0.110 0.890 41 H 0.121 0.879 42 H 0.107 0.893 43 H 0.120 0.880 44 H 0.110 0.890 45 H 0.191 0.809 46 H 0.103 0.897 47 H 0.234 0.766 48 H -0.175 1.175 49 H -0.177 1.177 50 H 0.186 0.814 51 H 0.098 0.902 52 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.170 1.763 3.974 4.502 hybrid contribution -1.762 1.291 -0.441 2.228 sum -0.592 3.054 3.533 4.707 Atomic orbital electron populations 1.22522 0.93954 1.05032 1.02641 1.22104 0.94375 0.91561 0.81931 1.21877 1.02339 0.92367 1.03295 1.22525 1.01615 1.03476 0.96521 1.86301 1.71526 1.23488 1.46709 1.18114 0.78879 0.80628 0.82217 1.90925 1.40934 1.70480 1.43215 1.44710 1.55863 1.12684 1.23741 1.21319 0.99763 0.78761 0.97353 1.22733 1.00499 0.97386 0.93547 1.22857 1.03194 0.94597 0.93708 1.23528 0.92522 0.93284 0.94400 1.22952 0.95402 1.03531 0.93488 1.23905 0.91807 1.02743 0.93441 1.66408 0.95874 1.41838 1.08788 1.21845 0.93032 0.85367 0.88813 1.68219 0.99343 1.34361 1.18641 1.23169 0.93938 0.90785 0.90019 1.21026 0.96478 0.98450 1.03440 1.24544 0.93761 1.09597 0.89605 1.86578 1.38907 1.84081 1.24697 0.95276 0.82858 0.76142 0.88085 1.22896 0.86660 0.97913 0.92549 1.68476 1.25538 1.11025 1.19842 1.23236 1.00004 0.95868 0.96903 0.92207 0.90926 0.89470 0.91363 0.89942 0.91445 0.89427 0.90941 0.92084 0.75915 0.90601 0.91343 0.87582 0.89578 0.88980 0.87916 0.89310 0.87993 0.88957 0.80851 0.89710 0.76608 1.17495 1.17712 0.81396 0.90206 0.89900 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.44 8.37 37.16 0.31 -0.13 16 2 C 0.14 0.30 1.13 -90.62 -0.10 0.20 16 3 C -0.14 0.00 8.85 37.16 0.33 0.33 16 4 C -0.18 -0.40 8.37 37.16 0.31 -0.09 16 5 O -0.37 -1.25 9.94 -40.33 -0.40 -1.65 16 6 C 0.65 2.64 8.06 54.05 0.44 3.07 16 7 O -0.57 -3.74 11.88 -19.29 -0.23 -3.97 16 8 N -0.71 -0.79 5.56 -65.27 -0.36 -1.15 16 9 C 0.15 0.10 5.51 -4.04 -0.02 0.08 16 10 C -0.12 0.16 3.75 -89.66 -0.34 -0.17 16 11 C -0.11 0.03 7.52 -26.22 -0.20 -0.17 16 12 C 0.05 0.00 1.14 -137.47 -0.16 -0.15 16 13 C -0.12 0.19 8.21 -26.51 -0.22 -0.03 16 14 C 0.01 0.00 7.57 -8.79 -0.07 -0.07 16 15 N -0.41 -0.94 6.53 -173.25 -1.13 -2.07 16 16 C 0.46 1.48 5.80 -322.81 -1.87 -0.40 16 17 N -0.49 -1.98 10.47 -13.93 -0.15 -2.12 16 18 C 0.19 0.34 10.92 -17.22 -0.19 0.15 16 19 C -0.19 -0.08 5.43 -104.35 -0.57 -0.65 16 20 C -0.06 0.11 2.84 36.01 0.10 0.21 16 21 O -0.53 0.15 12.76 -35.23 -0.45 -0.30 16 22 Si 0.68 -1.60 29.87 -169.99 -5.08 -6.67 16 23 C 0.17 0.06 9.92 -17.23 -0.17 -0.11 16 24 N -0.53 -0.97 6.80 -13.93 -0.09 -1.06 16 25 C -0.12 0.01 5.78 -26.22 -0.15 -0.14 16 26 H 0.06 0.13 8.14 -51.93 -0.42 -0.29 16 27 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 28 H 0.09 0.41 5.88 -51.93 -0.31 0.11 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 31 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.09 0.39 5.88 -51.93 -0.31 0.08 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 34 H 0.06 0.11 8.14 -51.93 -0.42 -0.32 16 35 H 0.41 -0.44 8.58 -40.82 -0.35 -0.79 16 36 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 37 H 0.07 0.17 7.85 -51.93 -0.41 -0.23 16 38 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 39 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.09 0.12 8.10 -51.93 -0.42 -0.30 16 41 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.10 0.01 6.61 -51.93 -0.34 -0.33 16 44 H 0.09 -0.04 8.14 -51.92 -0.42 -0.47 16 45 H 0.17 -0.02 8.06 -52.49 -0.42 -0.45 16 46 H 0.09 -0.31 7.96 -51.93 -0.41 -0.72 16 47 H 0.39 -1.61 8.74 45.56 0.40 -1.21 16 48 H -0.25 -0.21 7.11 56.52 0.40 0.20 16 49 H -0.25 0.08 7.11 56.52 0.40 0.48 16 50 H 0.17 -0.37 5.04 -52.49 -0.26 -0.63 16 51 H 0.08 0.19 6.55 -51.93 -0.34 -0.15 16 52 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 LS Contribution 410.46 15.07 6.19 6.19 Total: 0.00 -8.87 410.46 -12.56 -21.43 By element: Atomic # 1 Polarization: -2.28 SS G_CDS: -8.29 Total: -10.57 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: -2.56 Total: 1.96 kcal Atomic # 7 Polarization: -4.67 SS G_CDS: -1.73 Total: -6.41 kcal Atomic # 8 Polarization: -4.84 SS G_CDS: -1.08 Total: -5.92 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.08 Total: -6.67 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -8.87 -12.56 -21.43 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17310064_12175864.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.766 kcal (2) G-P(sol) polarization free energy of solvation -8.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.559 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.427 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds