Wall clock time and date at job start Mon Mar 8 2021 09:02:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42898 * 114.00162 * 2 1 4 4 C 1.53011 * 112.90767 * 65.96044 * 3 2 1 5 5 F 1.39905 * 109.46864 * 283.54347 * 4 3 2 6 6 F 1.39901 * 109.46968 * 43.54186 * 4 3 2 7 7 F 1.39899 * 109.46958 * 163.54258 * 4 3 2 8 8 C 1.53777 * 113.61874 * 294.71165 * 3 2 1 9 9 C 1.53790 * 87.07905 * 270.88169 * 8 3 2 10 10 H 1.08996 * 113.61179 * 219.93057 * 9 8 3 11 11 N 1.46500 * 113.61161 * 89.11422 * 9 8 3 12 12 C 1.38402 * 119.99903 * 155.00448 * 11 9 8 13 13 N 1.32492 * 119.21864 * 179.97438 * 12 11 9 14 14 C 1.32278 * 120.74185 * 179.97438 * 13 12 11 15 15 C 1.38605 * 119.19771 * 0.02562 * 14 13 12 16 16 C 1.50697 * 120.72019 * 180.02562 * 15 14 13 17 17 O 1.42903 * 109.47158 * 299.99137 * 16 15 14 18 18 Si 1.86305 * 109.46815 * 179.97438 * 16 15 14 19 19 C 1.38607 * 118.55908 * 0.26549 * 15 14 13 20 20 N 1.32279 * 119.19294 * 359.45458 * 19 15 14 21 21 C 1.53775 * 113.61632 * 197.20870 * 3 2 1 22 22 H 1.08999 * 109.46706 * 297.11958 * 1 2 3 23 23 H 1.08996 * 109.47090 * 57.11563 * 1 2 3 24 24 H 1.08992 * 109.47289 * 177.12155 * 1 2 3 25 25 H 1.08997 * 113.62038 * 156.33294 * 8 3 2 26 26 H 1.09007 * 113.69137 * 25.43881 * 8 3 2 27 27 H 0.97001 * 120.00170 * 334.99968 * 11 9 8 28 28 H 1.08001 * 120.40288 * 179.97438 * 14 13 12 29 29 H 1.09002 * 109.47612 * 59.99777 * 16 15 14 30 30 H 0.96699 * 114.00015 * 300.00638 * 17 16 15 31 31 H 1.48504 * 109.99774 * 58.68297 * 18 16 15 32 32 H 1.48507 * 109.99792 * 179.97438 * 18 16 15 33 33 H 1.07995 * 120.40379 * 179.72929 * 19 15 14 34 34 H 1.08996 * 113.61626 * 334.56995 * 21 3 2 35 35 H 1.09001 * 113.61922 * 203.66781 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7280 2.0831 1.2872 5 9 0.4117 2.5564 1.2669 6 9 1.9034 1.2396 2.3895 7 9 2.6110 3.1641 1.3820 8 6 1.7228 2.1078 -1.2799 9 6 2.9995 1.4813 -1.8653 10 1 3.5961 2.1768 -2.4554 11 7 2.7670 0.2076 -2.5508 12 6 3.6392 -0.2161 -3.5383 13 7 3.4144 -1.3708 -4.1478 14 6 4.2282 -1.8044 -5.0962 15 6 5.3261 -1.0353 -5.4489 16 6 6.2751 -1.4961 -6.5250 17 8 6.8501 -2.7490 -6.1485 18 14 7.6267 -0.2327 -6.7435 19 6 5.5349 0.1644 -4.7869 20 7 4.6794 0.5425 -3.8515 21 6 3.4904 1.3207 -0.4168 22 1 -0.3633 0.4685 0.9147 23 1 -0.3633 0.5579 -0.8630 24 1 -0.3633 -1.0263 -0.0516 25 1 1.7893 3.1871 -1.1429 26 1 0.8112 1.8017 -1.7933 27 1 2.0018 -0.3388 -2.3125 28 1 4.0400 -2.7468 -5.5892 29 1 5.7321 -1.6127 -7.4629 30 1 7.3494 -2.7198 -5.3209 31 1 8.3544 -0.0408 -5.4632 32 1 8.5698 -0.6757 -7.8017 33 1 6.3832 0.7850 -5.0348 34 1 4.0057 0.3782 -0.2325 35 1 4.0402 2.1848 -0.0439 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17312454_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:02:02 Heat of formation + Delta-G solvation = -122.557778 kcal Electronic energy + Delta-G solvation = -25919.190862 eV Core-core repulsion = 21506.233938 eV Total energy + Delta-G solvation = -4412.956924 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.098 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -51.19164 -48.73860 -48.62466 -42.23447 -41.36240 -38.32202 -37.57163 -35.29871 -34.70000 -32.14936 -29.11208 -28.21209 -26.97336 -26.60165 -25.91436 -24.00817 -23.15688 -21.18456 -20.06191 -19.49707 -19.42942 -19.15633 -18.54388 -18.13266 -17.34272 -16.71204 -16.57621 -16.27427 -16.03405 -15.92074 -15.77584 -15.71034 -15.54095 -15.50762 -15.10912 -14.85561 -14.81259 -14.64336 -14.30988 -14.02970 -14.01753 -13.55544 -13.39801 -13.15368 -12.85153 -12.44623 -12.25489 -11.88793 -11.86730 -11.75882 -11.47848 -10.99517 -10.75142 -10.05102 -9.18974 -5.05257 0.02733 0.13399 1.19701 1.50540 1.51984 1.61880 1.90100 2.00055 2.49224 2.58336 2.76110 2.77242 3.08601 3.25791 3.30518 3.36496 3.46654 3.59179 3.67450 3.70926 3.96215 4.07185 4.14934 4.17672 4.26833 4.30380 4.43559 4.49816 4.55897 4.58089 4.67018 4.75272 5.19345 5.55437 5.73256 5.96951 6.32015 6.36441 7.25465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.332 6.332 3 C 0.040 3.960 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.174 7.174 8 C -0.163 4.163 9 C 0.152 3.848 10 H 0.126 0.874 11 N -0.674 5.674 12 C 0.571 3.429 13 N -0.567 5.567 14 C 0.224 3.776 15 C -0.291 4.291 16 C -0.053 4.053 17 O -0.530 6.530 18 Si 0.678 3.322 19 C 0.200 3.800 20 N -0.562 5.562 21 C -0.133 4.133 22 H 0.054 0.946 23 H 0.055 0.945 24 H 0.103 0.897 25 H 0.121 0.879 26 H 0.098 0.902 27 H 0.419 0.581 28 H 0.171 0.829 29 H 0.121 0.879 30 H 0.376 0.624 31 H -0.257 1.257 32 H -0.253 1.253 33 H 0.168 0.832 34 H 0.098 0.902 35 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.609 2.561 -2.666 3.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.250 6.250 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.155 7.155 8 C -0.201 4.201 9 C 0.045 3.955 10 H 0.144 0.856 11 N -0.310 5.310 12 C 0.214 3.786 13 N -0.288 5.288 14 C 0.056 3.944 15 C -0.299 4.299 16 C -0.164 4.164 17 O -0.336 6.336 18 Si 0.579 3.421 19 C 0.032 3.968 20 N -0.284 5.284 21 C -0.172 4.172 22 H 0.072 0.928 23 H 0.074 0.926 24 H 0.122 0.878 25 H 0.139 0.861 26 H 0.116 0.884 27 H 0.259 0.741 28 H 0.188 0.812 29 H 0.138 0.862 30 H 0.224 0.776 31 H -0.182 1.182 32 H -0.178 1.178 33 H 0.184 0.816 34 H 0.116 0.884 35 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -0.574 2.852 -2.321 3.722 hybrid contribution 0.082 -1.115 0.740 1.341 sum -0.492 1.737 -1.581 2.400 Atomic orbital electron populations 1.23169 0.79399 1.04499 1.01603 1.88108 1.21147 1.21869 1.93874 1.24039 0.99992 0.86300 0.89965 1.21143 0.74321 0.78725 0.87505 1.93196 1.36947 1.89318 1.96823 1.93223 1.94953 1.70703 1.56648 1.93182 1.68782 1.57009 1.96572 1.24041 1.00525 1.01709 0.93834 1.21561 0.96135 0.85497 0.92273 0.85615 1.43793 1.28223 1.22412 1.36619 1.19318 0.86594 0.85598 0.87070 1.67978 1.33049 1.15116 1.12641 1.22854 0.86364 0.97211 0.88005 1.21673 1.02616 1.00044 1.05583 1.24680 1.00907 0.93072 0.97779 1.86612 1.71209 1.30254 1.45509 0.95277 0.79782 0.85186 0.81894 1.22800 0.94726 0.92043 0.87232 1.67908 1.05648 1.35082 1.19736 1.23776 0.91105 1.05986 0.96321 0.92751 0.92606 0.87837 0.86117 0.88364 0.74141 0.81182 0.86167 0.77615 1.18202 1.17765 0.81570 0.88368 0.85826 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.34 101.05 1.05 1.03 16 2 O -0.33 0.00 9.05 -35.23 -0.32 -0.31 16 3 C 0.04 -0.03 0.85 -89.81 -0.08 -0.11 16 4 C 0.44 0.31 2.51 37.16 0.09 0.40 16 5 F -0.18 -0.18 15.38 2.25 0.03 -0.14 16 6 F -0.17 -0.47 17.10 2.25 0.04 -0.43 16 7 F -0.17 -0.11 15.82 2.25 0.04 -0.08 16 8 C -0.16 0.45 6.66 -25.92 -0.17 0.27 16 9 C 0.15 -0.25 4.33 -67.11 -0.29 -0.54 16 10 H 0.13 -0.22 7.37 -51.93 -0.38 -0.61 16 11 N -0.67 0.00 5.30 -55.00 -0.29 -0.29 16 12 C 0.57 1.02 8.43 -322.81 -2.72 -1.70 16 13 N -0.57 -1.27 10.46 -13.93 -0.15 -1.42 16 14 C 0.22 0.11 10.92 -17.22 -0.19 -0.08 16 15 C -0.29 0.22 5.40 -104.35 -0.56 -0.34 16 16 C -0.05 0.09 2.85 36.00 0.10 0.20 16 17 O -0.53 0.09 12.79 -35.23 -0.45 -0.36 16 18 Si 0.68 -1.58 29.87 -169.99 -5.08 -6.66 16 19 C 0.20 -0.10 9.92 -17.22 -0.17 -0.27 16 20 N -0.56 -0.68 9.13 -13.93 -0.13 -0.81 16 21 C -0.13 0.19 7.13 -25.92 -0.18 0.00 16 22 H 0.05 -0.06 6.59 -51.93 -0.34 -0.40 16 23 H 0.06 -0.17 6.61 -51.93 -0.34 -0.52 16 24 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 25 H 0.12 -0.47 8.06 -51.93 -0.42 -0.89 16 26 H 0.10 -0.32 6.69 -51.93 -0.35 -0.66 16 27 H 0.42 -0.06 7.71 -40.82 -0.31 -0.38 16 28 H 0.17 -0.20 8.06 -52.49 -0.42 -0.62 16 29 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 30 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 31 H -0.26 0.10 7.11 56.52 0.40 0.50 16 32 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 33 H 0.17 -0.49 5.04 -52.49 -0.26 -0.76 16 34 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.12 -0.32 7.01 -51.93 -0.36 -0.69 16 LS Contribution 304.51 15.07 4.59 4.59 Total: 0.00 -6.38 304.51 -8.10 -14.48 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -3.26 Total: -7.42 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -3.13 Total: -1.15 kcal Atomic # 7 Polarization: -1.95 SS G_CDS: -0.56 Total: -2.52 kcal Atomic # 8 Polarization: 0.09 SS G_CDS: -0.77 Total: -0.68 kcal Atomic # 9 Polarization: -0.76 SS G_CDS: 0.11 Total: -0.65 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.08 Total: -6.66 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -6.38 -8.10 -14.48 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17312454_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.081 kcal (2) G-P(sol) polarization free energy of solvation -6.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.459 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.099 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.477 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds