Wall clock time and date at job start Mon Mar 8 2021 09:02:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42899 * 114.00165 * 2 1 4 4 C 1.52997 * 112.90446 * 293.95357 * 3 2 1 5 5 F 1.39903 * 109.47607 * 195.89627 * 4 3 2 6 6 F 1.39907 * 109.47149 * 315.89480 * 4 3 2 7 7 F 1.39899 * 109.47689 * 75.89274 * 4 3 2 8 8 C 1.54045 * 113.61458 * 162.69514 * 3 2 1 9 9 C 1.53775 * 86.98786 * 270.87863 * 8 3 2 10 10 H 1.09002 * 113.61792 * 219.98111 * 9 8 3 11 11 N 1.46505 * 113.61444 * 89.15980 * 9 8 3 12 12 C 1.38999 * 119.99961 * 105.86113 * 11 9 8 13 13 N 1.32397 * 119.70757 * 180.02562 * 12 11 9 14 14 C 1.31968 * 121.62531 * 180.02562 * 13 12 11 15 15 C 1.38030 * 120.85836 * 359.97438 * 14 13 12 16 16 C 1.50689 * 120.33829 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.46969 * 245.00244 * 16 15 14 18 18 Si 1.86308 * 109.47230 * 5.00095 * 16 15 14 19 19 C 1.38888 * 119.32407 * 0.27846 * 15 14 13 20 20 C 1.38302 * 118.50622 * 359.45770 * 19 15 14 21 21 C 1.53777 * 87.17427 * 334.57312 * 9 8 3 22 22 H 1.09003 * 109.47489 * 184.84596 * 1 2 3 23 23 H 1.09007 * 109.47549 * 304.84669 * 1 2 3 24 24 H 1.09006 * 109.47018 * 64.84502 * 1 2 3 25 25 H 1.09006 * 113.61491 * 156.37834 * 8 3 2 26 26 H 1.08994 * 113.69738 * 25.39973 * 8 3 2 27 27 H 0.97000 * 120.00042 * 285.86806 * 11 9 8 28 28 H 1.08004 * 119.57619 * 180.02562 * 14 13 12 29 29 H 1.09000 * 109.47559 * 124.99897 * 16 15 14 30 30 H 0.96695 * 114.00193 * 60.00220 * 17 16 15 31 31 H 1.48500 * 109.99926 * 180.02562 * 18 16 15 32 32 H 1.48505 * 109.99621 * 301.31717 * 18 16 15 33 33 H 1.07993 * 120.74408 * 179.70072 * 19 15 14 34 34 H 1.07998 * 120.44700 * 180.28239 * 20 19 15 35 35 H 1.08997 * 113.62157 * 140.01816 * 21 9 8 36 36 H 1.09003 * 113.61539 * 270.92613 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7297 2.0821 -1.2880 5 9 2.6042 3.1706 -1.3761 6 9 1.9190 1.2415 -2.3902 7 9 0.4094 2.5446 -1.2756 8 6 3.4923 1.3210 0.4198 9 6 2.9967 1.4826 1.8666 10 1 3.5926 2.1785 2.4571 11 7 2.7633 0.2093 2.5526 12 6 3.6553 -0.2307 3.5236 13 7 3.4390 -1.3825 4.1396 14 6 4.2606 -1.8361 5.0674 15 6 5.3833 -1.1198 5.4303 16 6 6.3139 -1.6490 6.4908 17 8 6.2915 -0.7768 7.6225 18 14 5.7619 -3.3516 7.0080 19 6 5.6437 0.0962 4.8118 20 6 4.7678 0.5430 3.8393 21 6 1.7209 2.1086 1.2791 22 1 -0.3634 -1.0240 0.0868 23 1 -0.3634 0.5872 0.8434 24 1 -0.3633 0.4369 -0.9303 25 1 4.0425 2.1853 0.0477 26 1 4.0090 0.3787 0.2379 27 1 1.9863 -0.3267 2.3292 28 1 4.0523 -2.7803 5.5484 29 1 7.3271 -1.7011 6.0921 30 1 5.4194 -0.6827 8.0294 31 1 6.6713 -3.8844 8.0541 32 1 4.3704 -3.2994 7.5239 33 1 6.5128 0.6778 5.0814 34 1 4.9425 1.4819 3.3350 35 1 0.8085 1.8018 1.7903 36 1 1.7876 3.1879 1.1414 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17312454_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:02:05 Heat of formation + Delta-G solvation = -138.860371 kcal Electronic energy + Delta-G solvation = -25755.113861 eV Core-core repulsion = 21406.875915 eV Total energy + Delta-G solvation = -4348.237947 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.103 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -51.21961 -48.76989 -48.64973 -41.90245 -41.00936 -38.21113 -37.49850 -35.12078 -33.39156 -31.32631 -29.07101 -28.23647 -27.00972 -26.34984 -24.98594 -23.94863 -22.63535 -21.05048 -19.93777 -19.51635 -19.39985 -18.61873 -18.52374 -17.61203 -17.28375 -16.63914 -16.52406 -16.26647 -16.03066 -15.84355 -15.58938 -15.56054 -15.46497 -15.26306 -15.10572 -14.85857 -14.83233 -14.37152 -14.28834 -14.05622 -13.95138 -13.60491 -13.43341 -13.22772 -12.87384 -12.55532 -12.34619 -11.96022 -11.87036 -11.35782 -11.01331 -10.76748 -10.54045 -10.36988 -8.78939 -4.95187 0.21417 0.40199 1.30039 1.48729 1.59039 1.77521 1.97188 2.03241 2.46204 2.55112 2.71458 2.78854 3.19622 3.29355 3.40029 3.43009 3.55346 3.75245 3.84773 3.90764 4.00318 4.05359 4.12010 4.18148 4.25729 4.29001 4.37886 4.46687 4.55412 4.56033 4.62837 4.72539 4.98738 5.27688 5.45215 5.56409 5.93377 6.41465 6.48515 7.13047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.330 6.330 3 C 0.042 3.958 4 C 0.437 3.563 5 F -0.175 7.175 6 F -0.173 7.173 7 F -0.181 7.181 8 C -0.137 4.137 9 C 0.145 3.855 10 H 0.114 0.886 11 N -0.701 5.701 12 C 0.411 3.589 13 N -0.537 5.537 14 C 0.155 3.845 15 C -0.232 4.232 16 C -0.059 4.059 17 O -0.532 6.532 18 Si 0.679 3.321 19 C -0.005 4.005 20 C -0.239 4.239 21 C -0.162 4.162 22 H 0.104 0.896 23 H 0.055 0.945 24 H 0.053 0.947 25 H 0.123 0.877 26 H 0.102 0.898 27 H 0.411 0.589 28 H 0.156 0.844 29 H 0.117 0.883 30 H 0.375 0.625 31 H -0.256 1.256 32 H -0.258 1.258 33 H 0.136 0.864 34 H 0.135 0.865 35 H 0.099 0.901 36 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.352 0.896 -0.073 0.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.248 6.248 3 C -0.001 4.001 4 C 0.383 3.617 5 F -0.156 7.156 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.176 4.176 9 C 0.037 3.963 10 H 0.132 0.868 11 N -0.333 5.333 12 C 0.175 3.825 13 N -0.254 5.254 14 C -0.002 4.002 15 C -0.237 4.237 16 C -0.170 4.170 17 O -0.338 6.338 18 Si 0.581 3.419 19 C -0.030 4.030 20 C -0.264 4.264 21 C -0.200 4.200 22 H 0.122 0.878 23 H 0.074 0.926 24 H 0.072 0.928 25 H 0.141 0.859 26 H 0.120 0.880 27 H 0.249 0.751 28 H 0.172 0.828 29 H 0.135 0.865 30 H 0.223 0.777 31 H -0.181 1.181 32 H -0.183 1.183 33 H 0.154 0.846 34 H 0.153 0.847 35 H 0.117 0.883 36 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -0.603 -0.040 0.107 0.613 hybrid contribution -0.486 1.531 0.246 1.625 sum -1.088 1.492 0.353 1.880 Atomic orbital electron populations 1.23170 0.79410 1.04499 1.01568 1.88121 1.21106 1.21682 1.93843 1.24007 0.99869 0.86370 0.89849 1.21150 0.74319 0.78694 0.87565 1.93181 1.69324 1.56496 1.96615 1.93228 1.94765 1.70849 1.56626 1.93197 1.36592 1.89648 1.96848 1.23879 0.91362 1.06136 0.96219 1.21575 0.96550 0.85895 0.92243 0.86816 1.44129 1.27724 1.22128 1.39343 1.18339 0.87782 0.89009 0.87338 1.67140 1.32538 1.13952 1.11732 1.22282 0.88808 0.97706 0.91422 1.20938 1.00041 0.98779 1.03944 1.24754 1.02886 1.03364 0.86002 1.86597 1.35747 1.66593 1.44867 0.95091 0.79571 0.79204 0.88045 1.21207 0.97178 0.93593 0.91058 1.21498 0.97463 1.03037 1.04368 1.24006 1.00449 1.01598 0.93964 0.87810 0.92639 0.92787 0.85935 0.87953 0.75112 0.82767 0.86550 0.77737 1.18063 1.18341 0.84596 0.84741 0.88272 0.86213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.30 101.05 1.04 1.02 16 2 O -0.33 0.10 9.09 -35.23 -0.32 -0.22 16 3 C 0.04 -0.06 0.85 -89.67 -0.08 -0.13 16 4 C 0.44 0.13 2.53 37.16 0.09 0.22 16 5 F -0.17 -0.03 15.81 2.25 0.04 0.01 16 6 F -0.17 -0.40 17.11 2.25 0.04 -0.36 16 7 F -0.18 -0.13 15.40 2.25 0.03 -0.10 16 8 C -0.14 0.35 7.15 -25.78 -0.18 0.16 16 9 C 0.14 -0.43 4.07 -67.12 -0.27 -0.71 16 10 H 0.11 -0.50 6.17 -51.93 -0.32 -0.82 16 11 N -0.70 0.58 5.31 -53.14 -0.28 0.30 16 12 C 0.41 0.38 7.65 -155.02 -1.19 -0.80 16 13 N -0.54 -1.23 10.39 -12.44 -0.13 -1.36 16 14 C 0.16 0.13 9.84 -17.57 -0.17 -0.05 16 15 C -0.23 -0.01 5.36 -104.46 -0.56 -0.57 16 16 C -0.06 0.03 2.82 36.00 0.10 0.14 16 17 O -0.53 -0.46 12.84 -35.23 -0.45 -0.91 16 18 Si 0.68 -0.75 29.91 -169.99 -5.08 -5.84 16 19 C 0.00 0.00 9.83 -39.32 -0.39 -0.39 16 20 C -0.24 0.08 9.28 -39.22 -0.36 -0.28 16 21 C -0.16 0.54 6.65 -25.92 -0.17 0.37 16 22 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 23 H 0.06 -0.18 6.55 -51.92 -0.34 -0.52 16 24 H 0.05 -0.07 6.69 -51.93 -0.35 -0.41 16 25 H 0.12 -0.48 7.03 -51.93 -0.36 -0.84 16 26 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.41 -0.15 7.75 -40.82 -0.32 -0.47 16 28 H 0.16 -0.13 4.85 -52.48 -0.25 -0.39 16 29 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 30 H 0.38 -0.67 8.70 45.56 0.40 -0.27 16 31 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 32 H -0.26 -0.20 7.01 56.52 0.40 0.20 16 33 H 0.14 -0.18 8.06 -52.49 -0.42 -0.60 16 34 H 0.13 -0.34 6.06 -52.49 -0.32 -0.66 16 35 H 0.10 -0.35 6.67 -51.93 -0.35 -0.70 16 36 H 0.12 -0.54 8.04 -51.93 -0.42 -0.96 16 LS Contribution 307.11 15.07 4.63 4.63 Total: 0.00 -6.15 307.11 -7.18 -13.33 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -3.51 Total: -8.47 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -2.14 Total: -1.02 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: -0.41 Total: -1.06 kcal Atomic # 8 Polarization: -0.35 SS G_CDS: -0.77 Total: -1.13 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.11 Total: -0.45 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.08 Total: -5.84 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -6.15 -7.18 -13.33 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17312454_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.528 kcal (2) G-P(sol) polarization free energy of solvation -6.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.333 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.860 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds